Clarias gariepinus (North African catfish): 128532122
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Entry
128532122 CDS
T10780
Symbol
lingo2
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128532122 (lingo2)
Membrane trafficking [BR:
cgar04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
128532122 (lingo2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
Ig_3
I-set
LRR_5
ig
LRR_14
Ig_2
LRR_9
LRR_EndoS
V-set
LRR_Zer-1
Ig_PDGFR_d4
LRRNT
Ig_6
Sp38
Motif
Other DBs
NCBI-GeneID:
128532122
NCBI-ProteinID:
XP_053362321
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Position
10:complement(2070193..2360306)
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AA seq
615 aa
AA seq
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MVDCLSRVMLHTAISCWQPLLGLVLVAVFLGSALACPSRCECSAQSRSVICHRKRYPAIP
DGIPIETRVLDLSKNRIQAINPDDFSVYPHIEELDLSGNIIAYVEPGAFNLLSSLHTLSL
KSNRIKLLSLGVFTGLSNLTTLDISDNKIVILVDYMFQDLHNLKSLDVGDNELVYISHRA
FNGLVSLESLTLERCNLTMVPTDALSHLHNLVSLHMRYLSISSLQPYSFKKLFRLRHLEI
DNWPSLDVFPANTLHGLNLTTLSVTNTNLSTFPYQALRHMPYLTHLNLSHSHIRTVEGGL
LQDLERLRELRLSGAQLMSVEPYAFQGLRWLRLLDVSHNRLDTLEKGVFHAPESLEVLFI
HDNPLVCDCRLMWLLQKRHSISFGEEQPECNTPEGIRGRPFKEFKETLLSYYVTCTKPKI
RENRTQLVSVEEGQPAQLQCSAEGTPRPTISWVTPRRRHLTNRSHGRVMVHNNGSLYIKA
VELQDGGVYVCVASNTAGNDTLMVSLAVKSLGSLYANRTQYYIDPNSTTANSTNPPATTF
GLDLKTILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNNIDIEYVPRSKSNGGSPEE
AEQTSGPRRFNMKMI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggtggactgcctgagtcgagtcatgttgcacacagctatatcttgctggcagccactg
ctaggactggtcctggtggctgtcttcttaggctctgcccttgcttgcccttcccgctgt
gagtgctctgcccagagtcgctctgtcatctgccatcggaaacgttacccggccatacca
gatggcattcccattgaaacgcgtgtcctggatctcagcaagaaccgcatccaggccatc
aatccagatgacttctctgtctacccacacattgaagaactggacctcagtggtaatatc
attgcctatgtagagccaggtgcttttaacttactttctagtttacacacccttagttta
aagagcaaccgcatcaagctcctgtcactgggcgtattcactgggctttcaaacctcacc
acgcttgacattagtgacaataagatcgtcatcctggttgattacatgttccaggatttg
cataatcttaagtcattagacgtaggggacaacgagctggtatatatctcacacagagca
ttcaatggcctggtttcactggagagtctaacactggagcgctgtaacctgaccatggtg
ccaacagatgccctgtcccaccttcacaacctggtcagcttgcatatgcgctacctcagc
atcagcagccttcaaccctattccttcaagaaactattccgtctgcgccacctggagatt
gacaactggccgtccctggatgttttcccagccaacactttgcatggcctcaacctcacc
accctttctgtcaccaacaccaatctttcaacattcccctaccaagccctgcgccacatg
ccttacctcacccacctgaacctatcccacagccacatccgcactgtggagggaggtctt
ctgcaagacttggagcgactccgtgagctgagattgtcaggagcccagctgatgtctgtg
gagccctatgcttttcagggtctacgttggctcagacttcttgacgtgtcccataacagg
ctggacactttggagaaaggtgtttttcatgctccagagtccctggaagtgttgttcatc
catgacaatcctcttgtgtgtgactgtcgtcttatgtggctgctgcagaagcggcactca
atctcatttggagaagagcaacctgaatgcaatactcctgaaggaattcgtgggcgccca
ttcaaggagttcaaggaaaccctgttgtcttactacgtgacctgcaccaagccgaagatc
cgagagaaccggacacagctggtgtcggtagaggaaggacagcctgcccagctacaatgc
agtgccgaagggactcctcggcccaccatttcctgggtcacaccgcgccggagacaccta
accaacaggagtcatggaagagtaatggtgcacaacaatggttcactctatatcaaggca
gtggagctccaagatggtggcgtgtatgtatgtgtggcctccaacacagccggaaatgac
acgctcatggtgtcattggccgtcaagagtcttggctcgctctatgctaacaggacccag
tactacatagatcctaacagtactactgctaacagtaccaatcctcctgccacaaccttt
ggcctggacctaaagaccatcctggtttctacagccatgggttgtttcacattccttgga
gtcgtcctgttctgttttctgctcctgtttgtatggagtcggggcaaaggaaagcacaaa
aacaacattgatatagagtacgtgccacgctccaagtccaatgggggctcacctgaggag
gcggaacagacctctggccctcgacgctttaacatgaaaatgatttaa
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