Clarias gariepinus (North African catfish): 128532209
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Entry
128532209 CDS
T10780
Symbol
nocta
Name
(RefSeq) nocturnin isoform X1
KO
K18764
nocturnin [EC:
3.1.3.108
]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgar03019
]
128532209 (nocta)
Enzymes [BR:
cgar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.108 nocturnin
128532209 (nocta)
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
128532209 (nocta)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
128532209
NCBI-ProteinID:
XP_053362415
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All DBs
Position
10:5325546..5332894
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AA seq
429 aa
AA seq
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MFAVRRCSALIPRDLRDLAALCFSSPGPTPTKPPAELKHARSSPSLRAPSRSQSPPARVH
VCQMGGSSSSSSVRLFSSLAQSLSSVPLPHTHAETEESELEQTDPETLLRECEEVLRKRP
PRPHRDFIRTRASAAHNPQIRVMQWNILAQALGEGKDGFVRCPMEALNWAERKYLILEEI
LTYRPDIVCLQEVDHYYDTFQPIMSSLGYQSSFCPKPRSPCLDVRGNNGPDGCALFFSRE
RFRSLQLHHLRLSAMALKTNQVAVVAALQCQVTGRVFCVGVTHLKARSGWETFRGAQGAN
LLQQLEGILDQEDAVPLLVCGDFNAEPGEEVYRRFLDSPLGLDSAYRTLSADGVTEPSYT
TWKIRPSGECRTTLDYVWYSRHGFNVDAALGMPSEDQIGPDRLPSYHYPSDHLSLVCDFS
FIQEPHRLM
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcagtaaggcgctgctccgcgctcataccgagggacctgagggacctggccgcg
ctctgcttctcctcacccggacccactccgacaaaacctcccgctgaactgaagcacgcg
cgctcctcgccttcactgcgcgcgcccagccggtcccagtctcctccagcacgagtacac
gtgtgtcagatgggcggcagcagtagcagtagcagcgtgcggctcttcagttctctggct
cagtctctgagcagcgtgccgctgccgcacacacacgccgagaccgaggagagcgagctc
gagcagacggatcccgagacgctcctgcgcgaatgcgaggaagtcctgaggaagcgcccg
ccccggccgcatcgagacttcatcagaaccagagccagcgccgcgcacaacccgcagatc
cgcgtcatgcaatggaacattctagcgcaagctcttggcgagggcaaggacggctttgtg
cgctgcccgatggaggcgttgaactgggcagagaggaagtacctgatcctggaggagatc
ctgacctacagacccgacattgtgtgcctgcaggaggtcgatcactactatgacaccttc
cagcccatcatgtccagcctgggctaccagagcagcttctgccccaagccgcgctccccg
tgcctggacgtgcgcggcaacaacggccccgacggctgcgccctgttcttcagccgcgag
cgcttccgctcgcttcaactccatcacctccgcctctcagccatggcgctcaagaccaat
caggtggccgtggtcgccgctctgcagtgccaggtcacggggcgggtcttctgcgtcggc
gttacgcacctgaaggccaggagcggatgggagaccttccgcggagcccagggcgccaat
ctgctccagcaactcgagggcatcttggatcaggaggacgccgttcctctgttggtgtgc
ggagattttaacgccgagccgggcgaggaggtgtaccgccgcttcctggactctccgctc
ggcctcgatagcgcgtacaggacgctaagcgcagacggcgtcacagagccgtcctacacc
acctggaagattcgtcctagcggagagtgccgcacgacgctcgactacgtgtggtactcg
cggcacggcttcaatgtcgatgccgctctcggcatgccgagcgaggaccagatcggccct
gaccgccttccctcttaccactatccgtccgatcacctttcgctcgtctgtgacttcagc
ttcatccaggagccccacaggctcatgtga
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