Clarias gariepinus (North African catfish): 128532750
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Entry
128532750 CDS
T10780
Name
(RefSeq) tubulin alpha chain-like isoform X1
KO
K07374
tubulin alpha
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04145
Phagosome
cgar04210
Apoptosis
cgar04530
Tight junction
cgar04540
Gap junction
cgar04814
Motor proteins
cgar05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128532750
09143 Cell growth and death
04210 Apoptosis
128532750
09144 Cellular community - eukaryotes
04530 Tight junction
128532750
04540 Gap junction
128532750
09142 Cell motility
04814 Motor proteins
128532750
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128532750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgar03019
]
128532750
03036 Chromosome and associated proteins [BR:
cgar03036
]
128532750
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgar04812
]
128532750
04147 Exosome [BR:
cgar04147
]
128532750
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128532750
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
128532750
Cytoskeleton proteins [BR:
cgar04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
128532750
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128532750
Exosomal proteins of other body fluids (saliva and urine)
128532750
Exosomal proteins of colorectal cancer cells
128532750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
128532750
NCBI-ProteinID:
XP_053362835
LinkDB
All DBs
Position
11:complement(22308644..22313514)
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISIHLGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKELIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLLERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVSEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGADSIDGEGEEEGEEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgcatctctatccacctgggtcaggctggtgtgcagattggcaatgcctgc
tgggaactctactgccttgaacatggcattcagccggatggacagatgcccagcgacaaa
accattggcggtggagacgattccttcaacacctttttcagtgagactggagctgggaaa
catgtccccagggctgtgtttgtggatctggagcccactgtcatagatgaggtccgcact
ggaacataccgccagctgtttcaccctgagcagctcatcacaggaaaggaggacgctgcc
aacaactatgcccgtggtcactacactattggcaaggaactaattgacctggtgctggac
aggatccgtaaactggctgaccagtgcacaggtctccagggtttcctggtctttcacagc
tttggtggtggaaccggttctggtttcacttccctgctgttggagcgcctgtctgttgac
tacggtaagaagtccaagctggagttcgccatctacccagctcctcaggtctctactgct
gtggtggagccctacaactccatcctgaccacccacaccaccctagagcactcagactgt
gccttcatggtggacaatgaagccatctatgacatttgtcgtaggaacctagatattgag
cgtcctacatacactaacctaaacaggttgattagtcagattgtatcctccatcactgcc
tccctccgtttcgatggtgccctcaatgtcgatctcactgaatttcaaaccaacttagtg
ccctaccctcgtattcatttcccattagtcacctatgctcctgtgatctctgcagaaaag
gcttaccatgagcagctctctgtatctgaaatcacaaatgcctgctttgagccggccaat
cagatggtgaaatgtgacccacgtcatggtaagtacatggcctgctgtctgctataccgt
ggtgatgtggtgcctaaagatgtgaactctgcaatcgcaaccatcaagacaaagcgcacc
atccagtttgtggactggtgtcccactgggttcaaggtgggcatcaattaccagcctccc
actgtggttccaggtggagacctggccaaggtgcagagggctgtgtgcatgctgagcaac
accacagccattgcagaagcctgggcgcgtcttgatcataagtttgatctgatgtatgcc
aagcgtgcttttgtgcactggtatgttggtgagggtatggaggaaggtgagttttctgag
gccagagaggacatggctgccctggagaaggattatgaggaggttggtgctgactccatt
gatggcgagggagaagaagaaggagaggagtattaa
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