Clarias gariepinus (North African catfish): 128531928
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Entry
128531928 CDS
T10780
Symbol
tgfb5
Name
(RefSeq) transforming growth factor beta-2 proprotein
KO
K13376
transforming growth factor beta-2
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04010
MAPK signaling pathway
cgar04060
Cytokine-cytokine receptor interaction
cgar04068
FoxO signaling pathway
cgar04110
Cell cycle
cgar04218
Cellular senescence
cgar04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128531928 (tgfb5)
04350 TGF-beta signaling pathway
128531928 (tgfb5)
04068 FoxO signaling pathway
128531928 (tgfb5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
128531928 (tgfb5)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128531928 (tgfb5)
04218 Cellular senescence
128531928 (tgfb5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cgar04052
]
128531928 (tgfb5)
00536 Glycosaminoglycan binding proteins [BR:
cgar00536
]
128531928 (tgfb5)
Cytokines and neuropeptides [BR:
cgar04052
]
Cytokines
Transforming growth factors (RSTK binding)
128531928 (tgfb5)
Glycosaminoglycan binding proteins [BR:
cgar00536
]
Heparan sulfate / Heparin
Growth factors/receptors
128531928 (tgfb5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
CBM96
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
128531928
NCBI-ProteinID:
XP_053362091
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All DBs
Position
10:22308813..22314931
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AA seq
415 aa
AA seq
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MWFINIALLILKLSVSAEGFSTCQSYDLDDHKSKRIEAVRGQILSKLRIRSPPDPASAPQ
TESVPFEVMLLYNSTKDLLKERARHAESACERESSEEDYYAKEVQRVDMLPQRADSNAIN
TVPQSPYFRVVKFDVTNVDRNSSTLVKAEFRIYRVQNTNARASEQRVEIYQILKSDAVTG
SPHRYIDSRTVQPRAKGAWLSVDVTETVKEWMAYEEKNLGLMLSVHCPCCTFLPSPNNIL
LNKSEELEARFAGVDDDLIRPNRKPGLTKGQIEFSTKTPHLILTLLPTDRLENPNKKNRK
KRAAADATTCSRNADQSCCLRSLYIDFRRDLNWKWIHEPKGYKANFCAGNCPYLWSADNH
YNMILPLYNKMNPEASASPCCVPQDLEPLTIVYFLGRTPRVEQLSNMVVKSCKCR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtggttcatcaatatcgcgctgcttattctgaagttatccgtttcggcggagggcttt
tcgacgtgtcagtcgtatgacttggacgatcacaagtcgaagaggatagaggcggtgcgc
ggacagatcctgagcaagctgcgcatccgatcaccacccgatcccgcatcagccccgcag
acggagtcggttcccttcgaggtcatgctgctttataacagcaccaaggatctgctgaaa
gagcgcgcgcgccacgccgagtctgcgtgtgagcgcgagagcagcgaggaagattactac
gccaaagaggtgcagcgcgtggacatgctgcctcagcgcgcggactccaacgcaataaac
acagtgccacagagtccctacttcagagtggtaaagtttgacgtcaccaacgtagacagg
aattctagcacacttgtcaaggcagagtttcgcatatacagggtgcagaacacaaatgct
cgagcctcggagcagcgagtggaaatataccagattctgaagtcagacgctgttacaggt
tcccctcataggtatatagattccagaaccgtacagccacgagccaagggggcgtggctg
tctgttgacgtcaccgagactgtgaaagagtggatggcttatgaagagaagaacttgggt
ctgatgctcagtgttcattgtccatgctgcacgtttcttccatctccaaataatattttg
ctcaacaagagtgaggagttggaagctcgatttgcaggtgttgatgacgacctgatacgt
cctaaccggaaaccaggtctaactaaagggcagatagaatttagtactaaaacaccacac
cttatactgacactgctgcccacagaccgtttagagaaccctaacaagaagaaccgcaag
aagagggcagctgctgatgcaacgacatgctccaggaatgcagaccaaagctgttgttta
aggtctttgtacattgactttcgtcgggaccttaactggaaatggatccatgaaccaaaa
ggctacaaagccaatttctgtgctggcaattgtccctacttgtggagtgcagacaatcat
tataatatgattttgccactttataacaaaatgaatcctgaggcgtctgcatctccctgc
tgtgtgcctcaggacctggagcctctcactatcgtttacttcctcggtcggactccgcgg
gtggagcagctctcaaacatggtggtaaaatcctgcaaatgccgttga
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