Clarias gariepinus (North African catfish): 128532323
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Entry
128532323 CDS
T10780
Symbol
sox3
Name
(RefSeq) transcription factor Sox-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128532323 (sox3)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128532323 (sox3)
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Ortholog
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
128532323
NCBI-ProteinID:
XP_053362552
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All DBs
Position
10:18520102..18522191
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AA seq
303 aa
AA seq
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MYSMMETELKSPLPQSNAGSGPGGKSGGGSDQDRVKRPMNAFMVWSRGQRRKMAQENPKM
HNSEISKRLGADWKLLTDAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYS
LPGGLLAPGAGAVNSAVSMGHQRMDGYAHVANGWTNGAYSLVQEQLAYPQHHGMSSPPPL
QQMHRYDMTAGLQYPMMSTAQTYMSAASTYSGVSYAQQSPGAVGLGSVASVCKTEPSSPP
PAIASHSQRACLGDLRDMISMYLPPGGDSADHNTLQSSRLHSVHPHYQSAGTGVNGTLPL
THI
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatggaaaccgagctgaaaagtcccctgccgcagtccaacgcgggttcg
gggccgggcgggaagagcggtggcgggagcgaccaggaccgggtgaagcggccgatgaac
gcgttcatggtgtggtcgcgcggccagcgcaggaagatggctcaggagaaccccaagatg
cacaactccgagattagcaagcgcctgggtgcagactggaagctgctcaccgacgctgaa
aagcggccgtttatcgacgaggcaaagcgcctccgtgccatgcacatgaaggagcacccg
gattacaaataccggccgcggcgcaagaccaagaccctgctgaagaaagacaagtactca
ctacccggcgggctcctggctcctggcgcgggcgcagtaaacagcgctgtgtccatgggg
caccagcgcatggacggctacgcacacgtggccaacggttggacgaacggcgcgtactcg
ctggttcaggaacagctggcctacccgcagcaccacggtatgagtagcccaccacctcta
caacaaatgcaccgctacgacatgacggcgggtctacagtacccgatgatgtccacagcg
cagacgtacatgagcgcggcgtccacttacagcggcgtctcgtacgcgcaacagagcccg
ggcgccgtgggcctcggctcagtggcctcagtgtgcaagacagagccgagctcaccacca
cctgccatcgcctcccactcacagcgcgcttgcctcggagacctgagggacatgatcagc
atgtacctgccacccggaggagacagcgccgatcacaacacactgcagagcagccgctta
cacagcgtccatccacactaccagagcgcgggcaccggggtgaacggaacgctaccccta
acccacatttaa
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