Clarias gariepinus (North African catfish): 128532694
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Entry
128532694 CDS
T10780
Symbol
gtf2b
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128532694 (gtf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgar03021
]
128532694 (gtf2b)
Transcription machinery [BR:
cgar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
128532694 (gtf2b)
Prokaryotic type
Archaeal type
TFB
128532694 (gtf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
RB_B
BRF2-like_C_cyclin_rpt
Sigma70_r4
KIF9
Harpin
Motif
Other DBs
NCBI-GeneID:
128532694
NCBI-ProteinID:
XP_053362761
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All DBs
Position
11:complement(1581035..1587945)
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AA seq
316 aa
AA seq
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MASTSRVDALPKVQCPNHPDALLVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFTNEKA
TKDPSRVGDAQNPLLNGGDLTTMIGKGTGAASFDEFGNSKYQNRRTMSSSDRAMLNAFKE
ISTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPRTFKEI
CAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATFIARKAV
ELDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAADLF
PPDFKFDTPVDKLPQL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccactagccgtgtagatgctcttcctaaggttcagtgccctaatcaccccgac
gccctgctggtggaggactaccgcgccggcgacatgatctgccccgagtgtggcctcgtc
gtcggtgaccgtgtgatcgatgttggctccgagtggaggacgtttacgaatgagaaagct
accaaagacccgtcacgtgtcggtgacgcccagaacccgctcctgaacggaggagacctg
acgacgatgatcggaaagggaacaggtgccgcaagtttcgacgagttcggtaactcgaag
taccagaaccggcggacgatgagcagctcagaccgagccatgctgaacgcctttaaggag
atcagcactatggcggaccggatcaacctgccccgcaacatcgtcgaccgtacgaataac
ctgtttaagcaggtttatgaacagaagagtctgaagggcaggagtaacgacgccatcgct
tcagcctgcctctacatcgcctgcagacaggagggagtgccccgaacctttaaagagatc
tgcgccgtgtcccggatttccaagaaggagatcggccgctgcttcaagctgatcctgaag
gctctggagacgagcgtggacctcatcaccaccggagacttcatgtcccgtttctgctcc
aatctgggcctgccaaaacaagtgcagatggcggccaccttcatcgccaggaaggctgtg
gagctcgacctggtgccgggacgcagcccgatcagtgtggctgccgccgccatctacatg
gcgtctcaggcctcggccgagaagaagacgcagaaagaaatcggagacatagccggagta
gccgacgtcaccatccgccagtcataccgactcatctacccccgggccgccgatctcttc
cctccagacttcaaattcgacacgccggtggataaactgcctcagctgtga
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