Clarias gariepinus (North African catfish): 128531949
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Entry
128531949 CDS
T10780
Symbol
gpc3
Name
(RefSeq) glypican-3
KO
K08109
glypican 3
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cgar00535
]
128531949 (gpc3)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cgar00537
]
128531949 (gpc3)
Proteoglycans [BR:
cgar00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
128531949 (gpc3)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cgar00537
]
Others
128531949 (gpc3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glypican
DUF1512
Motif
Other DBs
NCBI-GeneID:
128531949
NCBI-ProteinID:
XP_053362116
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All DBs
Position
10:19289343..19414309
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AA seq
591 aa
AA seq
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MSLLSVTMCGVNFIGWWVLCALFLPLSEPSTQLLKCHEVRSSFQLLYPGTKWAPESPVSG
SDLQVCQSKGLTCCSRKMEERYLLTAKQNLESNLQASSAQLKLLIIQNAALFQEAFDMVL
RLGRNSTLTLLREEFPGLGSGANGAVTQLFLDMSLYILGSDANVDDMVTSFFSRLFPLAY
RRLLGNGAASGISDECLHRMWRDASAFGSHPKLMMTRLSRSLLATRFFLQALNLGIEVVN
TTQHLKAGRECGRALLRLWYCPLCQGLLEVRPCKPMCLVTMGTCLGGAAEVQPHWRTYVE
GLGTLAAAMRGEQDIEAVVLRLHVTIRMALRHIVGAKSRVNAQVSSMCSHTPQRKARAVI
SPVKQALVIQPVNFDPDETLSGQRREFIQSLRGFSFFYGNLGETLCSREPAALPNGSLCW
NGQEMTDKFSGPGPRKSHPHGSDTKHKHPEPVVSQIIDKLKHINQLLRMVTSPEKRWRAR
PGGGASRKDPDRLNQELEDDEGLESGDCDDEDECTGVSGLGPPTRRKRLRVFADLADNLA
MDDLTFHELLLTPRLSTDTHGGASVPGAADGLYVPARVFILSILLLLFGFQ
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgagccttttgtcagtgaccatgtgcggagtgaactttatcgggtggtgggttttatgc
gctttgtttttgccgctttctgagccgagcactcagctcctaaagtgccacgaagtgcgc
tcatccttccagctcctgtacccgggcaccaagtgggctccggagagccctgtctcaggc
tcagacctgcaagtgtgtcagtcgaaaggcctcacttgctgctcccgcaaaatggaagag
cgttacctcctcaccgccaaacagaacttggagtcgaatctgcaggcgagcagcgcccag
ctcaaactcctcatcatccagaatgcggccctctttcaagaggcctttgacatggtgttg
cgcttgggccgaaactctactctcaccctgctgagggaggagttcccaggcctgggtagt
ggagccaacggtgccgtcacccagcttttcctggacatgtctctctacatccttggttcc
gatgccaacgtggacgacatggtgacctccttcttctcgcgcctttttcctcttgcctac
cgccgcctcttgggcaacggggcagcgtcaggaatctcagatgaatgcttgcaccggatg
tggcgtgacgcatcagcatttggctctcaccctaagctaatgatgacacgcctctcacgt
tcactgctggccacgcgttttttccttcaggcgctgaacctgggcattgaggtggtgaac
accacgcagcaccttaaggcgggacgggagtgcggtcgggccctgctccgtctgtggtac
tgtccactgtgccaagggctgctggaagtgcgaccatgtaagccaatgtgcctggtaacg
atgggcacctgtcttgggggggcagctgaggtgcagccacattggaggacctacgtggag
ggactgggcactttggcagctgccatgcgaggagaacaggacattgaggcggtggtgctc
aggctccatgtcaccatccggatggctctcagacacattgtgggagccaagagcagagtg
aacgcccaggtgagcagcatgtgttctcacacaccccagcgcaaggctcgtgcagtgata
tcaccggtgaagcaggcgctagtcattcagcccgtcaactttgatccagacgagactctc
tctggacagcgcagagagttcattcagagtctgaggggcttcagtttcttctatggcaat
cttggggagacgctgtgcagccgagagccagcggcactccccaacggctccctctgctgg
aatgggcaggagatgacagacaagttttcagggccgggcccgaggaagagccaccctcac
ggatcagacaccaaacacaagcaccctgagcctgttgtcagccagatcattgacaaactc
aaacacatcaaccagctgttacgcatggtgacgtcgccggagaagcgatggagggctcgt
ccaggagggggcgcatcacggaaagatccagatcgactgaaccaagagttggaggatgac
gaaggtctggaaagcggtgactgtgacgatgaagacgaatgcactggcgtttcaggactc
gggccaccgacacgacgtaaacgtttacgtgttttcgccgatctggcggataatctggca
atggatgacttgacctttcacgagttgcttctgaccccgagactctccacagacacgcac
ggcggagcgtctgtacccggagcagcagacggcctgtacgtccctgctcgtgtcttcatc
ctgtccatcctcctccttctttttggatttcagtga
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