Clarias gariepinus (North African catfish): 128531980
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Entry
128531980 CDS
T10780
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgar04121
]
128531980 (rlim)
Enzymes [BR:
cgar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128531980 (rlim)
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128531980 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
128531980
NCBI-ProteinID:
XP_053362155
LinkDB
All DBs
Position
10:12273047..12286715
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AA seq
640 aa
AA seq
DB search
MEGSDNADQGSSEQADSQRRQQQDRLHREEAFYQFVNNLSEEDYRMMRDNNLLGTPGDIT
EEELLNRLHQIRDGPEQPNGSGGSGGSSSSNSPDVSLGESRVSEAEGTDEASNGETLLDW
LNTVRQTGNTTRSGHRGNQSWRAVSRTNPNSGDFRFSLEININRNIAEQQTQTDAERSDA
DQSRGDGSTSEPETPMEATEVVEEPVVEEMAVIVEPELPAPTSPNVTRPTSPQNQVPISQ
SLPQVERPSRGQIRARSPSPEQRRTRARTARSHLALSLDQLDGLPQARHGLPSRSPDPVP
EVQVDGSSRTRLHVLSRQNIQLESEETIASTQPQQAPQPHQETETPSGEGASSRRPPTIM
LDLQVRRVRPGEYRERDSIANRTRSRSQTSNNTFLYETERGGFRRTFSRSERAGVRTYVS
TIRIPIRRISDAGLEGATSMALHSMIRQIMTGFGELSYFMDSDSDSTDSSRGSNPAADLV
DALGNPDAGSPSAVPEPSPGTGGSNQSGSEAQTEEREDNVAALRESRARQRAPINLEEPG
SLPFLRLAHFFLLNDDDDDQPRGLTKEQIDNLSMRNFGESDALKTCSVCITEYAEGNKLR
KLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSANRESIV
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggagggttcggataacgcagatcaaggtagtagtgaacaggccgattcacaacgcagg
caacagcaggaccgccttcacagagaggaagcattctaccagtttgttaacaatctaagt
gaagaggactacaggatgatgagggacaacaatctccttggcactccaggcgatattact
gaggaagagttattgaatcgccttcatcaaattagagatggacctgaacagccaaacggt
agtggcggcagcggtgggagcagcagcagcaacagtcctgacgtcagtttgggggagtcc
agagtttcagaggcagagggtacagatgaagcatctaatggcgaaacccttcttgactgg
ctcaacactgtgcgtcaaactggcaacaccacaagaagcgggcataggggcaaccagtca
tggcgggctgtgagccgaactaatccaaatagtggagacttccgctttagcttagagatt
aacatcaatcgcaacatagcagagcagcaaacacagactgatgctgagcgttcagacgca
gaccaaagccgtggtgatggctctacatctgaacctgagacacctatggaggcaacagag
gtagttgaggagccagtggtggaggagatggctgttatagtcgaaccagagcttcctgct
cctactagccccaatgtaacccgcccaacaagccctcaaaatcaggtcccaatttctcag
agtctgcctcaagtagagcgcccaagtaggggccagattagagctcgtagcccaagccca
gaacagcgcagaaccagagctcgaacagctaggagtcatttagctctcagcctggaccaa
ttagatggccttccgcaggctcgccatggactaccctcacgaagtcctgatcctgtccca
gaagtacaggtagatggcagctctaggacacgactacatgttctttctcgacagaatata
cagttagaaagtgaggaaactatagcatctacacagccccaacaagcacctcagccccac
caggaaacagaaacaccttcaggagaaggcgcttcatctcgaaggcctccaacaataatg
ctggacttgcaggttcgtagggtgcgaccgggcgagtaccgtgagagggacagcattgcc
aaccgtacacgctctcgatcacagacctccaacaacactttcttgtatgagacagagcgt
ggaggatttcgcaggaccttttcacgttcagagagggcaggtgtaaggacatacgtcagc
actattcgtatccccatcaggaggatttcagacgcgggacttgaaggggccacctccatg
gctctacactccatgatccggcaaatcatgactggctttggtgaactcagctacttcatg
gactctgattcagactccacagactctagccgtggttcaaaccctgcggcagatctcgtt
gacgctctgggtaatccagatgctggaagtccctctgctgtgcctgagccatcacctggg
acaggaggctcaaatcagagtggctcagaagcacagactgaagagagggaggacaatgtt
gcagctctgagagagagcagggcaaggcagcgagctcctatcaacttagaggagccaggc
tctttgccctttctgcgacttgcacatttcttcttgctcaatgatgatgatgatgatcag
cccaggggcctcaccaaagagcaaattgataacctctccatgcgcaattttggtgagagt
gatgcactcaagacctgtagtgtgtgcattacagaatatgctgaaggcaacaagctacgt
aaacttccctgctctcatgagtaccatgtgcattgtattgaccgttggctttcagagaat
tcaacttgtcccatctgtcgtagagcagtccttgtttctgccaacagagagagcattgtc
tag
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