Clarias gariepinus (North African catfish): 128531846
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Entry
128531846 CDS
T10780
Symbol
sh3tc2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
cgar Clarias gariepinus (North African catfish)
Brite
Membrane trafficking [BR:
cgar04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
128531846 (sh3tc2)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128531846
NCBI-ProteinID:
XP_053361978
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Position
10:complement(17123621..17137853)
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AA seq
1463 aa
AA seq
DB search
MKWNLHCTQADVSSVPRNMGNRPTHKDVTTPELNTVWEEYPYALTGANELFPGNDIMATG
DEEVETEAEVEDDGITGENYWKRKEVLRTVSLAVGDHFSSDVLLLFSGRRRSNLEPDSVL
QEALRTRLRVVESNSQDVIQLFKELSARLVSVHAEKDHFVITFKTVEEIWKFSTYLALGY
VARCLENFLCDQSFWLDPLLLSDVEICVTVDEEHLATLYLGLLLQEGSFFAKALDNSELC
IEEEDKLVYKKNDLVMMKDVGQQSMWEGILLSTGHHGLVPIHAMQPLPYPFYQWFLRKYN
GNAGGLSSTKGHSDQPVATGTCVAVLDHHPEAKDELHFSRGDLIEVEGLLISSLNMFIGR
HISSGQKGFVHMAHVRTENVKPLGQLVFLSEEERVALLQFNPCVEQCHTGLLDKLFSTDI
STVYRLDRLDDSDFTYIRNQPKQEQKTLADTRKSIILEHSGTPPYQSSPRPSFYASQSCL
DRDNEALSFSLEDTFREMDEYEDDPPFMDEGIWETEEAEFPDPILTLLNLDHFQDSFHAL
YDLSYSFLNTVFGGLPVDEVLLNLESLREGAKKGRMVWAHRRACFLLGRLCAKKLKYSQA
RVYFEEALNIPVEGFNDTPLLIALYTNLTAVYLKQKMTDKLPYTLHKASALILCLPLHNF
CSLDEFELLKPILCKAIVDDDKHLEARTCYLITCLFLQNKKIEEALPFVERLQFLNLILS
AEKGRPIGPVDLNWILCRLYHKKYLPHLSLASLSLDSAQDHSLDNGFQKIELFLKNSVRL
NPRWKDGSALLPVQVVVYLQQTLSIANCGEHLKTQRDLCLSLASVYQQYGTLERAVLYAQ
QAVQAGSHINEEEGFEASVLLAWLLVLTEEPDRAQSTLQPLLNAFSRTDSPTQCGVVHNL
LALCLHKQGRVIETAKNFHCALKISQENGNKHNEALALSNLGCLALSVGAPCLAERFLLR
SLHLFQFLSDKPTDEEHVQTLLWLGRSYKDRGESQKVRVCYEMGLLIAISAKNLHSQMVV
AKVLSRLYADLMLYGQCIIYYEHCVGLSRELKDKRLEGEYLEILSNLYLSLNTEKSSRKS
LDYSKQSLRISIDLGKKQEESETWLQVGRIYYLIHEDELADMYLQAAVKTALKINDPCFA
MNIYEEAGDVFFKGYRNRLAAVSFFRDGGLPFARCLKDVHSEFRLLCKLSELLLKEGQPQ
EALEYATHAVQISTSTGECLNERVSYHRLASIYYTLEQYEMAENYYLKSLTLCPTALEHA
EEARYYVKVYCRLADLTLHRIKDAFDAMGYFHLALAAALEDKKSLRARYIIYMKLAEIHA
NYLPDVELSQRYMDSARTLKRELAGPADSIDTDDEYMDHATTEHADAKSISHSSDGSGSS
NCCSRSSTLVGSYVVDTGHTISAQKDAGTEAVSADYICREDMDTSRPEGNNDGTGQHTNS
ETGHTDQTLHTSHTDSSLLCTEF
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggaacttacactgtacacaggcagatgtcagttcagttccaagaaatatgggt
aatagaccaacccataaagatgtaacaactcctgaactcaatacagtatgggaagagtac
ccatatgcactaacaggagccaatgagctctttccaggaaatgatatcatggccactgga
gatgaggaagtggaaacagaggctgaggtggaggatgatgggatcactggtgagaattac
tggaagaggaaggaagttcttcgcactgtctccttggctgtaggtgatcacttctcttca
gatgtgctactcctgttcagtgggagaaggcgctccaatttggagccagacagtgtgctg
caggaggcattgcgcactagactgagggtcgtagagagcaacagccaagacgtcattcag
ctttttaaagaactctctgcacgcttggtttcagtgcatgctgaaaaagaccattttgtc
attactttcaagacagtggaggaaatctggaagttttcaacatacctggctttaggatat
gtggcaagatgtttggagaacttcctgtgtgaccagtctttctggttggaccctcttttg
ctcagtgatgtagagatttgtgtgacagtagacgaggaacatctagctaccctctatctg
ggccttctacttcaggaaggttcattctttgctaaagctctggataacagtgagctttgt
atagaagaagaagacaaattggtctacaagaagaatgatcttgttatgatgaaggatgtt
ggacagcagtccatgtgggagggaatactgctgtccacaggtcaccatggccttgtgcct
attcatgcaatgcagcctctgccataccctttctaccagtggtttcttagaaagtacaat
ggcaatgcaggagggctttcatctacaaaaggacatagtgaccaacctgtagcaacagga
acttgcgtagcagtattggaccatcacccagaggctaaagatgaactgcacttcagtcga
ggagatctaatagaagtcgaaggcttgcttattagttcactgaacatgttcattgggaga
cacatttctagtggacagaaaggatttgtccacatggcccatgtgagaactgaaaatgtc
aaaccacttggacaattggtctttctgagtgaggaggagagagttgccctcttgcagttt
aacccctgtgttgaacagtgccacactggtctattggacaaactcttctccactgacatc
agcactgtatacagattagacagactggatgactcagattttacctatatcagaaaccaa
ccaaagcaagagcagaaaaccctagcagataccaggaagagcattatactggagcatagt
ggtaccccgccctatcaatcctcgcctcgaccttctttctatgcttctcagagttgtctt
gacagggacaatgaagccctttccttcagcctggaggacactttccgtgagatggatgag
tatgaggatgaccccccctttatggatgaaggcatctgggaaactgaagaagcagagttt
cctgaccccatcctaaccctcctcaacctggaccacttccaggattcttttcatgcactt
tatgacctctcctactccttcttaaatactgtctttggtggtcttccggtggatgaggtg
cttttgaatctggaaagcttgcgagaaggagcaaagaaaggcaggatggtgtgggctcat
cgacgagcctgcttccttttgggcaggttgtgtgccaaaaagctgaagtactcacaggct
cgtgtttactttgaggaggcgctaaatatccctgtagagggctttaatgacacacctctg
ttgattgctctgtataccaatctaacagctgtgtacctgaagcagaagatgacagacaag
ctgccttatacattacataaagcaagtgctcttatactgtgccttcctttgcataacttc
tgctctcttgatgagtttgaactgcttaagcccattctatgcaaagctattgttgacgat
gataagcatcttgaggcacggacttgttatttaatcacctgtctatttttgcaaaacaaa
aagattgaggaggccttaccttttgtagaaagacttcagttcctcaatctcattctctct
gcagaaaaaggaaggccaatagggccagtggaccttaactggattctatgtaggctgtac
cacaagaaatatctacctcacctttcattagcctctctcagtctcgattcagctcaggat
cattctttggataatggctttcaaaagattgaacttttcctgaagaactcagttagactg
aatcctcgttggaaggatggtagtgctctactcccagtccaggtggtagtttatcttcag
cagacattatctatagccaactgtggagaacacctaaagactcagagggacctttgcctg
agtttggccagtgtctaccagcagtatggaactttggaaagggcagttctctatgcccaa
caagcagtgcaggctgggagtcatatcaatgaggaggagggctttgaggcatcagtgctg
ctagcttggctcttagtgctcacagaagaaccagatagagcccaatctactttgcaacct
ctccttaacgcattcagtagaacagacagtccaacacaatgtggagtcgtccacaatctt
cttgcgctatgtcttcacaaacaggggagggttatagaaacagctaagaattttcactgt
gctctcaagatttcacaggaaaatggcaacaagcataatgaagcgctggctctgtctaac
ctggggtgtctcgccttatcagtgggagctccatgcctggcagagagatttttgctcagg
tctctacaccttttccagtttctctctgacaagcccacagatgaagaacatgtccagacg
ttgctatggctaggtagaagctacaaagataggggagaaagccaaaaagttagagtgtgc
tatgagatgggtcttctgattgccatcagtgccaagaacctgcacagtcagatggttgta
gcaaaggtgctcagtcgtctgtatgctgacttaatgttgtatgggcagtgtataatttac
tacgagcactgtgttgggctctcaagggaactgaaggataaacgtctggagggagagtac
ctggagattctaagtaatctctacctgtcacttaacactgaaaagtcttcacgaaagtcc
ctggactacagcaagcaaagcctaaggatttccatagatttaggaaagaaacaggaggaa
tcagagacatggctacaggtgggccggatctactacttgatacatgaggatgaattggca
gacatgtatcttcaggcagctgtaaagactgctctaaagataaatgatccatgctttgct
atgaacatttatgaagaagctggagatgtcttctttaaaggatacagaaaccgactggct
gccgtttcattttttagagatgggggtctgccatttgcaagatgtcttaaagatgtgcat
tcagagttcaggcttttgtgtaagctttctgaattgctactaaaggaaggccagccccag
gaggccctggagtatgctacacatgcagtgcaaatcagcacgtcgacaggtgaatgcctg
aatgagagagtttcctatcatcgtttagcttcaatctactatactctggagcagtatgag
atggccgagaattactatttgaagtctctgaccctgtgtcccactgctttggagcatgca
gaagaagctcgctactatgttaaagtatactgccgactagctgatctaaccctgcacagg
ataaaggatgcttttgatgccatgggatattttcacttagctctggcagcagctctggaa
gataaaaaaagccttcgggccaggtacataatttacatgaagctggctgagatccatgcg
aactacttacctgatgtggagctaagccaaaggtatatggacagtgcaagaaccctaaag
cgggagctggcaggacccgcagactcaattgacacagacgatgaatatatggaccatgcc
actacagagcatgctgatgctaaatctatcagtcattccagtgatgggtcagggagctca
aactgctgcagtagaagcagtactcttgtagggtcttatgtggtggacactggtcataca
ataagtgctcagaaggacgctgggacagaggctgtttctgctgattacatctgcagagag
gacatggacacctccaggccagaagggaataatgatgggactggacagcatacaaattct
gaaacaggtcacactgatcaaacactccataccagccacacagattctagcttgctatgt
acagaattttga
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