Clarias gariepinus (North African catfish): 128531755
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Entry
128531755 CDS
T10780
Name
(RefSeq) uncharacterized protein LOC128531755
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128531755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128531755
Membrane trafficking [BR:
cgar04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
128531755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
DUF4635
Motif
Other DBs
NCBI-GeneID:
128531755
NCBI-ProteinID:
XP_053361857
LinkDB
All DBs
Position
10:complement(25802717..25815465)
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AA seq
1319 aa
AA seq
DB search
MPLISLDDEDQRWVPTHVNVTVLRARALRTKGKQGSRYVYTVIQLGKTKYTTGLTEKAAE
PEWNEECSLELQPGLLECVGAHPAKSGDLILSVMLRVLIGLDVFLGEAVVPLDKVFQRGT
CPRNEWLKLRSKPGRKEKERGELQITIQFTRNNMTASMYDLTIQDKPRSAFGKLKDRVTG
KKRGDVESSSAILPGRYAALSGSTSQPFQEDGGVEEPVQDEYTDEGKSKVKGFFLKGKLQ
KNSDTRSCSSLASDSSLGSSTGDPFVPIELCSTPVYSSRVMEPFRADADGGVKVMTHKRA
HSDEASKITVASRPSTAVESVKGQNTLLSKSSLCINGSHVYSEPVYSKGPGSLPIKRTLL
EKCSPLSRSLQNLTRRSEDTQRRGSIDKSKKELEGEAEGCSAQTVGITLSEGRPVHATAP
LVMTSSTTDISDKGKKLRKTLFSSGRSDSLPAKPEQGQEGRLRGWFGSSDAQNKPRLGVP
PKVESIPETSSSHPPCYPALPPRSLPLVSTTSHMPSSPVGPLSNPFSHSSPSPTSISPTN
PFLTRLQRNPFFEELIAEEALKSPPAISGYQNSPFNHYPAFPVRTGLPSTIRDGTPNKLS
PIKRERPRGVARQRSLPALMPGTPEAATVNSNNAMQASRPLSESRGERDEFEALATSRLK
SPVGTPTRPSSVTIPPSPPSPYPIEYCSIKQKMAIVADERLSKDCILPALTSRRTGRTPL
PFQERCSDSWLDRAQELAVQKEACLLFQTDLASLRNRERQRETNTKVSQLGKNVHCANLK
ENVNVHPSSHTVPKPRDGNLNILENGQDKILNDLQDGYEHIQENSQYSANDRTVPSTPFC
LSDCDTTISESLCSDYQVPINPESSSELKPFPEQQIENIITTPDFNNNTNDTSQFAFIDC
DSSPSDANQTTFGIINKDRNKGILSGNGFSSVPPEDFSNRMAEQEPLSPKESPDTVVVVV
ASGMSSNNHYKKPCDELEQNSLQLNSKLTVSVESGHPNHKESSVSPPTIHQQDRDDGSVT
AQHKPGATEDNAGLDALHEVGCHLIYDKSKIKAAELQPEADSSDAHVAERNKISESPSSL
TDGISFKDLHAQVAPRGSSSPSKTEVKSARIRTCPMRNHPKTDPSATLSSDPSQSSLVHR
VTTRPGLGSAPAEASYNASTLQLQATAEPTLTPEEAEAASSRPPTEESSPHPVKPLTNIG
VPGEKKSVLSKLRSSIHPGRSTQQNITESEKQQVCMSEAHSHYQGLSNMELIALLLQQEI
DAERQREESELQATLLEKREAELKKLKVQVRDLEDYIDKLLVRIMEQTPTLLQVRGRPK
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgatcagcctggacgatgaggatcagaggtgggttccgacccacgtcaacgtg
acggtcctccgggccagggctctgcgcaccaagggcaagcagggcagccgctatgtgtac
accgtcatccagctgggcaagaccaagtacaccacgggactgacggagaaagcggccgag
cccgagtggaatgaggagtgctctctggagctgcagcccggcctgctggagtgtgtgggg
gcgcatcccgccaagagcggggatctgatcctcagcgtcatgctccgggtgctgatcgga
ctcgacgtgttcctcggggaagccgtggtgcctttggataaggtgtttcagcgagggaca
tgtcctaggaacgagtggcttaagttgcgctccaaacctgggaggaaggagaaggaacga
ggagaactgcaaatcaccatccagttcactcgcaataacatgacggccagcatgtacgac
ctgaccatccaggacaagcctcgctccgccttcggcaagttgaaggaccgcgtcactggc
aagaaaagaggggacgtagagtcctcgtcagcgatcctccctggccgctatgccgctctg
tcgggttcgacaagtcagcctttccaggaggatggtggtgtggaggagccggtacaggat
gagtatactgacgaaggcaagagcaaggtgaagggtttctttctgaagggaaagttacag
aagaactcagacacgcgatcctgttcatcgttggcctcagacagcagtttggggtcatcc
acgggggatccttttgttcccatcgagctgtgcagcaccccggtctacagcagcagagtt
atggagcctttccgcgctgatgcagacgggggagtgaaggtgatgacgcacaagcgcgcg
cacagcgacgaggccagtaagatcacagttgcctcacgtcccagtacggctgttgagagt
gtaaaaggccagaacacgctgctctccaagtccagcctctgcatcaatggcagccatgtt
tattctgagcccgtctactccaaaggacctgggagtcttccgatcaagcgtacgctacta
gagaaatgctcccctttatcacgctcgctgcagaatctcacccgccgcagcgaagacacg
cagaggcgtggctccattgacaagagcaaaaaggagctcgagggagaagcggaaggctgc
tcagcccaaacagtaggaatcaccctatcagaggggaggccggtgcatgccactgccccc
ttagtgatgacgtcttccactacagatatctcagataaagggaagaagctcaggaagact
ctgttctccagcgggagaagtgactccctcccagccaaacctgagcagggtcaggaggga
cgtctgcgtggctggttcggttccagcgacgcccaaaacaagccaaggctgggagttcca
cctaaagtagaaagcatcccagaaacatcctcttcccaccctccctgctaccccgcccta
ccaccacggtctcttcccctagtttctactactagccatatgccgtcctctcctgttggt
cctctatctaatccattctcccattcctccccttcaccaacctccatctcccctaccaac
cctttcctcacacggctgcagaggaaccccttttttgaggagctcatagctgaggaagct
ttaaaatctcctcctgcgatttccggctaccaaaactctccattcaaccattacccagca
ttccctgtgaggactggccttccaagcactatccgtgatggcacaccaaacaaactgtct
cctataaagagagagagacctcggggtgtcgctcgacagagatccttgcctgctttaatg
cctgggacaccagaggcagccactgtgaactctaataatgcaatgcaagcaagtcgtcct
ttatctgagagtaggggggaacgggatgaattcgaagctttggccaccagccgtcttaaa
tcgccagttggaactcccactcgtccatcctccgtcacaatccctccttcacctcctagc
ccttatccaatcgaatactgcagcattaagcaaaaaatggcgattgtagctgatgaaaga
ctctccaaagactgcattttacctgccttaacctcacggaggacaggcaggaccccactg
ccctttcaggagaggtgctcagacagctggctagaccgagcacaggaacttgcagtccag
aaagaagcttgcctgctcttccagacagatttggcttcactacgaaatcgagagagacag
agagagactaacaccaaagtttctcaattaggaaaaaatgtgcactgtgctaacctgaag
gagaatgtgaatgttcatccatcttcacatactgtaccaaagcccagagatggaaatctg
aacattttagaaaatggccaagataaaattttgaacgatttgcaagatggttatgaacat
attcaggaaaactcccagtattctgcaaatgatcgcactgtgcccagtacaccattttgc
ctctcagactgcgacacgactataagcgagtcactgtgtagtgactatcaggtcccgata
aatccagagtcgtcctccgaactgaaaccttttcctgaacaacagatcgagaatataatc
accaccccagatttcaataataatacaaatgacacttctcagtttgcgtttattgattgt
gacagctcaccttcagatgcgaaccagactactttcggaataataaataaagacagaaac
aagggaattttgtcgggaaatgggttctcctcagtgccccctgaagatttctcaaacaga
atggcagaacaagaaccactttccccaaaggaatctccagatactgttgttgttgttgtt
gctagtggaatgtccagcaataaccattataaaaaaccatgtgacgaattagaacaaaac
agcctccaactcaattcaaaactcactgtgagtgttgaatcagggcatcccaatcacaaa
gaaagctctgtaagtccaccaacaatccaccaacaagacagagatgacgggagtgtgacg
gcacagcataaacctggggcgacagaggacaatgcaggcttagatgcgctgcatgaagta
ggatgtcatctcatttatgacaagagtaagattaaagcagcagaactccagccagaagca
gatagttccgatgctcatgttgcagagagaaacaagatcagcgagtcaccttcgtctcta
acagatggcatcagttttaaagacttgcatgcccaagtagcaccaagaggctcgagcagc
ccttccaagactgaagtcaaatcagcacgcattagaacatgtcccatgagaaaccacccc
aagactgaccccagtgcaacactgagctctgaccccagccagtcctcgcttgtgcatcgt
gtaaccacaaggcccggcttgggaagcgctccggccgaggcctcctacaacgcctcaaca
ctccagctgcaggctactgcagagcccacacttaccccagaggaggcagaagcagctagc
agtcgccctcccactgaggagagcagtccccacccggtcaagcctctgaccaacatagga
gtgccaggagagaagaaatctgtgctgtcgaaactgcgctcctccatccaccctggacgc
tccacacagcagaacatcaccgagtcggagaaacaacaggtgtgcatgtcagaggcccac
tctcactaccagggtctgagcaacatggagctgatcgctctcctgctgcagcaagagatc
gatgcggagagacagcgggaagagtccgagctccaggccacgctgttggaaaagcgtgag
gccgagctaaagaagctaaaggtccaggtgcgagatttagaggactacatcgacaagctg
ttggtgcgcatcatggagcagactcccaccttgctgcaggtacgcggcaggcccaagtga
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