Clarias gariepinus (North African catfish): 128532224
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Entry
128532224 CDS
T10780
Symbol
lman2
Name
(RefSeq) vesicular integral-membrane protein VIP36 isoform X1
KO
K10082
lectin, mannose-binding 2
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128532224 (lman2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128532224 (lman2)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
cgar04091
]
128532224 (lman2)
Membrane trafficking [BR:
cgar04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
128532224 (lman2)
Lectins [BR:
cgar04091
]
L-type lectins
128532224 (lman2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lectin_leg-like
Lectin_L-type_dom
Lectin_legB
UL42
Motif
Other DBs
NCBI-GeneID:
128532224
NCBI-ProteinID:
XP_053362430
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Position
10:23987822..23998968
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AA seq
348 aa
AA seq
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MATDRQLSSFFSYPHKGVCKMFLLLWLLHFCSVSSDITDGTSEHLKREHSLIKPYQGVGT
SSSSQWDFWGSTLVTSQYVRLTPDERSRQGSIWNTVPCYLKDWEMHVQFKVHGSGKKNLH
GDGIAIWYTKERLHPGAVFGNQDRFVGLAVFVDTFRNDLNGMDRSFPYISAMVSNGSLSY
DHGNDGRSTELGGCSAELRNKNHDTYLAIRYSKGRLTIMVDVDDKNGWKECIDIGGVRLP
TGYFFGASAATGDLSDNHDIISMKMYQLMVEHTPEEDSQDWTKIEPSVSLLKSPKDNVDD
PTGNFRSTPLTGWKVFLLLLCALLGIVVCAVVGAVVFQKRQERNRRFY
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggctacagataggcaactgtcatctttttttagctaccctcacaaaggcgtttgtaaa
atgtttctacttttgtggttgctacatttttgttcggtgtcttcggatataactgatggc
acctcggagcacttaaagcgtgaacactcactcataaagccatatcaaggagttggaaca
agttcttcgagtcagtgggatttttgggggagtactttagttacaagccagtatgtgcgc
ctgacacctgacgaacgtagcaggcaaggttccatctggaacacagtgccctgttatttg
aaagactgggagatgcatgtgcagtttaaagttcatggatcagggaagaagaacctgcat
ggggatggcattgctatctggtacacaaaagagcgattacatcctggagcggtctttgga
aaccaggaccgttttgtaggcctagctgtttttgtggatactttccgcaatgacctcaac
ggcatggatcgctcctttccctacatttctgcaatggtgagtaacggctcgctgtcatac
gatcatggaaacgatggccgctctacagaactgggcggctgctcggctgaactcagaaac
aaaaaccacgacacttatcttgctattcgatactccaaaggcagactcacaattatggta
gatgtggatgataagaacggttggaaagagtgtattgatatcggaggcgtccgactgcct
actggctacttttttggagcgtctgcagccacaggcgatctctcagacaaccatgatatt
atctccatgaaaatgtatcagttgatggtggaacacacgccggaggaagatagtcaagac
tggactaagattgagcccagtgtcagtctgctcaagtctcctaaagacaatgttgatgat
ccaactggcaatttccggagtacacctcttactgggtggaaggtcttcctacttctcttg
tgcgctcttctcgggattgttgtttgcgctgttgtgggagcagtggtctttcagaaacga
caagaaaggaacaggaggttttactag
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