Clarias gariepinus (North African catfish): 128532094
Help
Entry
128532094 CDS
T10780
Name
(RefSeq) uncharacterized protein zgc:136858 isoform X1
KO
K16330
pseudouridylate synthase / pseudouridine kinase [EC:
4.2.1.70
2.7.1.83
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00240
Pyrimidine metabolism
cgar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
128532094
Enzymes [BR:
cgar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.83 pseudouridine kinase
128532094
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
128532094
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Indigoidine_A
PfkB
Ysc84
Motif
Other DBs
NCBI-GeneID:
128532094
NCBI-ProteinID:
XP_053362294
LinkDB
All DBs
Position
10
Genome browser
AA seq
703 aa
AA seq
DB search
MIADCFGVKMLGKLSSTLHRYMSATSYRSDVLFKIHPTVCEALAEHRPVVALESTIITHG
MPYPQNLSTAKEVEDIVRAEGVTPATVAVLEGKVHVGLSSDELDFLARSKTTFKVSRRDL
PYVLSKGLFGGTTVSGTMIAAHKAGIPVFVTGGIGGVHRDGENSLDISADLTELGRTPIA
VVSAGVKSILDIGRTLEFLETQGVCVATYGESKIFPAFFSQKSECTSPYNVLNAEEAAEL
IASTLSLGLQSGVLLAVPIPDEHAAAGQQIEEAIQAAVTEARLKGIRGKDVTPFILHRVN
ELTAGQSLKANIALIHNNARVGSQIARTLAERVHHPRGGCRNHVNRNQASKPQTIVVGGI
NVDFIAKGKSKKLLLGQTNPGSVCQSFGGVGRNIADCLSRLGQTVLFISAVGADSHSDAV
LNHCRHMDTRAVVRMQGQRTATYCAVISESGELSLGLGDMDIHQEINKQYVSQYEDQLTS
ASLVVLDGNIPVSSIDYICSLAKKHSVPVWYEPTDADKACKPFVSESWKALSYTSPNLAE
LCTMNQTLCLPTPQVLPSSLEDVLECAATLSRPLLEHLHCVIVTLGALGVLVCGEHEAGT
VSLRPRKHKRKGRLCAVYYPALSIRSEETVNVSGAGDSLAGAMMAGILQGKDTDTCVRMG
LLAARLSLFSPHPITPSLTLDAILPDRVHPQPWPKPTCMWMES
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgattgctgactgctttggtgtaaaaatgctggggaagctgtcatccaccctgcatcgc
tacatgtcagcaacttcctacagatctgatgtgctgtttaaaattcaccccacggtgtgc
gaggctctagctgagcaccggccagtcgtagctctggagagcaccatcatcacacatgga
atgccgtaccctcaaaacctaagtacggccaaagaggttgaggacattgtcagagcggag
ggtgtgactccagccacggtggctgttctggagggaaaggtgcatgtcggcttgtcttcg
gatgagctggattttttggcccgcagtaaaacgaccttcaaggtgtccaggagggacttg
ccttatgttctcagcaagggtttgtttggaggaactactgtctcgggtacaatgatcgca
gctcacaaagcgggaattccagtttttgtgactggaggtatcggtggagtgcacagagat
ggagaaaacagcctggatatcagcgcagatctgaccgaactgggccgcactcccattgct
gtggtatctgctggagtaaagtccatcctggacattggacggaccctggagttcctggaa
actcaaggagtctgtgtagccacttacggagagtcaaagatttttccagctttcttttca
cagaaaagtgaatgcacatcaccttacaatgtcctcaatgccgaagaagcagctgagctt
attgcgagtacactctctctgggtcttcagagtggagtgctgcttgctgtgcctattcca
gatgaacatgctgctgctggacaacagatagaagaggccatacaagctgctgtcaccgaa
gccaggctaaagggaattagaggaaaagatgtgactccctttatcctacatagagtcaat
gagctcactgcagggcagtctctcaaagccaacatagctcttattcataataatgccagg
gtgggcagtcagatagcacgtacccttgctgagcgcgtgcatcatccacgaggaggctgt
agaaaccacgtaaataggaaccaggcatcaaaaccccaaactattgttgttggaggtata
aatgttgacttcattgctaaagggaaaagcaagaaattattgcttggacagacaaaccca
ggaagtgtctgtcagtcctttggtggagtgggtaggaatattgccgactgtttgagtaga
ctgggtcaaacagttttgttcatctcagccgttggagcagattctcatagtgatgctgta
ctcaaccactgtaggcatatggacactcgggctgttgtgaggatgcagggtcagcgaacg
gccacgtactgtgctgtcatctcggagagtggagagctgagtctaggacttggggacatg
gacatccaccaggaaatcaacaagcagtatgtttcgcagtatgaggaccagctgacgtca
gcgtctctcgtggttcttgatggcaacattcctgtttctagtattgactacatatgcagc
cttgccaagaaacattcagttccagtatggtatgagcccacggatgctgataaggcctgt
aagccctttgtttccgagagctggaaggcactctcttacacgtctcccaatctggcagag
ctgtgcaccatgaaccagactctctgtctacctactccacaagttttaccaagctctctg
gaagacgtgttggagtgtgcagctactctgtctcgccctctgctggagcacctgcattgt
gtgatcgtgaccctgggtgcactgggagtgttggtctgtggagagcatgaggctggaaca
gtcagcctgcgtccccgaaagcacaaacggaaaggaagactgtgtgctgtgtactaccca
gcgttgtcaatacgttctgaggaaacagttaacgtctctggagcaggagacagtcttgca
ggtgcgatgatggcagggatcctgcaggggaaagacacagacacctgtgtgcgaatgggc
ctcctcgctgcacgtctttctttattctcccctcaccccattaccccatctctgacccta
gatgccatcctcccagacagggtgcacccgcaaccctggcccaaaccaacctgcatgtgg
atggagtcataa
DBGET
integrated database retrieval system
