Clarias gariepinus (North African catfish): 128532734
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Entry
128532734 CDS
T10780
Symbol
u2surp
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128532734 (u2surp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgar03041
]
128532734 (u2surp)
Spliceosome [BR:
cgar03041
]
Complex A
U2 snRNP components
U2 related factors
128532734 (u2surp)
Complex B
128532734 (u2surp)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
SET_assoc
RRM_7
DUF2299
Motif
Other DBs
NCBI-GeneID:
128532734
NCBI-ProteinID:
XP_053362816
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Position
11:complement(309909..324878)
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AA seq
959 aa
AA seq
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MADRTAGGTPKASAKSLLESKLKAFSIGKMAVAKRTLSKKEQDELKKKEDEKAAAEIYEE
FLAAFEGGEGRVKTFVRGGIANATREEAAADEKRGKLYKPRSKLPEAKTFLPLETPPQFL
TLDKRNALKKTEKEKKKSNLELFKEELKQIQEERDERHRMKGRVSRFEPLPNVEGRRSFL
DESAPGSHDVGDPTTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARER
NCGFVAFMTRKDAERALKHLNGKMIMNFEMKLGWGKGVPIPPHPIYIPPSMMQHTLPPPP
SGLPFNAQPKERLKNPNAPMPPPPKNKDEFEKTLSQAIVKVVIPTERNLLSLIHRMIEFV
VREGPMFEAMIMNREINNPLYRFLFENQSPAHVYYRWKLYSILQGDSPTKWRTDDFRVFK
NGSLWRPPPLNPYLHGTPQEEEEEEQQEEDEEEEGSRKGSLKDDERDKLEELLRGLTPRR
SDVAEAMLFCLTHADAAEEIVECIAESLSILKTPLPKKIARLYLVSDVLYNSSAKVANAS
YYRKFFEIKLCQIFSDLNATFKTIQGHLQSENFKQRVMSCFRAWEEWAVYPDPFLIKLQN
IFLGLVNLDPEKEAEVPEPTEQAEDLDGAPIVEEELDGAPLEDVDGMPIDGAPLDGVVLD
DLDGVPIKGSEEELDGLPLDGLKPGFKMAPSKWEEVDGAALEAQAVTTSKWEVFDLPDES
EKSDERKAHEDEVKETVMKSSSSEAQSQAQPAREEHQDSKSAKLSEISEEKRAKLREIEL
KVMKFQDELESGKRPKKPGQSIQEQVELYRDKLLQREKEKEVEKDKEKEKEKKDKDKSDT
SHKEKEKDESLSNRKEKKRRHSPSPSPSRSSSSARRLRSPSPRSERADRSHTKDTSRSSY
RDSPRDSSRKSSKRSPSPSATPKRSRRSRSRTPKKSSKKSRSRSRSPHRSHKKSKKSKH
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaggacggccggcgggacgccgaaggccagcgctaagtcactgttggagagt
aaactgaaggccttcagcatcgggaaaatggccgtggctaaacgaactctgagtaaaaag
gaacaggacgagctgaagaagaaggaggatgagaaagcagctgcagagatctatgaggaa
ttcctcgctgcgtttgagggaggtgaaggacgagtgaagacttttgtccgaggaggaatt
gccaatgccactagagaggaagctgcagctgatgagaagagaggaaaactttacaaaccc
aggtctaaactcccggaggcgaaaaccttcctccctctggagactcctcctcagttcctc
actttagacaaacgcaacgctctgaagaaaacagagaaagagaagaaaaagagcaacttg
gagctgtttaaggaagaactgaaacagatccaagaggagcgagatgaacgtcacaggatg
aagggacgagtcagtagatttgagccactgcccaatgtggagggaagacgatccttttta
gatgaatctgctccgggctcacatgatgttggagatcctacaaccaccaacctgtacctg
ggcaacatcaaccctcagatgaacgaggagatgttgtgccaggagtttggccggtacggg
ccgttggcgagtgtgaagatcatgtggcccaggacagatgaggagagagctcgggagaga
aactgtggttttgtggccttcatgacgaggaaagatgcagagcgagcgcttaaacactta
aatggaaaaatgataatgaactttgaaatgaagcttggctggggcaaaggcgtgcccatc
cccccccaccccatctacatccctccgtccatgatgcagcacacactccctcctcctccc
tcgggtctgcccttcaacgctcagcccaaagagaggctgaagaaccccaacgcccccatg
cccccgcctcccaagaacaaagacgagtttgagaagactctgtcgcaagccatagtcaaa
gtggttatcccaacagaaaggaatctgctctctctaatccaccggatgatcgagtttgtg
gtgcgtgagggtcccatgtttgaggccatgataatgaacagagaaattaacaacccgtta
tacaggtttttatttgaaaatcagagcccagctcatgtgtattatcgttggaagttatac
tccatcctgcagggagactctccaactaaatggagaacagacgacttcagggtgtttaag
aacggctcgttatggaggccgcctcccctgaacccttacctgcacggcacgcctcaggag
gaggaggaggaggagcagcaggaggaagacgaggaggaggaaggctccaggaaaggatct
ctaaaagacgatgagagagataaactggaggagctcctgcgaggtctcacccccaggcgg
agtgacgttgccgaggccatgctgttctgtctgactcacgcggacgccgcggaggagata
gtggagtgtatcgccgagtctctgtccatcctgaaaacgccgcttcccaaaaagatcgcg
aggttatatttggtgtctgatgtgttgtataactcctcggctaaagtcgctaacgcctcc
tattatcggaaattctttgagattaaactgtgtcagatattctctgacctcaacgccacc
tttaagaccatccagggccacttacagtctgagaactttaagcaaagagtgatgtcgtgt
ttccgagcgtgggaagagtgggccgtgtatcctgacccttttctcatcaaactccagaac
attttcctgggtctcgtcaatctggatccagaaaaggaagcagaagtgcctgagcccact
gaacaggctgaggatttggatggtgcccccatcgtggaggaggagttggatggagctcct
ttagaggatgttgacggtatgccaattgatggagctccactagatggcgtcgtgttggac
gaccttgacggtgttccgataaaaggatcagaggaagaactagacggactccctctggac
ggtctgaagcccgggtttaaaatggctccgtctaagtgggaggaggtagacggagctgct
ttggaggctcaggctgtcactacgtcaaagtgggaagtgtttgatttgcctgatgagtct
gagaaaagtgatgagaggaaagcacatgaagatgaggtgaaggagactgtgatgaagagt
tcctcatcagaagcgcagtctcaggcccagcccgctagagaggaacatcaggactctaaa
tcagccaaactctcagagataagcgaagagaaacgcgctaaactgcgagagattgagctc
aaagtgatgaagtttcaggacgagctggaatctgggaaacggcccaaaaaacctggacag
agcattcaggagcaggtggagctctacagggacaaactactgcagagggaaaaggaaaaa
gaagtggagaaagataaagagaaggaaaaagagaaaaaggacaaggacaaatctgacacg
agtcataaagagaaagaaaaagatgagtccttgtccaatagaaaagaaaagaagcgcaga
cacagtccgtctcccagtccgagtcgcagcagcagcagcgcccgtcgcctccgatctcca
tcgccgcgctccgagcgcgctgaccgttctcacaccaaggacacctcgcgctcctcctac
agagactcgcccagagacagcagccggaaatcttccaaacggtcaccctccccctcagcc
acacccaaacgctcccgcaggtcgagatcacgaacacccaaaaaatcctccaagaaatcc
cgctcccgttcccgctcaccacaccgctcacacaaaaaatccaaaaagagcaaacactga
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