Clarias gariepinus (North African catfish): 128532676
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Entry
128532676 CDS
T10780
Symbol
frem2b
Name
(RefSeq) FRAS1-related extracellular matrix protein 2b
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04512
ECM-receptor interaction
Brite
Lectins [BR:
cgar04091
]
C-Type lectins
Lecticans
128532676 (frem2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128532676
NCBI-ProteinID:
XP_053362727
LinkDB
All DBs
Position
11:6531886..6649912
Genome browser
AA seq
3106 aa
AA seq
DB search
MAQSRSESAVWSFIMALSLLEVSYVRGFDSLGLSYGHRSELSEDAILVANNGIRVPFGRS
VFIDPINDLVLQVRPGDKCTITVLDNDPLSQKPGQLSPKKFPCEFGPSDVKYSHFGSRSP
AKDRVRLQLRYDTQTDTVIIPFMMEVEVIFTQLEILIKNMPLTVEKLLGTSNPIDNKILE
FTYDRNMYQCKVTSLAGTGVLPRYGKLIDDGKLGKMFNCDEFLRLNVRYRHTFDQRSPNR
DYIPMYVELQDKESNVIKQEFFQIMVRIKEGEENTPPKPSFVSMMMMEVDQFVMTAITPD
MLAAEDVESPSDDLIFNITSPLSFEEGYIVSTDDRNLPITSFYQGDLQDLKIAYKPPSED
SDSERIFQIEFVVVDTEGAVSDPFAFMIVVKPMNTLAPVVTRNTGQLLYEGQTRSLSSSQ
NLQISDEDNLHDVRVTVIDGLRHGELTVIGSGRKFFTVADLDHGSVVYQHDGSDTYSDNI
IFRMTDGKHEVEFLFPITVVPTDDEPPIINANTGLVMLKNQMMPISPLMLSAADIDSEDS
TIKFVLEEPFSIIGEVLLRQADAPEDPSTWRFNSEDEMYEKAVTEWLQQDITDGKLFYRH
VGPHNTKTVTDQFVFRVQDDNDPPNQSGQNSFIIKILPVDDIPPELYPDTTLQLTVHEYQ
LTFLRKKFLRYTDLDSEDRDLKYTVTQPPRDTDENNPVILGAIVLTESPNIEVTEFTQAQ
INHHKIAYKPPDLELGITPHVVQFHYTVEDTAGNGVDGAFTIFLQPVDNKPPQITNTGFT
VLERGIHVITRSELDTTDPDTDSTKISFTLTQPPLHGKIQYMFTDLTKGDSFKLDDISQG
RISYSHNGDESTNEFFQLDVSDGVHVVTITIKINVKLIDDETPTITLPEGTIGSYIDVLE
NGATEITANVIQGRDEDTDDLRLTFIVEDPPVLGEILVNGIPANRFTQADIISGFVVYAH
TSGEIGLTTKEDFFNLTLTDMSDEWTVGGNKIKGVRVHVTILPIDSQSPQVFVGHQFNVV
EGEKNVIQIAHISASDIDTPNDDLLCTIIVQPTSGYLENISPAPGSEKSRSGTAISAFTI
KDIKQNHIYYVQSIHKGVEPVEDRFTFRCSDGINFSEIHFFPIVIIPSNDEKPEIHMREF
VVMEGMNVVIDTPILNGVDADVPTDELTFIVTKPPKHGFIINQLTTGTIPVTNFTLDQIR
EASSIVYEHDDSETTEDSFKILLTDGKFTVEKTVIIMVIPVDDETPRMAINDGLEIEIGE
IKEITNKVLKATDLDTNDSTLTYVIRYGPNQGILQKRTPVGTLQNITVGMNFTQSDIDEN
LIIYVHNGQEGIRDLIKFDVTDGINPLIDRYFYVTIGGIDMVFPEVISKGVSLKEGGRVT
LNTDLLSTSDLNSPDEHLVFTITRAPVRGHLECTDSPGMPISSFTQLQLAGSKIYYIHTA
DDEVKMDSFEFEVTDGYNPVFRTFRISITDVDNKKPVVTIHGLVVNEGKSKLITPFELTV
EDRDTVDRHLKFTITQVPIHGKLLFNNTRTITSFTKQDLNENMISYKHDGTESAYDSFSF
FVTDGTHSDFYVFPDTVFETRKPQVMKITILSVDNGIPQIVVNKGGTALKTLPGGHLGLV
ITSKALKAEDRDSSHGAVTFRVTVGAAHGYLIDLGKGNATITTFTQADIDDMHICYVLRN
GDNATSDIFHFSIEDNGGNKLKNQQFRLTWAWISLEKEYYVVDEEAKFLEVVLRRRGYLG
ETSFISIGTRDGTAEKDKDFRGKAQKQVQFNPGQTTATWKVRILGDHLYEQAETFQIVLS
EPVMGALEFPQTATVEIIDPEDESTVFIPSSTYSIEEDVGEFLIPVRRSGDVSQELMVIC
FTQRGTATGTVPTTVLSYSDYISRPEEHISVLRFDRDEIEKACRVVVIDDSLYEPEESFN
VTLSMPMGGRLGQEFPTTRITILPDSDDAPVFYFGDTEYHVDESDGYVEVRVWRTGSDLS
KTGTVTVRSRKTDPVSAEAGVDYVGISKNLDFAPGVTIQTIRVTILDDLGQPVLEGPERF
ELVLRMPMNGILGEPSKATVFINDSVSDLPKVQFRDAKYTGNENDGKITAIIYRSGDLRF
KSSVRCYSRQGSAQVMMDFNERPNTDASVITFLPGEVEKPCVLILVDDTEHEEVEELRLV
LGSPKSESPFGGASIGVQNETLIKIKDDADKAIIRFGVTKFSVSEPSEAGQVSVVKVPVL
RVGDTSKVSVVRVHTKDGSATSGEDYHPVSEDVIFKQGETEHAVDVEILYDGVREMREAF
TVHLKPDENMVAEIQMTKAIIYIEEGNSMADVTFPSVPVVISLLHYDDAVGAPESRPPAG
YPVICVTACNPKYPDFERTGSICASERINNTLTRYRWLVSAPAGPDGVTSPMREVDFDTF
FTSSKRITLDSVYFQAGSRIQCAARAVNSNGDEGLELSSAIVSASVEEGLCQPRVIGAVG
AEPFSAKLRYTGPEDPHHPNLIKLTVTMPHIDGMLPVVSTRPLSNFELTLSPDGTRVGNH
RCSNLLDFSEVRTRHGFITAATRNPEAIGGTAPYQYSATLRGESTLRFYRNLHLEACLWE
FVSYYDMSELLSDCGGTIGTDGQVLNLVQSYVTLRVPLYVSYVFHSPVGAGGWQHFDLQS
ELRLTFVYDTAILWRDGIGSPPEAELQGALYPTSMRINEQGRLVVNFRTEARFRGLFVTS
HPASPLTSMIMCTDHPGLTFNLSLVRSEPTYNQPMQQWMFVSDFAVRDYSGTYTVKLLPC
TSPPSLEYTLPPVCNPREPITFDLDIRFQQVSDPVAAEFSLNTQMLLLPKRTLWLSDGSM
GFGQESDTAFSEGDIIYGRVMVDPVQNLGDSFICNIEKVFLCTGADGYVPKYNPDNYEYG
CLADAASLLYRFKIIDKAQPETQARTFGSVSFNALLAVDDPEALSLVRQPGSDGFRLDST
PLFQVSTGREWYIHTIYTVRSRDNANRGIGKRSVERHHITQHHSSRSRRSVSGAPTLAKE
IGVENERGTNILHVALERSSQHRPKVNIQSVVVTTKSKPHDTEDDNVITIVGILVGLVLT
VILLVLVCLLLRSKKDKEVISKPPKASSSTEPMMTPGSDCNDSSEV
NT seq
9321 nt
NT seq
+upstream
nt +downstream
nt
atggctcagagcagatccgagagcgctgtgtggagctttattatggcgctgagtttgctg
gaggtttcctacgtgcgcgggttcgacagcctgggactgagctacggccacaggtccgag
ctctcagaggacgccatactggtggccaacaacggaatccgggttccctttggcagatca
gtgttcattgacccgattaatgatttagtcctgcaggtccgacctggagacaagtgcacc
atcacagtcctggacaacgacccattgtcgcagaaaccgggtcagctcagccctaaaaag
ttcccatgcgagttcggacccagtgatgtgaaatattcccacttcggatcccgcagtcca
gccaaagacagggttcgactccagttaaggtacgacacccagaccgacacggtcatcatc
ccgttcatgatggaggttgaagtgatcttcactcagctggagatactgatcaaaaacatg
cctctgacggttgaaaagcttctaggaacaagtaaccctattgacaataagatcctagag
ttcacctatgatcgaaacatgtaccaatgtaaagtgacctctctcgccggaaccggtgtc
ctgcccaggtatggaaagcttatcgatgacggtaaattgggaaaaatgttcaactgtgat
gaattcctcagactgaatgtacgttatcggcacacgtttgatcagcgctctccgaacaga
gattacatccccatgtatgtagagctccaagacaaggagagcaatgtcataaaacaggag
tttttccaaatcatggtgcgtattaaagaaggagaggaaaacacaccacccaaacctagc
tttgtctccatgatgatgatggaagtcgaccagtttgtcatgaccgccataacccctgac
atgctcgccgctgaagatgtcgaatctccgtctgacgacttgatctttaacattacctct
cctctgtcgttcgaggaaggctatatcgtcagtacagatgataggaatttacccattacg
tctttctatcagggagatctgcaagatcttaaaatagcatacaagcccccttctgaagat
tcggattctgagagaattttccaaatcgagtttgtggttgtagatacagagggagccgtg
tcagacccgttcgcgtttatgatcgtcgttaagcccatgaacaccctggcgccggttgtg
actcgaaacacgggccagctgctctacgaggggcagactagatcactttctagttctcaa
aacctgcagattagcgacgaggacaatttacacgatgtcagagtgacagtgattgacgga
ctgaggcacggcgagctcacagtcatcggctccgggagaaaattcttcaccgtggcagat
ctggatcacggatctgtcgtctaccagcatgatggcagtgacacttatagtgacaatatc
attttccggatgacagacggcaaacatgaagtggaatttctttttcctataaccgtggtg
ccaactgacgacgagccaccaattataaatgccaacacaggtttggtgatgttaaaaaac
cagatgatgcccatttcacctttaatgctcagcgcagctgatatcgactcagaggattcg
actattaaatttgtcctggaggagcctttttcaattataggagaggtgctgcttcgtcag
gcggatgctccggaagacccgtccacgtggaggttcaattcggaagacgagatgtatgag
aaagcagtgacagagtggctgcagcaagacattacagacggaaagttgttttacagacat
gtcggcccacataacaccaaaaccgttacggatcagtttgttttccgggttcaggacgac
aacgacccgccaaatcagtcaggacagaactctttcattatcaaaattctccccgtggat
gacatccctcctgagctttaccctgacaccactttgcagctgaccgtacacgaataccag
ctcactttcctccgcaagaaattcttacgctacaccgatttagactccgaggacagggat
ttgaaatacaccgtcactcagccgccgagagacacggatgagaacaaccctgttattctg
ggagccattgttctcacagaaagcccaaatatagaggttacagagttcactcaagcgcag
ataaatcaccataaaatagcatacaagcctcccgatctggagctagggataactccgcat
gtagtgcagttccattacacggttgaggacacggcaggaaatggtgtcgatggtgcgttc
acgattttcctgcaacctgttgacaacaaaccgccccagattactaacacagggttcacc
gtgttagaacgaggtattcatgtaatcacacgctctgagcttgacaccaccgacccagac
acagacagcacaaagatctcctttacgctcactcaacctcctttacatggcaagatacag
tacatgttcactgatctgaccaaaggggattcgttcaaacttgacgatatttctcaaggc
aggatctcctattcccacaacggagacgagtcgactaatgaattctttcaacttgacgtg
agcgacggcgtccatgttgtcactattaccattaagataaatgtgaagcttattgatgac
gaaactcccaccataacccttccagaaggcacgatcggctcctatattgacgtcttggaa
aacggagctactgaaatcacagctaacgttattcagggacgagatgaagacacagatgac
ctgaggttgacctttatagtcgaggatccgccagttcttggtgaaatactggtcaacggc
ataccggccaacagattcacccaagccgacatcataagtggatttgtcgtgtacgcacac
acgagtggagagattggccttactacaaaagaggacttttttaacttgaccctgacggat
atgtctgatgagtggactgtaggcggcaataaaatcaagggtgttcgagtacacgtaacc
atcctgccaatagacagccagtctcctcaggtgtttgtcggccaccagttcaacgttgtc
gaaggtgaaaaaaatgtcatccaaatagcccacataagcgcttccgatattgacactcct
aacgatgacttgctgtgtacaatcattgttcagcccacatctggctacttggagaacatc
tcacctgctccaggatcagagaaatccaggtctggaactgctatcagcgcgttcaccatc
aaagacatcaaacaaaatcatatctattatgtgcaaagcattcataaaggagtggagccc
gtggaggacaggttcactttcaggtgctcagatggaataaatttttctgagatacacttt
tttcctatcgtgattataccatctaatgacgaaaagcccgagatccatatgagagagttt
gtagtaatggaaggcatgaacgtcgtcattgacactcctatattgaatggtgtcgatgcg
gatgttccaacagacgagctgacatttattgttactaaacctccaaaacatggtttcatt
ataaatcagttgaccactggtactattcctgtaaccaactttactctagaccagataaga
gaggcttctagcattgtttatgagcatgacgattcagaaaccaccgaagacagttttaaa
attcttctcactgatggtaaatttaccgtggaaaagactgtcataattatggttatccca
gtggatgacgaaacaccaaggatggctatcaacgacggccttgaaatagagataggagaa
atcaaggaaatcaccaacaaagttttaaaagccaccgatctggatacaaacgacagcaca
ctgacttatgttatccgatatggtcccaatcagggaatactacaaaaaaggacaccggtt
ggaacgctccaaaacataaccgttggaatgaatttcacacagagtgacattgatgaaaat
ttgattatatacgtccataacggacaggaaggaatacgcgacctcataaaatttgacgtc
acggatggcatcaatcctttgattgacaggtacttctatgtaacaatcggtggaatagat
atggtgttccctgaagttatcagcaaaggcgtttctcttaaggaaggcggcagagtgact
ctgaacacggacctgctcagcaccagtgatctcaacagcccagacgagcacttggtcttc
accatcactcgagctccagtcagaggtcacctggagtgcactgattcgccaggcatgccc
atcagctccttcacccagctccaactggctggaagcaagatctactacatccacaccgca
gatgacgaggttaaaatggacagcttcgagtttgaagtgacggacgggtacaatccggtg
tttcgcactttccggatttccataacggacgtggacaacaagaagcctgtggtcacgatc
cacggcttggtcgttaacgaagggaagagcaagctaatcactccgtttgagttaaccgtg
gaggatcgtgacacagtcgaccgacacctaaagttcaccatcactcaggtgcccattcat
ggaaagctgctgttcaacaacacccgaaccatcacatccttcaccaagcaggatctcaac
gagaacatgatcagctacaagcatgacgggaccgagtctgcttacgacagcttttcgttc
tttgtcacagacggaactcattctgacttttacgtttttcctgatacagtttttgagact
cgtaagccccaggtgatgaaaatcacaattctttctgtagacaacggtattccgcagatt
gtcgtcaacaagggtgggacggccttgaaaacgctgcccggtggtcacctaggacttgtg
atcacaagtaaagcactgaaggccgaggacagagacagttcccatggagctgtgaccttt
agagtaacagtaggcgcggcacacggctacctcatcgacctgggcaagggaaatgccacc
attaccacatttactcaagctgacattgatgacatgcacatatgctacgttcttcgaaat
ggagacaatgctaccagtgacatcttccatttctccattgaagacaacggaggaaacaag
ctgaagaaccaacagttcaggctgacctgggcttggatctccctggagaaggagtattac
gtggtggatgaagaggccaagttcttggaggtggttttgagacggaggggttacctcggc
gagacctcgttcatcagtattggaaccagggatggcacagcagagaaagacaaagatttt
cgtggcaaagcccagaaacaggtccagttcaacccaggccagaccactgccacctggaag
gtccggatcctcggcgaccacctgtacgaacaggcggaaaccttccagattgttctgtct
gagcctgtaatgggggcgcttgagttcccccagacagcaacggtggagataatcgaccct
gaagatgagtccacagtgttcattccttcatcaacgtactcgatcgaggaagacgtcgga
gagtttctcattcctgttcgccggtctggagatgtgagtcaagaactgatggtcatctgt
tttacacagcgaggcacagccactggcaccgtccccaccactgtgctttcctattcggat
tatatctcgcgtccggaagaacacatcagcgttctacgcttcgaccgagatgaaatcgag
aaggcgtgccgtgtggtggtgattgacgattcgttgtatgaacctgaggaaagctttaat
gtcaccctcagcatgcccatggggggtcgcctgggccaggagttccccaccaccaggatc
accatcctgcctgactctgatgacgcgccagtgttttatttcggagacacagagtaccac
gtggacgagagcgacggttatgtggaggtacgggtttggagaacgggatccgatctgtcc
aagacgggaacggttacggtgcgttccagaaaaacagaccccgtttcagcggaagctggt
gtagactacgtcggaatcagtaagaacctggactttgcaccaggcgtcaccatccagacg
atccgtgtcactattctggatgacctgggccagcctgtactggaggggcccgagaggttc
gagctcgtccttcgcatgcccatgaacggcattctgggagagccaagcaaagccaccgtt
ttcatcaacgactccgtgtcagatttgccgaaggtgcagttccgcgatgctaaatacaca
ggtaacgagaacgatggaaagattacggctattatttaccgcagtggagatctgaggttc
aaatccagcgtacgctgctacagccgtcagggttccgctcaggtcatgatggacttcaac
gagagacccaacacggacgcttctgtcatcacatttctgccaggggaagtagagaagccc
tgtgttctcattcttgtcgatgacacggaacacgaagaggtggaggagctccggttggtc
ctggggagccctaaaagcgagtctcctttcgggggggcgtctataggagttcaaaatgag
acactcatcaagattaaggatgatgctgataaggccatcatcaggttcggggttaccaag
ttcagcgtgagcgaacccagtgaggccgggcaggtgtctgtggtgaaggtgccagtgctg
agagtgggagacacctccaaagtgtcagtggtgcgagtgcacactaaagacggctctgcg
acatccggagaggattatcacccggtgtcagaggacgtgatattcaagcaaggagaaacg
gagcatgcggtggatgtcgagatcctgtacgacggagtgcgcgagatgagggaagcgttc
acggtccacctgaagccagatgagaatatggtggctgagattcagatgaccaaagctatc
atttacatcgaggagggaaacagcatggcagatgtcacgttcccctcagtgcctgtggtc
atatcgctgctgcattacgatgacgcagtcggggccccagagagccgaccacccgctggc
tacccagtcatctgcgtcacggcttgcaatcccaaatacccagacttcgagcgcaccggc
tccatctgtgcgagcgagcgcatcaacaacacgctgactcgttatcgctggctcgttagc
gcccccgcaggacctgacggtgtcaccagccctatgagggaggtcgactttgatactttc
ttcacctcgtccaaacgcatcacgctggactcggtgtatttccaggcaggctcacgcatt
cagtgcgcggccagggctgtgaactccaacggagacgagggactcgagcttagcagcgcc
attgtctccgccagtgtggaggagggtttgtgtcagcctcgtgtgataggcgctgtagga
gccgagcctttctccgccaagctgcgctacaccgggcctgaagacccacaccaccccaac
ctcattaaactcaccgtcaccatgccacacatcgacggtatgctccctgtggtctccacc
cgtccactctccaacttcgagctgacactcagtccagacggcacccgcgttggaaatcat
cgctgctcgaacctgttggacttcagcgaggtccgcacgcgtcacggtttcatcaccgcc
gccacccgtaaccctgaggccatcgggggcacggcaccctaccagtacagcgccacctta
aggggggagagcacgctgcgcttctaccgcaatcttcacctcgaggcttgcctctgggag
tttgtcagttattacgacatgtccgagctgctgagtgactgtggagggacaatcgggaca
gacgggcaggtgctgaacctggtgcagtcgtacgtgacgttgcgcgtgccgctgtacgtg
tcgtacgtgttccactctccggtgggcgctggaggctggcagcactttgacctgcagtcc
gagctcagacttaccttcgtctatgacacagccatcctgtggagagatggcatcggcagc
ccgcctgaggccgagctacaaggcgctctctaccccaccagcatgcgcattaatgaacaa
ggtcgcttggtggttaacttccgcacagaagctcgcttcaggggtctgttcgtgacgtcc
caccctgcgtcacctttgacctccatgattatgtgcacggatcaccccgggctgaccttt
aacctcagtctggtgcggagcgagcccacctacaaccagcccatgcagcagtggatgttt
gtctccgactttgcagtgagggattattccggtacctacacagtgaagctgctgccctgt
acttcccctccgagtctggagtacacactgcctccggtgtgcaatccccgagagcccatc
acattcgacctcgacatccgcttccaacaggtgagtgaccctgtagctgcagaattcagc
ctgaacacacagatgctgctgctccctaagaggactctctggctctctgatggctccatg
ggattcgggcaagagagcgacactgcattctctgagggtgacatcatttacggccgtgtc
atggtggatcctgtgcagaacctcggagactcctttatctgcaacatcgagaaggtgttc
ctgtgtacaggagcggatggttacgtgccaaaatacaaccctgacaactatgagtatggc
tgtttagcagatgcagcatccctcctctacaggttcaagatcattgacaaagctcagcca
gagactcaggctagaacattcgggagtgttagcttcaatgctcttctggctgtcgatgac
cctgaggctttgtcgctagtgagacagccaggctcagatggctttaggctggactccaca
cctctgttccaggtatccaccggcagggagtggtacatccacaccatatacaccgtccgt
tccagagacaacgccaaccgaggcattgggaaaaggagcgtggagcgccaccatattact
caacaccactcgtcccgttccagaaggtccgttagcggtgctccaactctggcaaaggag
atcggagtggagaatgagcgcggaaccaacatcctacacgtggctctggagcgcagcagc
cagcacaggcccaaagttaacatccagagcgtggtggttaccacaaagtccaagccgcac
gacacagaggacgataacgtgataacgattgtaggaattctggtcggtctcgtcttgacc
gtcattctcctcgtgcttgtgtgtttgttgttgcgctcgaagaaagacaaggaggtgatc
agcaaacctccgaaggcctccagcagcacggagcccatgatgacacccggctctgactgt
aacgacagctcggaggtgtga
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integrated database retrieval system
