Clarias gariepinus (North African catfish): 128532915
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Entry
128532915 CDS
T10780
Symbol
nbeab
Name
(RefSeq) neurobeachin
KO
K24183
neurobeachin
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128532915 (nbeab)
Membrane trafficking [BR:
cgar04131
]
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
128532915 (nbeab)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
Neurobeachin
Beta-prop_IFT122_1st
WD40
Laminin_G_3
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_EML
Beta-prop_WDR75_1st
PIGA
Motif
Other DBs
NCBI-GeneID:
128532915
NCBI-ProteinID:
XP_053363030
LinkDB
All DBs
Position
11:5884453..6272218
Genome browser
AA seq
2874 aa
AA seq
DB search
MMMMASETALVAPGRGGGGGGGGGGQQRATAGSVTGEAAASGSACSGSVLLASGGLNPAV
PIRNIRTKFAVLAGLIRAGEVSDRDIAETVLNLLVGGEFDLEMNFIIQDAESIVCMVELL
EHCQVTCQAEIWSMFTAILRKSMRNLQTCTEVGLIQLVLLKMSSVDDMIADLLVDMLGVL
ASYSITVKELKLLFSMLRGEGGLWPRHAVKLLTVLNQMPQRHGPDAFFNFPGRSAAAIAL
PPIAKWPYQNGFSLNTWFRMDPLNNINVDKDKPYLYCFRTCKGVGYSAHFVGNCLIVTSL
KSKGKGFQHCVKYDFQPRKWYMISIVHIYNRWRNSEIRCYVNGQLVSYGDMAWHVNTNDS
YDKCFLGSSETADANRVFCGQLGAIYVFSEALNPAQIFAIHQLGPSYKSTFKFKSESDIH
LAEHHKQVLYDGKLASSICFTYNAKATDAQLCLESSPRENASIFVHSPHALMLQDVKAIV
THSIHSAIHSIGGIQVLFPLFSQLDFHQHSESQVETTVCASLLGFLVELLKSSVAMQEQM
LGGKGFLVIGYLLEKSSRVHITRAVLEQFLGFAKYLDGLSHGAPLLKQLCDHILFNAAIW
IHTPAKVQLSLYTYLSAEFIGTATIYNTIRRVGTVLQLMHTLKYYYWAVNPAPCSSITPR
GLDGPRPTQKEIISLRAFMLLFLKQLILKDRGVKEDELQSIQNYLLTMNEDENLHDVLQL
LVALMSEHPTSMIPAFDQRNGIRVVYKLLASKSESIRVQALKVLGYFLKHLGHKRKVEIM
HTHSLFTLLGERLMLHTSTVSVTTYNTLYEILTEQVCTQVVHKPHPEPDSSVKIQNPMIL
KVVATLLKNSTPSAELMEVRRLFLSDMIKLFSNSRENRRCLLQCSVWQDWMFSLGYINPK
NSEEQKITEMVYNIFRILLYHAIKHEWGGWRVWVDTLSIAHSKVTYEAHKEYLAKMYEEY
QRQEEENIKKGKKGLVSTISGLSAQSSAIKGTLELDDHSQTQTPESEVDDSEATDPTRSL
LSEAKGTNMDAVSGVQVEVHDLLVDIKAEKVEATEVKLEDMETLGVTESGNLVEVDSLLD
NVYSAAVEKLNNNVNNVLVAKSNLEDKNSGPLISLAEDKDAVPSGSTFLFSSVGTSASEN
LLPKIAPSEPLPLGSGHHQVRTSTSDLGLLVHMASGSEVSSNTAVLEDCFKLQADLGTFS
SSCQGEISAKNHEQTVTIAPEVEVSGSKSSVDATSGTLDAERSDDSKDKEIKKIQTTTTT
QDVHGRAGGLMDRDMRVDLGFRAMPLSEDQRHQFSPGPRTTMFRIPEFKWSPMHQRLLTD
LLFTLEADLHVWRSHSTKSVMDFVNSNENIIFVHNTIHLISQMVDNIIIACGGILPLLSA
ATSPSNTKAEMEGIEATQGMSSETAVTFLTRLMSMVDVLVFGSSLNFSEIEAEKNMSSGG
LMRQCLRLVCCVAVRSCLECRLRHRDRGMKSFVSCLKAQESMQSCSKTIDNFPSNMSPIK
DPDRLLQDVDINRLRAVVFRDVDDGKQAQFLALAVVYFISVLMVSKYRDILEPQRETTRA
ISQFGRSIRHEINSPTSTENPLTFPDSTKDPSLVHEPHAEMSLPHSDSGLGDESASCMFN
GAELEPGSRGPDGLRGILCTLSPEAKAQESLAEADLLKPAASISSISQSNKGINVKEILK
SLVAAPLDASESGPEPMAYPENHVLKRETQAMMPMQFHSFDRSVVVPAKKPPAGSMALNT
VVTSGSSMASSGSTPNIFTAASATPKSMINTTGATEPSTSSSSSSSSFVNGATSKNLPAV
QTVGPMPEDTMENMSITAKLERALEKVAPLLREIFVDFAPFLSRTLLGSHGQELLIEGLV
CMKSSTSVVELVMLLCSQEWQNSIQKNAGLAFIELINEGRLLCHAMKDHIVRVANEAEFI
LNRQRAEDVHKHAEFESNCAQYAVDRREEEKMCDHLISAAKHRDRVTANQLKQKIVNILT
NKHGAWGALTHSQLHDFWRLDYWEDDLRRRRRFVRNPFGSTHLDISCKSLEDYGHEEEDM
LKGRKTFRGHTVANQSPEVELMLEGEDDAVSLLQDKDMDNLAGPVLMSTPAQLVAPILVA
RGTLSITTSEIYFEVDEEDPGFKRTDPRVLVYSEGLHGKWMFSEIRAVFARRYLLQNTAL
EVFMANRTSVMFNFPDQPTVKKVVYSLPRVGVGTSYGLPQARRISLATPRQLFKSSNMTQ
RWQRREISNFEYLMFLNTIAGRTYNDLNQYPVFPWVLTNYESEELDLTLPGNFRDLSKPI
GALNPKRAVFYAERYEAWDDEAPPCHYSTHYSSAASTLHWLIRIEPFTTFFLSSNGNKFH
HPNRTFSGITRSWRHCQRDTSDVKELIPEFYYLPEMFVNSNGYGLGDRDDGAPVCDVELP
AWAKTPEDFVRINRMALESEFVSCQLHQWIDLIFGYKQRGPEAVRALNVFHHLTYEGFVN
LDSLASDLLLREAMEAQIQSIGQTPSQLLIEPHPPRSSAMHLSPLMFKEQMQQDVIMVLK
FPSNSPVTHVAANTLPHLAMPAVVTVTCSRLFAVNRWHNTVGLRGAPGYSLEQAHHLPIE
MDSVIANNTGTNKRQITDLVDQSIQINSQCFVVTADNRYVLVCGFWDKSFRVYSSETGKL
TQIVFGHWDVVTCLARSESYIGGDCYVVSGSRDATLLLWYWSGRHHIIGDNPNNSDYPAP
RAVLTGHDYEVVCVSVCAELGLVISGAKEGPCLVHTITGDLLRALEGPDTCSLPRLISVS
SEGHCIICYERGQFCNFSINGKLLAQMEINDTTRAMLLSSDGQTLVTGGDNGVVEVWQGC
DFKQLYIYPGCDAGIRAMDLSHDQRTLITGMASGSIVAFNIDFNRWHYEHQNRY
NT seq
8625 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcgagtgagacggcgctggtcgctccgggccgcggaggaggaggtgga
ggaggtggaggaggacagcagcgcgcgaccgcgggttccgtcacgggcgaggcggctgcg
tcagggtccgcgtgctccggctccgtgctcctggcatccggcgggctcaaccccgccgtg
cccatccgcaacatcaggaccaagttcgccgtgctcgcgggtctcatccgggccggcgag
gtgagcgacagggacatcgcggagaccgtcctcaacctgttggtaggtggtgaattcgac
ctggaaatgaacttcatcatccaggatgcagagagcatcgtgtgtatggtggagcttctc
gagcactgccaggtgacgtgccaagccgagatctggagcatgttcacggctatcctgcgc
aagagcatgcgtaacctacaaacctgcaccgaggtgggcctgatccagcttgtgctgctg
aaaatgagttcagtcgatgacatgatcgcagatctgttggtggacatgctgggagttctg
gccagctacagtatcactgtgaaggagctgaagctgctcttcagtatgctcagaggagag
ggtggattgtggccgagacacgcagtgaaactgcttactgtcctgaatcagatgccacag
agacatggaccggatgctttcttcaacttcccgggtcgtagtgctgctgcgattgcttta
cctcccatcgccaagtggccttaccagaacggcttcagtcttaacacatggttccgcatg
gatcccctcaacaacatcaacgtggacaaggacaagccctacctttactgctttcggacc
tgtaaaggtgttggttattcagctcattttgtgggaaactgcttgatcgtgacatcactc
aaatccaaaggaaaaggcttccagcactgcgtgaagtatgactttcagccacgaaagtgg
tacatgatcagcatcgtacacatttacaaccgctggaggaacagtgaaatccgctgctac
gtcaacgggcagctggtctcatacggcgatatggcttggcacgtcaacactaatgatagc
tatgacaaatgtttcctgggctcgtcagagacagcggatgctaaccgagtgttctgtgga
cagctcggtgccatctatgtgttcagcgaagctctcaacccagcacagatcttcgccatc
catcagctggggccgagttacaagagcacttttaagtttaagtcggagagtgatatccat
ctggctgagcatcataagcaggtgttgtatgatgggaagttggccagcagcatctgcttt
acctacaacgctaaagccacggacgctcaactatgtctggagtcctctcccagagagaac
gcttctatctttgtccactcgccacatgccctcatgctgcaggacgtaaaggcgattgtt
acccactccatccacagcgccattcactccatcgggggcattcaggttctgtttcctctt
ttctcccagcttgacttccaccaacacagcgaaagtcaggtggaaaccacagtttgcgcc
agtcttctgggtttcctggtggagttgctgaagagctctgtggccatgcaggagcagatg
ctgggaggaaaaggcttcctggtgattggatacctattggaaaagtcatcacgggtgcac
atcaccagggctgtgctggagcagttcctgggtttcgcaaagtacctggacggcctgagc
cacggcgccccgcttctcaagcagctgtgtgaccacatcctgtttaacgcggctatctgg
atccacactccggccaaggtccagctctcgctttacacgtacctgtcggccgaatttatt
ggcactgcgacgatctacaacaccatcaggcgtgtgggaacggttctgcagctcatgcac
actttgaagtactactactgggctgttaaccctgcaccctgcagctccatcactcccaga
ggcctggatggaccacgtcctacccagaaggagatcatttcactgagggctttcatgctg
ctcttcctcaagcagctcatactcaaggatcgtggagtgaaggaggatgaactacagagc
atacagaactatttgctgaccatgaatgaggacgagaacctccatgatgttctgcaactg
ctcgtggctctgatgtcagaacatcccacatcaatgatcccggcctttgaccagaggaac
ggcatccgagtcgtctacaagctgttggcgtctaagagtgagagcatccgcgtgcaggcg
ctgaaggtgttgggctacttccttaaacacctcggtcacaagagaaaggtggaaatcatg
cacacgcacagcctttttacgcttctcggagagagactcatgctacacaccagcacggtg
tcagttacaacctataacacactgtatgagatcctgactgagcaggtgtgtacacaggtt
gttcacaaaccacatcccgaacctgactctagtgtgaagatacagaacccgatgatcctg
aaggtggtagccacgctgctgaagaattcgacaccgagcgctgagctgatggaggtgcgg
cgtcttttcctctccgacatgatcaaactgttcagcaacagccgagagaacagacgttgt
ctgctccagtgctcggtgtggcaggactggatgttctcactgggctacattaacccaaag
aactctgaagagcagaagattaccgagatggtctacaacatcttccgcatcctgctctac
catgcaatcaagcatgaatggggtggatggcgtgtatgggtggacaccctctccatagcc
cactccaaagtgacatatgaagctcataaagagtacttagccaagatgtatgaagaatac
cagcgccaggaggaggaaaatattaaaaaggggaagaaaggtctagtcagtactatctct
ggcctctcagcccaatcctctgccattaagggtaccctggagcttgatgaccattctcaa
acacaaacccccgagagcgaggtggatgactctgaggccactgaccccacacgcagcctt
ctctccgaagccaaaggaaccaatatggatgcagtgtcaggtgtacaggttgaggttcat
gacctacttgttgacattaaggctgagaaagttgaggctacagaggttaagctggaagac
atggagacgctgggagtcacagaaagtgggaatctagtagaggttgattctctcctagac
aacgtctactcagctgccgtggagaagctaaacaacaatgtaaacaatgtcttggttgct
aaatccaacttggaggacaagaattcaggacctctgatcagtctagctgaggacaaagac
gctgtgcccagtggcagcacttttctcttttcctcagtgggcactagtgcatctgagaat
ctgttgcccaaaattgcaccatctgaacccttgcctcttggaagtggccaccaccaagtc
cgtaccagcaccagtgacttgggtttgttggtgcacatggctagtggatcagaagtaagc
tccaacactgcagttcttgaggactgcttcaaacttcaggctgatttggggactttcagt
tcttcatgtcagggagaaatctctgccaagaaccatgagcagactgtcacaatagctcca
gaggttgaagtatctggaagtaagagcagtgtagatgccaccagtggcaccttagacgca
gagaggtctgatgacagcaaagataaggaaatcaagaagatccagaccactaccacaaca
caggatgtccatggcagagcaggtggactgatggacagggacatgagggtggatctcggc
ttcagggccatgcctttgagtgaggatcagcgccatcagttcagcccgggtcctcgcacc
accatgttccgtatccccgagttcaaatggtcgccgatgcaccagcgcttactcactgac
ctgctcttcaccctcgaggcagacctgcacgtgtggaggagccactcgaccaagtcagtc
atggactttgtgaacagcaatgagaacatcatatttgtgcacaacaccattcacctcatc
tcacagatggtggacaacatcatcatcgcctgcggagggatccttcctctgctctcggct
gccacgtccccgtctaatactaaggcggagatggaagggatcgaggcgacccaggggatg
tcctcagagactgccgtgaccttcctgacacgcctcatgtccatggtggacgtgttggtg
ttcggcagctcgctcaacttcagcgagattgaggcggagaaaaacatgtcctcaggagga
ctgatgcgccagtgtctcagacttgtgtgttgtgttgctgtgaggagttgtttagagtgc
agactgcgtcacagggacaggggaatgaagtcctttgtgtcctgtttgaaggctcaggag
agcatgcagagctgcagcaagactatagataatttccccagcaacatgtctcctattaag
gacccagatcgtctcctacaggatgtggacatcaaccgactgcgtgccgttgttttccga
gatgtcgatgacgggaagcaggcgcagttcctggccctggctgtggtctacttcatctct
gtcctaatggtgtccaagtatcgtgacatcttggagccacagcgcgagacgaccagggct
atcagccaattcgggaggagcattcgccacgaaatcaactcccccaccagcacagaaaac
ccactgacattcccagacagcactaaagatccctctttggtccatgagccacatgctgaa
atgtctctgccccattcagactccgggctcggggacgagtctgcatcctgcatgtttaac
ggagccgaactggaacctggttccagaggaccagacggcctacgtgggatcctctgcacc
ctctctcccgaggctaaagcccaggaaagcttggctgaagcagatctcctgaagcctgct
gcctctatttccagcatcagccaatccaacaagggcatcaacgtcaaggagatcctcaag
agtctggtagcagctcccttggatgccagtgagagtggcccagaaccgatggcgtatcct
gaaaatcatgtattgaagcgggagactcaggccatgatgccaatgcagttccattcattt
gacaggagtgtggtagtcccggctaagaagcctcctgcaggcagcatggcgcttaacact
gtggtcacttctggttcctccatggcaagctcgggaagcactcccaacatcttcactgcg
gcttccgctacacctaaaagcatgatcaacaccacaggagctacagaaccttccacttcc
tccagctcatcttcatccagctttgtaaatggagccaccagtaagaacctgcctgcagtg
cagacggtcgggcccatgcccgaggacaccatggagaacatgagtatcactgctaagttg
gagcgagccctggagaaggtcgccccgttactgagggagatctttgtggactttgccccg
ttcctgagccgcactctcctgggcagccatggccaagagcttcttatagaaggtctggtg
tgtatgaagtcgagtacctcggtggtggagctggtcatgctgctttgctctcaggaatgg
cagaattccatacagaagaacgctggcttggcttttattgagctgatcaatgaaggaaga
ctcttgtgccacgccatgaaggaccacattgtgcgcgtggccaatgaggccgagtttatc
ctgaaccgccagcgagctgaggatgtccacaagcatgctgaatttgagtcgaactgcgcc
cagtacgctgtggacaggagagaggaagagaagatgtgcgatcatctcatcagcgctgct
aaacaccgcgaccgcgtcaccgccaatcagcttaaacagaagatcgtcaacatcctgact
aacaaacacggagcctggggggcgctgacacacagtcagctgcatgacttttggcgcctt
gactactgggaggatgacctcaggaggaggcggagatttgtcaggaaccctttcggctcc
acccacttggacatctcgtgcaagtctctggaagactatggtcatgaggaagaggacatg
ctgaaggggaggaagacttttcgtggccatacggtggcgaaccagagcccagaggttgag
ctgatgttggagggtgaggacgatgccgttagcctgctgcaggacaaggacatggacaac
ctggctggccctgtgctcatgagcacccccgcccaactggtagcccccatactggtggcc
cgcgggacgctttccatcactacaagcgaaatttatttcgaggtggatgaagaggaccct
ggcttcaaacgcaccgatccgagagtgctggtctactctgaagggctgcatgggaaatgg
atgttcagcgagatccgagccgtgttcgcccggcgctatctcctacagaacacggcactt
gaagtcttcatggccaacagaacttcggtgatgtttaacttccctgatcagcccacagtg
aagaaagtggtctatagtttaccccgtgtaggcgtcggcacaagttacggactcccacag
gccaggcggatttccctggccacgcctcggcagctcttcaagtcctccaacatgacgcag
cgctggcagagacgtgagatctccaacttcgagtaccttatgttcctaaatactatcgca
ggacggacatataacgacctgaaccaatatccggtctttccctgggttctcaccaactac
gagtcggaggagctggacctcacgctgcctggcaacttccgagatctgtctaagccaatc
ggagctctgaacccaaagcgtgcggtgttttatgccgagcgttatgaagcgtgggacgat
gaggctccaccctgccactactccacccactactcatctgcagcctccacccttcactgg
ctcatccgaatagaacccttcacgaccttcttcctcagcagcaatggcaataagttccat
cacccgaaccgtaccttctctggaatcacgcgctcgtggagacactgccagcgcgacacc
tccgatgtcaaggagctgatcccggagttctactacctgccggagatgtttgtgaacagt
aacggctacggtctgggggacagggatgacggcgccccggtgtgtgatgtagagcttcct
gcctgggccaagacgcctgaggactttgtgaggatcaacagaatggctctggaaagcgag
tttgtttcgtgtcagctgcaccagtggattgaccttattttcggctacaagcagcgcggc
cctgaggcggtgcgcgccctcaatgtctttcaccacctgacctacgagggcttcgtcaac
ctcgacagcctcgcctctgacctgctcctgcgtgaggccatggaggcacagatccagagc
attggacagacgccatctcagttgctcatcgagccccatcctcctcgcagctccgccatg
cacctgagtccgctcatgtttaaggagcagatgcagcaagacgtcatcatggtcctgaag
tttccttccaactctccggtcacccacgtggctgccaacacactgccccacctggcaatg
cccgccgttgtcactgtgacctgcagccgtttgttcgctgtcaaccgctggcacaacact
gtgggtctacggggtgctccaggatactcattagagcaggcccatcatctccctattgaa
atggactcagtgatcgccaacaacacaggaacgaacaagaggcagatcaccgatttggtg
gaccaaagcatccagatcaactcgcagtgtttcgtggttacagcagacaatcgctatgtt
ctggtgtgcggcttctgggacaagagttttcgcgtctactcctcagaaactggtaagctg
acacagatagtgttcggccactgggatgtcgtgacgtgtttggcacgttcagagtcttac
atcggcggcgattgctacgtcgtctcaggatccagagacgccactctgctgctgtggtac
tggagcggccgacatcacattataggagacaatccaaataacagtgattacccagcaccc
cgagcagtcctgaccggtcacgactacgaggtggtgtgtgtgtcggtgtgtgccgagctt
ggcctggtcatcagtggagccaaagagggtccgtgcctggtgcacaccatcaccggggac
ctgctccgggctttggagggtcctgatacctgctcacttcctcggctcatatcggtgtcg
agcgaaggccattgtatcatctgctatgagaggggacagttctgtaacttcagcatcaac
ggcaagctgctcgcccagatggagattaacgacaccacacgtgcgatgttgctgagcagt
gatggacagacgctggtgactggaggagataacggagtggtggaggtgtggcaaggctgt
gacttcaaacagctttatatctacccaggctgtgatgctggcattcgagccatggacctg
tctcatgatcaaaggacgttgatcaccggtatggcgtctggcagcattgtagcattcaac
atcgatttcaaccgctggcattatgagcatcaaaatcgctactaa
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integrated database retrieval system
