Clarias gariepinus (North African catfish): 128531808
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Entry
128531808 CDS
T10780
Symbol
pitx2
Name
(RefSeq) pituitary homeobox 2 isoform X1
KO
K04686
paired-like homeodomain transcription factor 2
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
128531808 (pitx2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128531808 (pitx2)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
128531808 (pitx2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
XRCC4_C
Motif
Other DBs
NCBI-GeneID:
128531808
NCBI-ProteinID:
XP_053361931
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All DBs
Position
10:1582843..1594217
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AA seq
277 aa
AA seq
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MDSHCRKLVSTCVQLEKEKVQSKSEDSSDDPSKKKRQRRQRTHFTSQQLQELEATFQRNR
YPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCKNGFGAQFNGLVQPYD
DVYPSYTYNNWAAAAKGLAPASLSAKSFPFFNSMNSISPLSSQAMFSAAPPPPPPPPPAP
SSISSMSMSMSSGMAVPASGLNGLNNLNNLGNASLNSPAAACPYAPPTPPYVYRDTCNSS
LASLRLKAKQHSSFGYAGVQNAATNLSACQYAVDRPV
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggattctcactgcagaaaacttgtctcaacgtgtgtgcagctggaaaaagagaaagtc
cagagtaaaagcgaggactctagcgatgatccgtcgaagaaaaagcggcagcggcggcag
aggacgcactttacgagccagcagctgcaggagctcgaggccacattccagcggaaccgt
tacccggacatgagcacgcgcgaggagatcgccgtctggaccaatctcactgaggcgcga
gtccgggtttggttcaagaaccgtcgcgccaaatggaggaagcgggagcgtaaccagcag
gccgagctctgtaagaacggcttcggcgcgcagtttaacggtttggtgcagccctacgac
gacgtgtacccgagctacacgtacaacaattgggcggcggcggctaaagggcttgcgccg
gcctcgctctcggccaagagcttccctttcttcaactcgatgaactccatcagcccactg
tcgtcccaggcgatgttctctgccgcaccgccgccgccgccgccgcctccgcccgcgcca
agctccatctcctccatgagcatgagcatgagctctggcatggccgtgcccgcgtccggt
ctcaacggtctcaacaacctcaacaacctcggtaacgcgtctctcaactcgcccgccgcc
gcgtgtccgtacgccccaccgactccgccctacgtctaccgggacacgtgtaactccagc
ctggcgagtcttagactcaaagccaagcagcactcgagcttcggctatgcgggagtccag
aacgccgccacgaacctcagcgcctgccagtacgccgtggacagacccgtgtag
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