Clarias gariepinus (North African catfish): 128531716
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Entry
128531716 CDS
T10780
Symbol
acsl4a
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 4
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00061
Fatty acid biosynthesis
cgar00071
Fatty acid degradation
cgar01100
Metabolic pathways
cgar01212
Fatty acid metabolism
cgar03320
PPAR signaling pathway
cgar04146
Peroxisome
cgar04216
Ferroptosis
cgar04920
Adipocytokine signaling pathway
Module
cgar_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
128531716 (acsl4a)
00071 Fatty acid degradation
128531716 (acsl4a)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
128531716 (acsl4a)
09143 Cell growth and death
04216 Ferroptosis
128531716 (acsl4a)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
128531716 (acsl4a)
03320 PPAR signaling pathway
128531716 (acsl4a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cgar01004
]
128531716 (acsl4a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128531716 (acsl4a)
Enzymes [BR:
cgar01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
128531716 (acsl4a)
Lipid biosynthesis proteins [BR:
cgar01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
128531716 (acsl4a)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of breast milk
128531716 (acsl4a)
Exosomal proteins of breast cancer cells
128531716 (acsl4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
128531716
NCBI-ProteinID:
XP_053361791
LinkDB
All DBs
Position
10:complement(22557778..22569271)
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AA seq
709 aa
AA seq
DB search
MAMKMDLSSVLLLPVHMLVWLYSAVSFLPWYFVTGAQKKIAQAKRVKAKSTYGKIEGPYR
SVDRFDSLALMDFDGKDTLDKLFDHAVQRFNKLRCLGTRAVLSEENETQPGGKVFKKLIL
GDYKWMTYQELDAEVTHLGSGLAALGQQPKHTIAIFCETRAEWMITAQACFRRNFPLVTF
YATLGEDAVAFGLNECGATHLVTSSELLETKLKSVLPQIPHLRHIIYVDNKSLSTAGYPE
HIQIHNMQFVKELGAKPENLNREIVKPVPSDLAVIMYTSGSTGRPKGVVIVHSNLIAGMT
GQCERIPGLGTKDTYIAYLPLAHVLEMTAEISCVAYGCKIGYSSPQTLSDQSTKIKKGSK
GDCTVLKPTLMAAVPEIMDRIKKNVLSKVQEMNVVQRTLFNLAYNYKLEQIKNGYDAPLC
NMMFKKVRALLGGNVRMMLSGGAPLSSSTQRFMNICFCCPVGQGYGLTETCGAGTITEVT
DYSTGRVGAPLICCEVKVRDWAEGGYTKLDKPHPRGEIIIGGQNVTMGYYRSDTTSEEFF
IDENGQRWFCTGDIGEIHPDGCLQIVDRKKDLVKLQAGEYVSLGKVESALKNCSLIDNIC
AYANSDQNYVISFVVPNPKQLTALAHQKGIEGTWTDICNHPVMEMEVLREIKEVANSIKL
QRFEIPIKVRLSPDPWTPETGLVTDAFKLKRKELKNHYFNDIERMYGRK
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggctatgaaaatggacctcagcagtgtcctcctcctccctgtccacatgctggtatgg
ctgtactcggcggtgagcttcctgccctggtactttgtaacaggggcccagaagaagatc
gctcaggccaaacgggtcaaggccaaatccacctacggtaaaatagaggggccgtatcgc
tccgtggaccgcttcgactcgctcgctctgatggacttcgatggaaaagacacactggac
aaactgttcgatcatgcagtgcagcgctttaacaagttgcgctgcctgggaacgcgagca
gtcctgagcgaagagaacgaaacccagcctggtggcaaagtcttcaagaagctgatcttg
ggagactacaagtggatgacgtatcaggagctggatgccgaagtcactcacctcggcagt
ggccttgcagcactcggccagcagccaaaacacaccattgctatattctgtgagacgcgt
gcggagtggatgatcaccgctcaggcctgcttcagacgcaatttcccactggtgacattt
tacgcaactctcggagaggacgctgtggccttcggactcaatgagtgtggtgcgactcac
ttggtcactagctcggagcttctggaaaccaaattaaagagcgtccttcctcaaatccct
cacctgaggcacatcatttacgtggacaacaagagcctcagcactgcaggatatccagaa
cacattcagatccacaacatgcagtttgtaaaggagctgggagcaaagcctgaaaatttg
aacagggagatagtcaaacccgtcccgtcagacctggcggtcatcatgtacaccagcggc
tcaacgggacgacccaaaggcgtcgtgatcgtccatagcaatctcatcgcaggcatgaca
ggccagtgtgagaggatcccaggtctgggcaccaaggacacgtacatagcttatttgccc
ctggcccatgtgctggagatgactgcggagatctcgtgcgtagcgtacggctgcaagatc
ggttactcctccccacagacactctctgatcagtctactaaaattaaaaagggcagtaag
ggcgactgcacagtcctaaagccgacactaatggcagcggtaccggaaataatggatcgc
atcaagaaaaatgtcttgagcaaagtgcaggagatgaacgttgtccagaggaccctgttc
aacctggcctacaactacaagctggagcagatcaagaatggctatgatgctccgctttgc
aacatgatgtttaagaaggtgagggctctgttgggaggaaacgtgcgaatgatgctgtca
ggcggggctcctctctcctcctccacacagcgcttcatgaacatctgcttctgctgccct
gtgggtcagggttacggcctcaccgagacctgtggagcaggcaccatcactgaagtgacg
gattacagcacaggacgagtcggcgcccctctcatttgctgtgaggttaaagtccgagac
tgggcagaaggtggatatacaaagctggacaagcctcacccacgaggagagattataatt
ggaggtcagaatgtgaccatgggctactacaggagcgacactaccagtgaggagttcttc
atagatgaaaacgggcagcgttggttctgcactggagatataggagagattcatcctgat
ggttgtctgcagattgtggaccgtaagaaggaccttgtgaaactgcaggctggagaatat
gtgtctctgggcaaagttgagtctgcactgaaaaactgctccctcattgacaacatctgc
gcatacgccaacagtgatcagaactacgtgatcagctttgtggtaccaaacccaaagcag
ctgaccgctctggctcatcagaagggcatcgaaggcacgtggacggacatctgcaaccat
ccagttatggagatggaagtcttgagggaaattaaagaagttgctaattcaatcaagctg
cagcgctttgagatcccaataaaagttcgcctcagcccagacccgtggactcctgaaacc
ggcctggtcacggatgcgtttaagctgaaaagaaaggagctgaagaaccactatttcaac
gacatcgagcgaatgtacggtcgcaaataa
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