Clarias gariepinus (North African catfish): 128532655
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Entry
128532655 CDS
T10780
Symbol
cltcb
Name
(RefSeq) clathrin, heavy chain b (Hc) isoform X1
KO
K04646
clathrin heavy chain
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04142
Lysosome
cgar04144
Endocytosis
cgar05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128532655 (cltcb)
04142 Lysosome
128532655 (cltcb)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
128532655 (cltcb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128532655 (cltcb)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128532655 (cltcb)
Membrane trafficking [BR:
cgar04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
128532655 (cltcb)
Exosome [BR:
cgar04147
]
Exosomal proteins
Proteins found in most exosomes
128532655 (cltcb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
128532655
NCBI-ProteinID:
XP_053362701
LinkDB
All DBs
Position
11:21432181..21453219
Genome browser
AA seq
1677 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGVNPANIGFSTLTMESDKFICVREKVGEQAQVVIIDLSDPNS
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAGFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPSGN
QPFPKKAVDVFFPPEAQNDFPVAMQISSKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNNLFAGGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQDE
EPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPTEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLTTQSLTELFESFKSFEGLFYFLGSIVN
FSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDAERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRKDPELWASVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRSRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYMEV
GHAAAQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPADAWKESQFKDIVTKVANVELYYKAIQFYLEFKPLLLNDLLIVLSPRLDHTRAVNFFQ
KVKQLSLVKPYLRSVQNHNNKSVNEALNNLFIIEEDYQALRTSIDAYDNFDNISLAQSLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLQWFLQE
EKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDKLDASESLR
KEEEQATEAQPIVYGTPQLMLTAGPSVAVPPQQPYGYGYGAPAGYAQPAQPGFGYGM
NT seq
5034 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcttgcctattcgctttcaggagcacctgcagctccagaacctgggcgtt
aacccggcaaacatcgggttcagcactctgactatggagtcagacaagttcatctgcgtg
agggaaaaggtcggagagcaagcacaggtggtcatcatcgacctgagcgatcccaattcg
cccatccgcaggcccatctccgcagatagtgcaatcatgaatccagccagcaaagtgatt
gctcttaaagctgcgaaaaccctccagattttcaacattgagatgaagagcaagatgaaa
gcgcacaccatgactgacgatgtgacattctggaagtggatctccctcaacaccgtagca
ctagtaacagacaatgcagtctaccactggagcatggaaggcgattcccagcctgttaaa
gtgttcgaccggcattccagcttagcaggctgccaaattataaactaccgcactgacgcc
aaacagaaatggctccttcttattgggatttccgcacagcaaaaccgtgtggtcggagcc
atgcagctgtactctgtggacagaaaggtgtcacagcctattgaaggccatgctgcaggc
tttgctcagttcaaaatggagggaaatgctgaagaatccacactgttttgctttgctgtt
cgtggtcaagctggaggaaagctccacattatcgaagtcggaactcctccatctggaaat
cagcctttcccgaagaaagccgtagatgtgttctttccaccagaagcccaaaacgacttc
cctgttgctatgcagatcagctccaaacatgatgtagtctttctcatcaccaaatatggc
tacatccacctgtatgaccttgaaactggcacttgcatctacatgaacaggatcagcggg
gagaccatttttgtcaccgctcctcatgaggctacttctggcatcattggtgttaacagg
aagggacaggttctgtcagtgtgcgtagaggaagagaacatcatcccctacatcaccaat
gtcctgcagaaccctgatctggcactgcgcatggccgtacgcaacaacttggctggcgca
gaggagctctttgcacgcaagttcaacaatttgtttgcagggggcaactactccgaggca
gccaaggttgccgccaatgcaccaaagggtattttgcgcaccccagacaccattcggcgt
ttccagagtgttcctgcccaaccaggccaaacctctcctctgcttcagtactttggcatc
ctgctggatcagggccagctgaacaagtttgagtccctggagctgtgtaggcctgtactg
cagcagggccgcaagcagctgctggagaaatggctgaaggaagataagctggagtgctct
gaagagctgggtgatttggtgaaatctgtggacccaactctcgctctcagtgtgtatctg
agagcaaatgtccctaataaagtcattcagtgttttgctgagactggccagttccagaaa
attgtactgtatgcaaagaaggtcggttacactccagactggatctttctgcttcgaaac
gtgatgcgcatcagtccagagcaaggcctgcagttctcccagatgcttgtgcaggacgag
gaaccactggctgacattacccagattgtggatgtgttcatggagtacaacctgattcag
cagtgcacttccttcctgctggatgctctaaagaacaaccgacccactgaaggtccactg
cagacgcggctgctggaaatgaacttgatgcatgcgccacaggttgctgatgctattttg
ggaaatcagatgttcactcactatgaccgagctcatgttgcccagctatgtgagaaagcc
ggactgcttcaaagagcccttgaacactacactgacctgtatgacatcaaacgtgctgtg
gtacacacccacctgctcaaccctgagtggctagtgaacttttttggttcactgtcagtg
gaggactccctggagtgcctgagagccatgctctcggccaacatacgccaaaacctgcag
atctgcgtccaggttgcatccaaatatcatgagcagctcaccacccagtccctcaccgag
ctctttgaatcttttaagagctttgaaggtctgttctatttccttggctctattgtgaac
ttcagtcaggacccagaagtccattttaagtacattcaggcagcctgtaaaactggacag
attaaagaggtggagagaatctgcagagaaagtaactgctatgatgctgagcgtgtgaag
aattttcttaaggaagctaaactgactgatcagctgcctcttatcatcgtgtgcgaccgc
tttgactttgtccatgacctagtcctttatctgtatcgcaacaacttgcaaaagtatatt
gagatttacgtgcagaaggtcaatcccagccgcttgcctgtagtgattggtgggctgttg
gatgtggactgctcagaggacgtcattaagaacctgatcctggttgtccgaggacagttt
tccaccgatgagttggtggctgaggtggaaaagcggaatagactgaagctgctgctgccc
tggctggaggctcgtattcatgagggctgtgaagaaccagctacgcacaatgccctggct
aaaatctacattgacagcaacaacaaccctgaacgattcctcagagagaacccgtactac
gacagccgtgtggttggcaagtactgcgaaaagcgggatccccatctggcttgtgtggct
tacgagagaggacaatgtgaccaagagcttattaatgtatgcaatgaaaactcccttttc
aagagtctgtctcgatatttggtgcgtcgtaaagaccctgaactatgggccagtgttctc
ctggaaagcaatccctacagaaggccactgattgaccaggttgtgcagactgcactgtct
gagacccaggacccagaagaggtgtctgttacagtcaaagccttcatgactgctgatctg
cctaatgagctgattgagcttcttgagaagattgttttggataactctgttttcagcgag
cacaggaacctgcagaaccttctcattttgactgccatcaaagctgatcgctcacgcgta
atggagtacatcaaccgtttggacaactacgatgcccctgatattgccaacattgccatc
agcaacgagctctttgaagaggcttttgccatcttcaggaagtttgatgtcaacacatct
gcagtgcaggttttgattgagcacatcggcaacctagaccgggcctatgaatttgctgaa
cgctgcaatgaacccgcagtgtggagccagttggctaaagctcaactgcagaagggcctg
gtaaaggaagccatcgattcatacattaaggccgatgacccgtcagcatacatggaagta
ggacatgctgcagctcaaagtggaaactgggaggatttggtcaagttcttgcagatggcg
cgtaagaaggcccgtgaatcatatgtagagactgagctgatctttgcattggctaaaaca
aatcgcctggctgaactggaggagttcatcaatggcccaaataacgctcacatccagcaa
gttggtgatcgatgctatgatgagaagatgtatgaggcagctaagctactctacaacaat
gtgtccaactttggccgcctggcttccaccctggtccacctgggagaataccaagctgct
gtggatggagcacgcaaagccaacagcacacggacttggaaagaagtctgttttgcttgc
gtagatgggaaggaattccgtctggcacagatgtgtggcttgcatattgttgtccatgct
gatgaactggaggagctcattaactattaccaggaccgtggctattttgaggaactgata
accatgttggaggcggcactagggcttgagcgtgctcacatgggcatgttcactgaactg
gctatcctctattctaagttcaaaccacagaagatgagggagcacctcgagctcttttgg
tcaagagtcaatattcctaaggtcttgcgggcagcagaacaggctcacctgtgggctgag
ctggtcttcctttatgacaagtatgaagaatacgataacgccataatcaccatgatgaac
caccctgcagatgcttggaaggagagccagttcaaagacattgtgaccaaggtggctaat
gtggaattgtattacaaagccattcagttttatttggagttcaagcccctgttactgaat
gatttgctcatcgtcctgtccccaaggcttgatcacacacgcgctgttaacttcttccaa
aaggttaagcagctgtctctggttaaaccatacctgcgatctgtacaaaaccacaacaac
aaatcagtcaatgaagcactaaacaatctcttcataattgaggaagactaccaggctttg
cgtacatccattgatgcctatgacaacttcgataacatatcactggcccagagcttggag
aagcatgagctcattgagttcaggagaattgctgcctacctctttaaaggcaacaaccgc
tggaagcaaagtgtggaactctgcaagaaggataaactctacaaggatgccatgcagtat
gcatcagagtcgaaggacacagagctagctgaggagctgctgcagtggttcctgcaggag
gagaagaaggagtgctttgccgcttgcctcttcacatgctacgacctcctgcggcccgac
gtggtgctggaaacagcctggaggcacaacatcatggacttctccatgccctacttcatc
caggtcatgagggagtacctcagcaaggttgataagctggatgcatccgaatctttgagg
aaagaggaagagcaagccacagaggcacaacccattgtttatgggacaccccagctgatg
ctcactgcaggcccaagtgtcgccgttcctcctcaacagccttacggctatggctacggt
gcccccgctggctacgctcagccagcacagcccggcttcggctacggcatgtag
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integrated database retrieval system
