Clarias gariepinus (North African catfish): 128532249
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Entry
128532249 CDS
T10780
Symbol
tbc1d10c
Name
(RefSeq) trichohyalin
KO
K19944
TBC1 domain family member 10
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128532249 (tbc1d10c)
Membrane trafficking [BR:
cgar04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
128532249 (tbc1d10c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
128532249
NCBI-ProteinID:
XP_053362464
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All DBs
Position
10:complement(7166645..7176260)
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AA seq
1288 aa
AA seq
DB search
MSVCSDQREDGESTSGSSEAKTDRYGFLLVNGDTNNDSDDPSPELVRHREMKWITLMNQW
DQVLEKKHSKIKAQCQKGIPASVRSRCWPLLCGAKQRKDNNKDLYQTLETSPGQQSWIDV
IKRDTDRQFPFHEMFQSKDSPGQQGLLQVLKAYTQFRPDEGYCQAQGPVAAVLLMNMPME
EAFWCLVQISELYLPGYYSPLLEGVLFDAAVLFSVLKRTCPAAYKHMQRQGVEPLMFATD
WLMCLYSRHLPFNTLLRVWDLFFCNGVRVLFQVAVVLVRRCLGDARHRKECEGQMETLER
LRSVKGHVQHDQADAFIQEVCSVPLSVAELQRQTEKELQKWRKERPGSTFDPRDRCHGYH
MIWEKGKEREKENEKKGKQGGTLSVSLMRSQSSLSPAILRKKWRKRGSKAETEEWEGRGF
SKQDSDDEEKRRASVCGVAGELRSKTHRTSQDLGTELRKDDNTSTNTRRISGTETQPCPE
SSELNETVFEEDENDVAVTPIPSHTDNGECEEETRPPSSLKEDDLQTGRSLQDDEEKKVQ
THEDDQSEEIPTHQDQPEAETQQEESQPSEIQDEDNARTKPEEETQEDESNQEEGIENKT
FKPEEEAQRNLKVQTEEVNITQQEVEVEVNTDTQKKEIHICLCEQEQENEMNSKDGEEIQ
IDSSKQEEETGENSQKQQEEIHLGSAEVEAVDNNIKQEKEIQTNSSEQEVEIQEERETKA
NSSEEEVDLQEGNEIKAKICEEEVEKEDENEVKENISEQEVETQEENEMKENISEQEVET
HEENEMKENISEQEVETHEENEMKENISEQEVETQEENEMKENISEQEVETQEENEMKEN
ISEQEVETHEENEIKEGISEVNIKEVEIKEGTEIKANSGEQEVEIQNEEKLANIDSEEEK
LKSCHIDVDEQQEQEMHSDVQTPEDQQDVEKDVPCVQGEDNAKGEICNRINTDMDMTQEE
QESERERSEENEQEAGISNSPGEETEGSVLDEEKRNSNHVLGDEEESETVVSSPCSQPEI
EMGHGTESEPAQDSNKQENMEGNKTSTPEHGEPDRTSGNPEAPQPDNKEEEVEIEKQITT
ESNPVATHAPSGSNPNPQLRLRRSSSSHTTYPTILSEDTFKEPQQSIKHEPQTTKAEEHQ
TTTQPTQTQSSTPEEPETQALPTTQSKSDKPKRRGLFHRLRAEAPSKSTIPKIVIQDFSE
GEEKLSSKERRRRRRMQERKEKEEEKERKKLEKELEKEKERVRKKPQTRGRSFQVLNKKH
DDGDDAFSGKSDSQTIGRKRNSYSESYF
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtctgttcggaccagagagaagacggagagagcacctccggctcctctgaggct
aaaacagaccgttacggattcctcctcgttaacggagacacgaataacgacagtgatgac
ccctctcccgagttggtgagacatcgagaaatgaaatggatcaccctaatgaaccagtgg
gatcaggtgctagagaagaagcacagtaagatcaaagcacagtgtcagaagggcatccca
gcgtctgtcaggtcccggtgctggcctttgctgtgtggagcgaaacagaggaaagataat
aacaaagatctctaccaaactttggagacgtccccgggtcagcaaagctggatcgatgtc
atcaagagagacacggacaggcagtttcccttccacgaaatgtttcaatccaaagacagt
cccggtcagcagggcttgttgcaggttctgaaggcgtacacacagtttcggcccgacgag
gggtactgccaggcgcagggtcccgtggcagcagtgctcctgatgaacatgcccatggag
gaagcattttggtgtctggtacaaatcagcgaactctacctccctggttactacagcccc
ctgctggaaggagttttgttcgatgctgcagttctttttagcgtgttaaaaagaacgtgt
ccggctgcatacaaacacatgcagagacaaggggtggagcctcttatgtttgccaccgac
tggctgatgtgcctatatagccggcaccttcccttcaacactttactccgtgtctgggat
ctcttcttctgcaatggtgtacgagtgctgtttcaggtggccgtggttttagtgcgacgc
tgcttgggggatgctcgacatcggaaagagtgtgagggccagatggagacactggagagg
ctgcggtcagttaaagggcatgtccaacatgatcaagctgacgcttttattcaagaggta
tgttcggttcccctgtcggtggcggagctccagcggcagactgaaaaggagttacagaaa
tggagaaaagagcgccctggctcgaccttcgaccctcgagatcgttgccacggataccat
atgatttgggagaaagggaaggaaagagagaaggagaacgaaaagaagggaaaacagggt
ggaaccctgagtgtttccctgatgcgttcgcaatcgtctctctctccggcaatccttcgt
aaaaaatggaggaagagagggagtaaagcagagactgaggagtgggagggtagagggttc
tcaaagcaagacagtgacgacgaagagaaaaggagggcgagcgtgtgcggtgtagccggg
gagctacggtccaagacacacaggacatcgcaggatttagggacagagttaaggaaagac
gataacacgagcacaaacacccggcggatatcgggtacggaaacgcagccgtgtccggaa
tcatcggaactcaacgaaaccgtgtttgaggaggatgagaacgatgttgctgtcaccccc
atcccatcacacacggacaatggtgaatgtgaagaggaaacgagaccgccttccagcctg
aaagaagatgatttacaaacaggtcgcagtttacaggatgatgaggaaaagaaagttcag
actcacgaagatgaccagagtgaagaaattccaacacatcaagaccagccagaggctgaa
acacaacaagaggagtcacaaccatcagaaatacaggacgaggacaatgcaagaaccaaa
cctgaagaggaaacacaagaagacgaaagcaatcaggaggagggcattgaaaataagaca
tttaaacctgaagaggaggcacaacgcaacctcaaagtacaaacagaggaagtgaatatc
actcaacaggaagtggaagtcgaggtaaatactgacacgcagaaaaaggaaatacatatc
tgtttatgtgaacaggagcaggaaaatgaaatgaatagtaaagatggagaggaaatacag
atagatagtagtaaacaagaagaggaaacaggggagaatagtcaaaaacaacaagaagaa
atccatctgggtagtgctgaagtggaagcagtagataacaacattaaacaggaaaaggaa
atacaaacaaacagcagtgagcaagaagtggagatacaggaagaaagggaaacaaaggca
aacagcagtgaagaggaagtggatctacaggaaggaaatgagattaaggcaaagatatgt
gaagaggaagtggaaaaagaagatgaaaatgaagtgaaggaaaatataagtgaacaggaa
gtggaaacacaagaggaaaatgaaatgaaggaaaatataagtgaacaggaagtggaaaca
cacgaagaaaatgaaatgaaggaaaatataagtgaacaggaagtggaaacacacgaagaa
aatgaaatgaaggaaaatataagtgaacaggaagtggaaacacaagaggaaaatgaaatg
aaggaaaatataagtgaacaggaagtggaaacacaagaagaaaatgaaatgaaggaaaat
ataagtgaacaggaagtggaaacacacgaagaaaatgaaataaaggaaggtataagtgaa
gtaaatataaaggaagtggaaataaaagaaggaacggaaataaaggcaaacagcggtgaa
caggaagtggaaatccagaatgaagaaaaactagcaaatattgatagtgaagaagaaaag
cttaaatcatgtcatatagatgtagatgagcaacaggaacaggaaatgcattcagatgta
caaacgccggaagatcagcaggatgtagagaaagacgtaccctgtgttcaaggggaagat
aacgcgaaaggtgaaatctgcaacagaatcaatacagatatggacatgacacaggaagag
caagaaagcgagagagagcgttcagaagagaatgaacaggaggcaggaattagtaattca
ccaggtgaggaaacagagggaagtgtcctggatgaagaaaagagaaacagcaatcatgtc
ttaggcgatgaagaagaatcagaaacagtagtatcttcaccttgcagtcaacctgagata
gagatgggacatggaacagaatctgagccagcacaggactccaataagcaagaaaacatg
gaagggaacaaaacatccacacctgagcatggagaaccagatagaaccagtggcaatcca
gaggctccacaaccagacaacaaggaggaggaagtggaaatcgagaaacaaattacaaca
gagtcaaatccggtagcaacacatgctccctctggatcaaatccaaaccctcaactccgc
cttcgcaggtcctccagctcccacaccacatatcccacaatcctctctgaggacacattc
aaggaaccgcaacaaagcattaaacatgagcctcaaaccacaaaagcagaagagcatcaa
accaccacacagccaacacaaacacaaagctccacaccggaggaaccagaaacgcaagct
ctcccgacgacgcaatccaagtcggacaaacccaaacgcaggggtctgtttcaccgtctc
cgggctgaggcgccttccaaatccaccatccccaaaatcgtcatccaggacttcagtgaa
ggggaggagaagctgagctctaaagagaggaggcggcggaggaggatgcaggagaggaaa
gaaaaggaagaagagaaggagaggaagaagcttgagaaagagctggagaaggaaaaggaa
agggtgaggaagaagcctcagacgagagggaggagttttcaggtgctcaataaaaagcat
gacgatggcgatgatgccttctctggaaaaagtgactctcagacgataggacgtaaaagg
aactcttactctgagagctatttctga
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