Clarias gariepinus (North African catfish): 128532065
Help
Entry
128532065 CDS
T10780
Symbol
lrit3a
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3a
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
cgar Clarias gariepinus (North African catfish)
Brite
Domain-containing proteins not elsewhere classified [BR:
cgar04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
128532065 (lrit3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128532065
NCBI-ProteinID:
XP_053362258
LinkDB
All DBs
Position
10:complement(1678924..1683234)
Genome browser
AA seq
627 aa
AA seq
DB search
MRCVLAVQVLLSCWSVVRPFCPSQCTCVFHGTRTVLCNDPDTAEIPVNVPLDTVKLRVEK
TAVRRVKNEAFYYLTELRYLWLTYNSISSVDPESFYNLKVLHELRLDGNQISTFPWESLR
EMPNLRVLDLHNNRLTSIPVEAAAHLVNITYLDLSSNKLNTLPSDLLDIWGPVSGMNPSG
STSEKIVLGIQDNMWYCDCRISKLIEISKMAEGPVVLIDQLVTCSGPENLAAVLFKRAEL
DQCIKPTVMTSATKITSSLSSNVLLRCDATGYPTPTLLWSREDGSALSSPVVQESPGEGV
RWSILSLQGIALKDTGVYRCKARNVAGSSESTIMLSLAEVNLTTPSPSFNISSSAVTEAI
NSITITSNTTTTTTTTTKPSLTTSPSIASKLNLGPGGGIQRSPPDKNIYRMEQSKISIKN
KSRKKGISYIRDVEVVEETGDSAVVTWMSEGFPSESPMSVVYFPYNAEEIKETVDTEVGN
GKLLLENLFPNQMYTVCLVPQIGKEQCVNFITLNSITDVGSNRWLLIVSGIACVFALPLI
VLLLYKISLLYCQRSGRNAEVDHDLSKETYVKFEALAMQQGMLNGQASELWTRRLTQESE
RMLLCSRSSIDSQMTYKSDNSRSEYLC
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgcggtgtgtcctggctgttcaggtgctgctgtcctgttggagcgtcgtgcggccgttt
tgcccctcgcagtgcacctgtgtgttccatggcaccaggacggtgctgtgtaacgacccc
gacacggccgagatccccgtcaacgtcccgctggacacagtgaagctgcgtgtggagaaa
acagcggtgcggcgagtaaaaaacgaggcgttctactacctcaccgagctcaggtatctg
tggctcacctacaactccatcagctcggtggaccctgagagcttttacaacctgaaggtc
ctgcacgagcttcgtctggatggaaatcaaatctccacgttcccctgggagtctctcaga
gagatgcccaatctcagggtgttggatctgcacaataatcgcttaacgagcattcctgta
gaagctgcagcgcacctggttaacatcacatacctggacctttccagcaataagttaaac
accttgccttctgatcttctggacatctggggacccgtttctggaatgaatcccagtggt
agtacctctgagaagattgtactggggatccaggacaacatgtggtactgcgactgccgc
atatccaaacttatcgaaatatccaaaatggcagaaggtcctgtggtgctaatagaccag
ttggtgacctgcagcggcccagagaacctggctgcggttctgtttaaacgagcagaactg
gatcagtgcattaaaccaacggtgatgacttcagctacgaagatcacatcttccctcagc
agtaatgtgctcctgcgctgtgatgctacaggttaccctaccccaaccctgctgtggagc
cgagaggacggttcagcgctcagtagcccagttgtgcaggaatccccaggtgaaggtgtt
cggtggtccatccttagtcttcagggaatcgcattgaaggacaccggtgtttatcgctgc
aaggcaaggaacgttgctggaagttcagaatccaccatcatgctatctttagctgaggtg
aacctcacaactccatctccttccttcaacatatcttcttctgctgttacagaagcaatt
aactctatcaccatcacttccaacaccaccaccaccaccacaaccacaaccaagccatct
ctgactacatcgccatctatagcgagcaagttgaacttaggtccaggtggaggcatccag
agatctccacctgataaaaatatatacaggatggagcagagcaaaatcagcatcaagaat
aaatctagaaagaaaggcatctcgtacatcagagatgttgaggtggttgaggaaacagga
gacagtgcagttgtgacatggatgagtgaggggtttcccagtgaatcacccatgtcagtg
gtgtactttccatacaatgcagaggagataaaggagaccgtggacactgaagttggaaat
ggtaagcttctactcgagaacctgtttccaaaccagatgtacacagtgtgcttggttccc
caaattggaaaggagcaatgtgtgaattttatcactctgaattccattacagatgttggt
tccaacaggtggctgttaatcgttagtggtatcgcttgtgtttttgcgcttcctctcatt
gttctccttctctacaaaatttcgctgctgtactgtcagaggagcggcaggaacgctgaa
gtggatcacgatctttccaaagagacttacgtgaaatttgaggctctcgccatgcagcag
gggatgctgaacggacaggcgagtgaactctggactcgacggctgacgcaggaatcggag
aggatgctcctttgttcacgttcaagtatagactcacaaatgacctacaaaagtgataat
tcacgatctgagtacctttgctag
DBGET
integrated database retrieval system
