Clarias gariepinus (North African catfish): 128532687
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Entry
128532687 CDS
T10780
Symbol
lrrc8da
Name
(RefSeq) volume-regulated anion channel subunit LRRC8D
KO
K22038
volume-regulated anion channel
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgar04040
]
128532687 (lrrc8da)
Ion channels [BR:
cgar04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
128532687 (lrrc8da)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_9
LRR_5
LRR_R13L1-DRL21
LRR_13
LRR_LRWD1
FTH
Motif
Other DBs
NCBI-GeneID:
128532687
NCBI-ProteinID:
XP_053362745
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All DBs
Position
11:1599331..1607930
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AA seq
827 aa
AA seq
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MFTLTEVASLNDIQPTYRILKPWWDVFMDYLGFVMLMIAIFAGTMQLTKDHVACLPILKE
TTNTNLCMIPSPAEISTSALGNVPVATPDLPDSAVHTISQDAEPKPKGRKTNLDYQQYIF
VNQMCYHVALPWYSKYFPYLVLIHTIVLMVSSNFWFKYPKTSSKIEHFVSILGRCFESPW
TTKALSETACEDSEENKQRLIAGQSGPKQLSTDSQDIVDTNLSQPLLGNANLTFSAEKMV
HEGPSMTILDKKDGEQAKALFEKVRTFRAHVEDSDFIYNLYMVQTIIKAFKLIVILGYTS
TFAAHIDFCHICEPKIEHLTGYDKFFCTHNMAFMLKKLLFTFMAIIGLYCLVCLYALFWL
FRRSLKEYSFEKVREESSFSDIPDVKNDFAFLLHMVDQYDQLHSKRFGIFLSEVSENKLR
EISLNHEWTIEKLRQLVTSNPQDKQELHLFMLSGLPNAVFDLTELEVLKLELIPEVRISA
KVSQMMNLQELHLYNSPAKVEQTGFSFLRDHLRCLYVKFSDVAEIPPWIYLLRSLRELHL
IGSLNSEHNKMIGLESLKDLRHLKTLYLKSNLNKIPSNLTDLSPHLVKLIVHNDGTKLLI
LNSLKKMTSLRELELHHCDLERIPHAIFSLTNLQDLDLKSNSIHTIEEVISFQHLKRLTC
LKLWHNKIVSIPQNISHVKNLESLYLGYNKLETLPAALFYLPKLRYLDIGHNSISVIPGE
VGVLQYLQHFDITANKVEVLPKQLFRCTKLKVLLVGNNSITVLPESIGQLTQLVQLDVKG
NCLDHLPYQLSQCHHLNKNSFVVEDHLFDTLPLEVKESMTEAPTFTA
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgttcaccctaactgaagtggcctccctcaatgacatccagcccacgtatcgaatcctg
aagccgtggtgggacgtcttcatggactacctcggtttcgtaatgttgatgatagccatc
tttgctgggacgatgcagttaaccaaagatcacgtggcgtgtcttcccattctaaaggag
actactaatacaaacttgtgcatgatccctagtccagcagagatctctacatcagcttta
ggcaacgtacccgtagctactccggatcttccggacagtgcagtgcatacaatcagccag
gatgctgagcctaaacccaaaggacgcaaaacgaacttggactatcagcagtacattttt
gtcaatcaaatgtgctaccatgtcgccttgccttggtactctaagtactttccttacctc
gtcctgatccacaccatcgtgttgatggtaagcagcaatttttggttcaaatacccaaag
accagctcaaagatcgagcacttcgtgtccatcctcggcaggtgcttcgagtcaccctgg
accacgaaggcactgtccgaaaccgcgtgcgaagactctgaagaaaacaagcagagactc
attgctggacagtctggtcctaagcagctgtccacagatagccaggacattgtggatacc
aatttgtcccagccactgttaggaaacgccaacctgacattctcagccgagaagatggtt
catgaaggtccaagtatgaccattttagacaaaaaagacggcgagcaagcaaaggcgctt
ttcgagaaagttcggactttccgagctcacgtcgaggacagcgacttcatctataacctc
tacatggtgcagacgatcataaaagcttttaagttaatcgttatcctgggttacacatca
acttttgctgcacacattgatttctgtcatatatgtgaacccaaaattgagcatttaacc
ggatatgataaattcttctgcacccacaatatggccttcatgctgaagaagctacttttt
acgttcatggctatcatcggtctttattgcctcgtgtgcctgtatgcacttttctggctt
tttcgacgttcactcaaggaatattcgtttgaaaaagtcagagaggaaagcagcttcagc
gacatccccgatgtcaaaaacgactttgcgttccttctccacatggttgaccagtatgat
cagttacactccaaacgatttggcatttttctgtcagaggtcagtgagaacaagcttcgc
gaaattagccttaatcacgaatggacaatcgagaaattgcgtcaactcgtgaccagcaac
ccccaagacaagcaagagctgcacttgttcatgctctcgggattgcccaatgctgtattc
gacctcactgagctcgaagttctaaagttggaactcatccccgaggtccggatttcagcc
aaggtttcccagatgatgaatttacaagaacttcatctctataacagtcctgccaaggtg
gaacaaacaggtttcagtttcctccgagatcacctccgctgcctttatgtgaagttcagc
gacgtggcagaaatccctccatggatttacctcctgaggagcctcagggaacttcatttg
attggtagcttgaactcggagcacaacaaaatgatcggtttggaatccctgaaagactta
aggcacctcaagacactatatctcaaaagcaatctcaacaaaatacccagcaacctcaca
gatctttctccacatctggtcaagctgatcgtgcacaatgacgggactaaattgctaatt
ctgaacagtctgaaaaagatgacgagcttgcgcgagttggagctccatcactgcgacctg
gagaggatccctcatgctattttcagcttaacaaacttgcaagatttggatttgaaatct
aacagcatccacaccatcgaagaggtcatcagctttcagcacctgaaaagactgacgtgc
ctcaagttgtggcacaacaagatcgtcagtattccacagaacataagccatgtgaagaac
ctcgaatcgctctaccttgggtacaacaaactggagactctaccagcggctctgttctac
ctgccaaagctccggtacctggatatcggacacaattccatttcggtgattccaggtgaa
gttggagttctccagtacctgcagcactttgatatcacggcaaataaagtagaggttctt
cccaaacagctattcagatgtaccaagctaaaagttctgcttgtgggaaacaacagcatc
accgtgcttccagaatccattggacagttaacgcagctagtgcaactcgacgtgaagggg
aactgcttggatcaccttccgtaccagcttagtcaatgtcaccatcttaacaaaaactcg
ttcgttgtggaggatcacctttttgacacccttccgcttgaggtgaaagaaagcatgact
gaggcgccaacatttacagcttag
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