Clarias gariepinus (North African catfish): 128531722
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Entry
128531722 CDS
T10780
Symbol
itga6l
Name
(RefSeq) integrin alpha-6
KO
K06485
integrin alpha 6
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04382
Cornified envelope formation
cgar04510
Focal adhesion
cgar04512
ECM-receptor interaction
cgar04514
Cell adhesion molecule (CAM) interaction
cgar04518
Integrin signaling
cgar04810
Regulation of actin cytoskeleton
cgar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128531722 (itga6l)
04514 Cell adhesion molecule (CAM) interaction
128531722 (itga6l)
04518 Integrin signaling
128531722 (itga6l)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128531722 (itga6l)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128531722 (itga6l)
04810 Regulation of actin cytoskeleton
128531722 (itga6l)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
128531722 (itga6l)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128531722 (itga6l)
04515 Cell adhesion molecules [BR:
cgar04515
]
128531722 (itga6l)
04090 CD molecules [BR:
cgar04090
]
128531722 (itga6l)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128531722 (itga6l)
Exosomal proteins of breast milk
128531722 (itga6l)
Cell adhesion molecules [BR:
cgar04515
]
Integrins
Integrin alpha subunits
128531722 (itga6l)
CD molecules [BR:
cgar04090
]
Proteins
128531722 (itga6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
DUF4825
Motif
Other DBs
NCBI-GeneID:
128531722
NCBI-ProteinID:
XP_053361805
LinkDB
All DBs
Position
10:complement(4680816..4704389)
Genome browser
AA seq
1038 aa
AA seq
DB search
METSRITLIISLCFLSSLGPHHASAFNLDNTNVLRKNGDAESLFGYSLEMHQQLKPTDQQ
LLLIGAPHAKALPSQKANITGGLYRCKFTTQQDDCERISIDTEDARPGQGFDHRENQWMG
VYVKSQGPGGKVVVCAHRYQQWIHNNRLVLGRCFILEQNLAVEDTRTFCRNRPIAKDQFG
YCQQGVSAAFTKDKKYIVFSGPGAYDWKGTVRMEPIEDFLLDSYETGEENLFSEGNIPLT
LSSYLGFALDSGTNLIKKGEQVIVAGAPRSNLSGEILILKPEAVEDQRSLRVVHILHGPG
LASSFGYSLAVIDLNADGWDDLVVGAPQYSPTDMDAGTGGAVYIYINRRDGQDWDRLQPD
ILTGNKDSMFGIAVEHIGDINQDGYNDFAVGAPYDNDGDGAAYIYLGRTGPFSQKVNQVL
QAKGHKIKLFGYSLTGNMDIDGNGYPDLAVGSLSDSVLIYRAKPVISIEKSLTITPTEMN
FQDQDCQKGHCIITAESCFSYTTYPETYSPRLQMVYKLNADKHWVQDGHKSRLVFQSNHK
GNIVLPAQGQKQCVQSHLRLRSNTENKLTEIPVSVSVSLPQYSPPQKLSRSSLPALQPSL
NDLQPQESTAKFMFLNPGCGRDNICQSNLQLQYSFCTRDQHRDSCSPLAKQDGVAVIFPG
AENTALELTITNHDGDDAHLAQLIANFPESLPLSSFILKQDSTVNVQCDIEESKTRAECN
IGNPLKRNAEVTFYLLLNTDRLTPSITDVNVTLNLQTISVQNISEIVAEAQVFFELYLQV
FGLAKPSQLYYPETGKNKSNEEIGEPVQYEFTISNMGRPLKSFASATLNIQWPKENKEGK
GLLYLLEITGPNNQSIPCSPASEINPLKRTQEVRFREKRQAEGEAKVSALSTEGLLSLFG
SKRHYKYLTCDDELKCVEIRCPLKAADRTAVTLHSRLWSSTFVEEYRSLNYLDIVLNASL
SLDGSQKNIRLQQSQTQVRLTVFPEKKPSFLSRDPFWVILLSVVLALLLLSVLIYFLSKL
GCLDCAMCTEDQEYHTVK
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atggagacgtcaagaataacactgatcattagcctgtgcttcctcagtagcctgggtccg
caccatgcatctgcttttaacctggataataccaacgttctgaggaaaaacggagatgcg
gagagtctgttcggatattcactcgaaatgcaccaacaactcaaacccacagatcagcaa
ctcttactcatcggtgctccacatgcgaaagccttaccgagtcagaaagccaacataact
ggaggtctctatcgctgtaagttcacaacacagcaggatgactgtgaacggatctccata
gatactgaagatgcaaggccaggacagggatttgatcaccgggaaaaccagtggatgggt
gtttatgtgaaaagccaggggccaggaggaaaagtggtggtttgtgctcaccgctaccag
cagtggatacataacaatcggctggtactgggcaggtgcttcattttggaacagaacttg
gctgttgaagacacgaggacgttctgcagaaaccgacccatagctaaggaccagttcggt
tactgtcagcagggcgtctctgcagctttcaccaaagacaagaagtatatagtgttctca
gggccaggtgcttacgactggaaaggtactgtccgcatggagcctattgaagactttctt
ctagattcctacgaaactggagaagagaatctgttcagtgaagggaacatccctttgacc
ctcagcagttatttaggttttgctctggactcaggaacaaatctgataaagaaaggagag
caggttatagtggcaggagcaccacgctccaatctcagtggagaaattcttatcttaaag
cctgaagctgtggaagatcagaggagtttgcgcgtagttcatattctccatggcccggga
ttggcgtcctcttttggctactcactggctgtaattgaccttaatgcagacggatgggac
gatcttgtagttggtgctcctcagtacagcccgacggacatggacgcaggaacaggaggc
gctgtttacatctacataaaccgtcgggacgggcaagactgggaccggttacagccagac
attctcactggcaacaaagactccatgtttggaatagctgtggaacacattggggacatc
aatcaggacggatacaatgattttgcagttggagccccttatgataatgatggtgatgga
gcagcgtacatttacctcggcagaactggacctttttcacaaaaagtcaaccaagtttta
caggctaaaggccataaaatcaagctgttcggctattctctaactggaaacatggatata
gatgggaacggctacccagacctggctgtgggctcactttctgacagtgtacttatctac
agagctaaaccagtgattagcattgagaaatctttgacaataacgcctacagagatgaac
tttcaagatcaggactgccagaaaggtcactgcattataacagctgaatcctgtttctcc
tacacgacctatccagagacatatagccccagactgcagatggtctacaagctgaacgct
gataaacattgggttcaagacggccataagtcccgcttagtcttccagagtaatcacaaa
ggaaacattgtgctgccggcgcaaggtcaaaaacaatgtgtgcaaagtcacctccgactc
cggtccaatacagagaacaagcttacagaaatccctgttagcgtgtcggtgtctctgccg
cagtacagtcctcctcagaaactgagccgcagttctctacctgctcttcaaccatcgctc
aatgatctccagcctcaagaaagcacagctaaattcatgtttttgaaccctggctgtggg
agagataatatctgtcagagtaacctgcagctgcagtacagcttctgcaccagagaccaa
catcgggactcgtgttcaccactggccaaacaggatggagtggcagtaatcttccccggt
gctgagaacacagccctggagctcactataacaaatcacgatggagatgacgctcatctc
gctcaactgatcgcaaactttccagaatctcttcctttatcatcgttcatcctcaaacaa
gatagcacagtgaacgtgcagtgtgatatagaagagagtaaaacgagagcggaatgtaat
ataggaaatcccttgaaaagaaatgcagaggtaacattttatctcttgctaaacacggat
cgtctgaccccaagcataacggacgtcaacgtgaccctgaacctccagacgatcagtgtg
caaaatatttcagaaattgttgcagaggcacaggttttctttgagctgtatctgcaagtg
tttggcctggcgaaaccttctcagctgtactatccagaaacagggaagaacaaatcgaat
gaggagatcggagaacctgtgcagtacgagtttacaatcagtaacatgggtcgacctctg
aagtccttcgcctccgcgacccttaacatccagtggccgaaggagaataaagaaggcaag
gggctcctgtacctgctggagatcaccggaccgaacaaccagagcattccctgcagccca
gcttcggaaatcaaccctctcaaacgtactcaggaggtgaggttcagagaaaaacggcaa
gcagaaggtgaagcgaaggtttcagctctcagcactgaaggactcctgtctttatttgga
agcaaacgacattacaaatatctgacatgtgatgatgagttaaagtgtgtggagatcaga
tgccccctaaaggcagcagacagaactgcagttaccctgcactcaagactgtggagcagc
acttttgttgaggaataccgttctctgaattatctagacattgtcctaaatgcttctctc
agtcttgacggatctcaaaagaacatccggcttcagcaatctcaaactcaggtcagacta
acagtgttcccagaaaaaaagccgtcttttctcagtcgagaccccttttgggtgattctg
ctcagtgtggtgctcgcactcttgctactcagcgtcctgatctacttcctgtccaagctg
ggatgcctcgactgtgcaatgtgtaccgaagatcaagaatatcacaccgtcaagtaa
DBGET
integrated database retrieval system
