Clarias gariepinus (North African catfish): 128532728
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Entry
128532728 CDS
T10780
Symbol
wu:fb16f03
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 1 isoform X1
KO
K03260
translation initiation factor 4G
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgar03019
]
128532728 (wu:fb16f03)
03012 Translation factors [BR:
cgar03012
]
128532728 (wu:fb16f03)
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
128532728 (wu:fb16f03)
mRNA cycle factors
Stress granule specific factors
128532728 (wu:fb16f03)
Translation factors [BR:
cgar03012
]
Eukaryotic type
Initiation factors
eIF-4
128532728 (wu:fb16f03)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
eIF4G1-like_eIF4E-bd
Cullin
Motif
Other DBs
NCBI-GeneID:
128532728
NCBI-ProteinID:
XP_053362804
LinkDB
All DBs
Position
11:33127386..33155445
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AA seq
1914 aa
AA seq
DB search
MNKVPGPPSSSPLPAPSPNLPQPNFSPTPPPSMVFATPTPPPMNPVGPPRQPYYPVRPTL
PQNPSRAQASSAPRPIPQTPHGTHTPHVFQTGSQMMMIQPQPISFPNSQAPAYYISGQYR
PSFVSPQQYQVAGSPNFYPGSSQAEYAGAYYPAQPQFTPPVAPAPVLMNPAPQQQQAPPP
PQHAAPAKRERKQIIIRDPNQGGKDITEEIMSGGRSASTPTPPQSVLSTSEGGAITQSNG
EKATPPVAAARTDERVKPVVSLEFPVPPGESPIPDAPPTPPPTSPISETVDAPPPAMDKA
TQPKDASQQNPKPSSAGAPSNVSTENGAGLARVSIFLPALGAEPALESPIAQPEELQLVN
GLTADTTNRDISPLAEPDITKEALPIIEEHSPRTTKAVVKVAPAPVASEVAPLPANKEAY
VSSVKETPASVLTPTPVVAGISSIPVVTETLPKVAKDTPSLSVKEIPAPVAKETTASAAK
ESPVINKTPVVPVTPAVKETPVVPVTPAVKETPVVPVTPAAKEIPAAKETPVVPVTPAAK
ETPVVPVTPAAKETPVVPVTPAAKETPVVPVTPAAKEIPVVPVTPAAKEIPVVPVTPAAK
EIPVVPVTPAAKEIPVVPVTPAAKEIPAAKEFPVVPVTPAAKESLVVKEIAVVPVTLAAK
ISPVVPVTPAAKETPVVPVTPAVKETPVVAVIPAVKETPAVKETPVVPVTPAVKETPAVK
EAAVVPVTLAVKETPAVKETPPPAATKTSKPVVKETVVKDPCPVGKKTSEPIVKETPSPS
EPACVAPKATPHPPPPASVEDREDTPPPQAAPPESTMQAVSVPKKKRKLKDLNKKETGDV
LDAFKEPPPPPKTEATPPAKSEQAEPVPVAPPPVEDVEETWEEKEDKLDAENIQPPSPAP
ATPTEQKYQYKEEQWKPLNPEEKKKYDREFLLGFQFISASMHKPEGLPHISDVVLDKVNK
TPLRPLDISRMNCGPDFTPSFALLGRQPSGGRGPPVGLPGPRRSGQSGSRKEPRKIVLSG
VSLNDDIQLNKAEKAWKRGGGADQEDLESVKTQDLLRRVRGVLNKLTPQMFQPLMKQITE
MTIDTEERLKGVIDLVFEKAISEPNFSVAYANMCRCLIGLKVPSGDKPGKPGVNFRKLLL
NRCQKEFEKDQDDDEIFEKKQKELDAAAEEVRQRLKEELEEAKDAARRRSLGNIKFIGEL
FKLKMLTENIMHDCVVKLLKNHDEESLECLCRLLSTIGKDLDFEKARPRMDQYFNQMDKI
IKEKKTSSRIRFMLQDVIDLRRNNWVPRRGDQGPKTIEQIHKDAEMEEQREQIKVQQQLM
SRKDSRGGGGGGGGGGGGSGVTLGPRGVGPASHRGNPPQDDGWNTVPISTKNRPIDTSRL
SKITKPGAMDFNNQLLAPGGKGSWGSWGKGSSGGSGDKPRDSAQDSSRTSTLNRFSALQQ
TPSSTSSLSSSNVETDRRVPQRNSSSRERSDQRGPDRNRPAISKRSFSRDKDEWEQRPAE
TVRRVASMTDERERAREREREREKERPPSKDSVKREPVATPPPAPSKPALSPEELEKKST
AIIEEYLHINDMKEALQCVSELNCASLLYLFVRTGIESTLERSTIAREHMGLLLHQLVKA
GTLSAQQYYKGLMEVLEVAEDMAIDVPHIWDYLAELITPMLHEGGIPIGALFREVSKPLV
PIGNAGLLLAHILTLLCKGMSHKKVGAMWREAGLSWKDFLSKDEDVNKFVTEKGVEYTLG
EESVKVGSSRKSLSMEEISKHLDQHLQDKADNPCIYNWVEANLDEQQVSSNTFVRALMSS
VCQAAIVCETPYKVEAKEITQRAKLLQRYINNEQKELQALYALQSLMVRMEQPPNLLRMF
FDTLYDEDIIKEDAFYKWEASKDPAEQQGKGVALKSVTAFFTWLREAEEESDNS
NT seq
5745 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagtaccaggacccccgtcctcctcccccctccctgcaccctctcctaacctg
ccccagcctaacttctcacccactccacccccatctatggtttttgccacgcccactcca
cctccaatgaaccccgtgggcccaccccgacagccgtactaccctgttcggcccacgtta
ccccaaaacccctcccgagcacaggcaagctccgctccacgtcccatccctcaaacgcca
catgggacacacacccctcacgtcttccagacaggctcccaaatgatgatgatccaaccg
cagccaatcagctttcctaactcgcaggctcctgcatactacatttccggccagtaccgc
ccctcgttcgtttctcctcagcagtaccaggtcgctggatctccgaacttttatcctgga
agcagtcaagctgagtatgctggagcgtactaccccgcccaaccccagttcacacctcct
gtagccccagcacctgtcctcatgaatcctgcccctcagcagcagcaagccccgccccct
cctcagcatgcagcaccggccaaacgggaacgcaaacagataataatacgagaccctaac
caaggaggcaaagatatcacagaggagataatgtccgggggccgcagcgcctccacaccc
acgcctccacagtcagttctgtccacatcagagggtggagccatcacacagtctaatggt
gaaaaagccacgccccctgttgccgcagccagaacagatgagcgtgtaaagcctgtagtg
tccctggagttccctgttcccccaggggaaagccctatcccagatgccccgcccactcca
cctcccaccagcccaatcagtgagacagttgatgctccgcctcctgccatggataaagct
acgcaacccaaagatgcgagtcagcagaacccgaagccctcatcagcaggtgctccttca
aacgtttctacagagaatggggcggggctagcaagagtatctatttttcttcctgctttg
ggggcggaaccagcactcgagtctccaatagcacagccagaggagcttcagcttgtaaac
ggtttaactgcagacacaaccaacagagacatcagccctcttgctgagcctgacatcaca
aaagaggctctgcctattatcgaggaacactcaccacggactaccaaagctgtcgtcaag
gtagctcctgctcctgttgccagtgaggtggcgccccttccggccaacaaggaagcttat
gtctcgagtgtcaaagaaacaccagcctccgtgctgacacccacaccggtcgttgcaggg
atttcttctattcctgttgtaacagaaaccctgcctaaggttgccaaggataccccctca
ttatctgtcaaagagatccctgcaccagttgccaaggaaaccactgcttcagccgcaaag
gagtccccggttataaacaagaccccggttgtcccagtgaccccggccgtgaaggagacc
ccggttgtcccagtgaccccggccgtgaaggagaccccggttgtcccagtgaccccggcc
gcaaaggagatcccggccgcaaaggagaccccggttgtcccagtgaccccggccgcaaag
gagaccccggttgtcccagtgaccccggccgcaaaggagaccccggttgtcccagtgacc
ccggccgcaaaggagaccccggttgtcccagtgaccccggccgcaaaggagatcccggtt
gtcccagtgaccccggccgcaaaggagatcccggttgtcccagtgaccccggccgcaaag
gagatcccggttgtcccagtgaccccggccgcaaaggagatcccggttgtcccagtgacc
ccggccgcaaaggagatcccggccgcaaaggagttcccggttgtcccagtgaccccggcc
gcaaaggagtccctggtcgttaaggagatcgcggttgtcccagtgaccctcgctgcaaag
atttccccggttgtcccagtgaccccggccgcaaaggagaccccagttgtcccagtgacc
ccggcagttaaggagaccccggttgtcgcagtgatcccggccgttaaagagaccccggca
gttaaggagaccccggttgtcccagtgaccccggcagttaaggagaccccggctgtaaag
gaggccgcggttgtcccagtgaccctcgccgtaaaggagaccccagctgtgaaggagacc
cctcctccagctgccacaaaaactagcaagcctgttgtcaaagaaactgttgtcaaggat
ccttgtcctgttggtaaaaagacctcagaacccatcgtcaaggaaaccccaagtccctcg
gagcctgcctgtgttgctcccaaagccacacctcatcctcctcctcctgcctctgttgag
gacagagaggacacgccccctccacaggcagcgccaccagagagcactatgcaagctgtt
tctgtgccaaagaagaagagaaagttgaaggacctaaacaagaaggagactggtgatgtg
ctggatgcctttaaagagccgccaccaccaccgaagactgaagccacgccccctgcaaaa
tcggagcaagccgagcctgtccctgtagctccgccccctgtagaagacgtggaagagacc
tgggaggaaaaggaggacaagctcgatgccgaaaacattcagccacccagccctgcccca
gccacgcccaccgagcaaaaataccagtacaaagaggaacagtggaaaccgctgaaccct
gaggagaagaagaaatatgaccgcgagtttctgctgggctttcagttcatcagcgccagc
atgcacaaaccagagggtctccctcacatcagtgacgtggtgctggataaggtgaataaa
actcctctgcggccgttggacatcagcaggatgaactgtggtccagacttcaccccctca
tttgctcttttgggccgacagccatctggtgggcgtggcccgcctgtgggtttgcccggc
ccgaggcgctcgggtcagtccgggtcgcgtaaggagccaaggaagatcgtcctgtccgga
gtgtccctgaatgacgacattcagctgaacaaggcggagaaggcgtggaagcgagggggc
ggagctgaccaggaggacctggagtcggtaaagacacaggatctgctgcggcgtgtccgg
ggtgtcctgaacaaactgacccctcagatgttccagccactgatgaagcagatcacggag
atgaccattgacacagaggagcggctaaagggcgtgatagacctggtgttcgagaaagcc
atctccgagcccaacttctctgtcgcctacgcgaacatgtgccgctgcctcatcgggttg
aaagtgcctagcggcgataaaccaggcaagccgggtgtgaatttccgaaagcttctcctg
aaccgctgccagaaagagtttgagaaggaccaggacgatgacgagatttttgagaagaaa
caaaaggagcttgacgctgccgctgaggaggtgcgccagcgtctaaaagaggaattagaa
gaggcgaaggacgcggcacggcgccgctcgctcggcaacatcaagtttataggtgagctc
ttcaagctgaagatgctcacagagaacatcatgcacgactgcgtggtcaaactgctgaag
aaccacgacgaggagagcctggagtgtttgtgcaggctgctgtccaccatcggcaaggac
ctggacttcgagaaggccaggcctcgtatggatcagtattttaaccagatggacaagatc
attaaagaaaagaagacgtcatccagaatccgctttatgctgcaagacgtcatcgactta
agacgaaataactgggtgcccaggcgaggagatcagggccccaagaccatcgagcagatc
cataaggatgccgagatggaggagcagcgagagcagattaaagtccagcagcagctcatg
tccaggaaggattcacgaggaggaggagggggagggggaggaggcggtggaggaagtggt
gtgaccctgggccctcggggtgttggccccgcttcacaccgcggaaaccctccacaagac
gacggctggaacacggtgcccatctccaccaagaaccggcccatcgacaccagtcgcctc
agcaagatcaccaagcctggagccatggactttaacaaccagcttcttgcccctggtggc
aaaggatcatggggcagctggggcaaagggagcagtggaggctcgggggataaaccccgt
gatagtgctcaagactcgagccgtacgagcacactgaatcgcttctccgccctgcagcag
actccttcctccacctcatccttgtcctcctccaacgtggagaccgataggagagttcca
caaaggaacagctcgagtcgagagcgcagtgaccagcgtggtccagaccgaaaccggccc
gccatcagtaagcgcagcttcagcagagacaaagacgagtgggagcagagaccggccgag
acggtgcggcgagtcgctagcatgaccgacgagcgggagcgagctagagagcgagaacga
gagcgcgagaaagaacgaccaccgagcaaagacagcgtaaagcgagaacctgtcgccaca
ccacctcctgctccgtctaaaccagctctgagccccgaggaacttgagaagaaatccacg
gccatcattgaggagtacttgcatatcaatgacatgaaggaggcgctgcagtgtgtgagc
gagctgaactgcgcctcattgctctacttgtttgtgaggaccggaatcgagtcgactctg
gagcgcagcaccatcgccagagagcacatgggcttactgctgcaccagctcgtcaaggcg
ggaacgctgtcggcacagcagtactacaaagggctgatggaggtgctggaggtggctgag
gacatggccatagacgtgcctcatatctgggattacctggctgagctgatcacacccatg
ctgcacgagggcgggattcccataggcgcgctcttcagggaagtgtcgaagcctctggta
cctatcggcaacgctggacttctgttggcacacatcctgaccctgctctgcaaaggaatg
agccataagaaggtcggagccatgtggagggaggcggggcttagctggaaggacttcctg
tctaaagacgaagatgtcaacaaatttgtgactgagaagggagtagagtacacgctgggt
gaggagagtgtaaaagttggtagcagtaggaaatccctgagcatggaggagatctccaaa
catctggaccagcatttacaggacaaagctgacaatccatgcatctacaactgggtggag
gcgaacctggacgagcagcaggtttcctcaaacacctttgtgcgagctctgatgtcctcc
gtctgtcaggctgctatcgtttgtgaaaccccatataaagtggaggctaaagagattacc
cagagggccaagctgctccagcgctacattaataacgagcagaaggagttgcaggcgctc
tacgccttacagagcctcatggtgcggatggagcagccgccaaacttgttgcgaatgttt
tttgacacgctttacgacgaggacatcattaaggaagacgctttctacaaatgggaggcg
agcaaagatcctgccgagcagcagggaaagggcgtcgccctcaaatccgtcacagccttt
ttcacttggctccgcgaggccgaggaggaatcggacaacagctaa
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