Clarias gariepinus (North African catfish): 128532194
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Entry
128532194 CDS
T10780
Symbol
chmp1a
Name
(RefSeq) charged multivesicular body protein 1a
KO
K12197
charged multivesicular body protein 1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03272
Virion - Hepatitis viruses
cgar04144
Endocytosis
cgar04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
128532194 (chmp1a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128532194 (chmp1a)
09143 Cell growth and death
04217 Necroptosis
128532194 (chmp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128532194 (chmp1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128532194 (chmp1a)
Membrane trafficking [BR:
cgar04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
128532194 (chmp1a)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128532194 (chmp1a)
Exosomal proteins of other body fluids (saliva and urine)
128532194 (chmp1a)
Exosomal proteins of colorectal cancer cells
128532194 (chmp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
Ist1
DUF5871
Motif
Other DBs
NCBI-GeneID:
128532194
NCBI-ProteinID:
XP_053362402
LinkDB
All DBs
Position
10:complement(33074437..33081006)
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AA seq
198 aa
AA seq
DB search
MDETLFQLKFTSKQLERLAKKAEKDSKAEQAKVKKALQQKNVDCARVYAENAIRKKNEGV
NWLRMASRVDAVASKVQTAVTMKGVTKNMTQVTKALDKALNSMDLQKVSAVMDKFETQVQ
NLDVHTSVMEDSMSSATTLTTPQQQVDDLIVQIAEESGLEVMDQLNELPAGASAIGESST
RTQDKEDQLSRRLAALRN
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggacgagacactgtttcaattaaagttcacatcgaagcagctggagagactggcgaag
aaagctgagaaggactcgaaagccgagcaggcgaaggttaaaaaggctctccagcagaag
aatgtggactgtgcacgtgtgtacgctgagaatgccatccgtaagaagaacgagggagtg
aactggctgcgtatggcgtcacgtgttgatgccgtggcctctaaagtccaaaccgctgtc
accatgaaaggggtgactaagaacatgacccaggtgaccaaggctctggataaagctctg
aactccatggatctgcagaaggtgtcggccgtcatggacaagtttgagactcaggtccag
aatctggacgtacacacttcagtgatggaggactcaatgagctcagccaccaccctgaca
acgccgcagcagcaggtggacgatctgatcgtacagattgcggaggaaagcgggctggag
gtgatggaccagctcaacgagcttcctgcaggagcctccgccattggggagagttcaacc
aggacacaggacaaggaggaccagctgtcccgcaggctggcggctctaaggaactga
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