Clarias gariepinus (North African catfish): 128532938
Help
Entry
128532938 CDS
T10780
Symbol
tpra
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03013
Nucleocytoplasmic transport
Brite
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128532938 (tpra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128532938
NCBI-ProteinID:
XP_053363062
LinkDB
All DBs
Position
11:complement(10371444..10397492)
Genome browser
AA seq
2336 aa
AA seq
DB search
MATALQQVLEKNEISRLTKAAQNKLERFLTGKQTELEALKTSHESFKADCEQQSASTERK
ILELQEQLVSHSKESETLKEENCRLAEELKKLKAADDEEETLQQDKPPKAKYEIEAENRE
FSRLLEKKSREMENLTEDLKRVSEKLEETNTVKMELQMKLDELQSSELSIQHLEKRMEQE
KELLQNQNTWLNSELKSKTDELFTVTKEKGKEILQLRCSLESKTDEVTRLQDEVQTLKKT
SENLQKTTEDFMSKLKEEKDQRIAMEEKYRNELNANTRLCNLYKNAAGDSETKNAELNRG
VEELTKLLKQAQESNKITEKKLSELENSQGKVEAELQEKIKNLEKEVENANKHLADFKRR
GVPALTEEDLTKMSPTAAVVAKIVKPGMKLMELYNAFVEAQDHLQLEKLENRRINKALNE
VKSEVERKTSALKRQREDHENTQKSMNSLNLKLEQSMKEMKKIQEESNEVNKRSSLLEKE
NQRARKQIADLSQQVRVLLVELEEARGTKVVREEVNSAVSSTSEVQGARQVAFRSVEELQ
QQNQNLLIQIRELEEQHEKSTAEAKIARQTEFEQRLEKVQKELELLKEQRNQQKQVADSA
MRQRDMYRVLLQTTGVDLPPQVSEGCSEPSTPSKPVVLPTRPASQAIASEVAQAIQAKVA
FKQLNEAFATYKKEKAENDRLLNEENERLQGQVSDLISQKAKVSSQLEFASKRYEMLQEN
LNSYRREISSQREKIQKLSATSQKYEQIINTMTMDLREANEKLAVAEVRCENLRKERDIS
KQVGNRLHKEKESILAEQRGQNLLLANLKSIQLTMERSEADTRQHYVNQILQLEKEISQL
KKRVEQEVEQRHTVERNQDLQLVEAKKQLAAQNALHQKTKELLKSTEQQVSVLRQQLSNL
ENQNGKQPVKSSSSVETPGVPEQEVKELRARLQQTEDQNSDLQERLKSAQNNLEEYRSMV
LSLEDYISKDKQALEEARLSIENQLKEAQELNRQLEDRMAEAEREKQELHEEKLKAVENV
EKHVKELKHNLTEMQTELQDALQRATSAAAREQQATLESQQQAKLAMEAQNKYERELKLH
AADVEALQAAKKQAQEAAKSIKVLEEKVHIITGKLQEGSTSWEQQEKSLKEELVKRDQRV
GDLEKQNTMLHEQIEQLSVKMGAIAHEQATREGVLNISFNEEEKTQEQILEILRFVRREK
EIAEARFEVAQVETQRYQQHMEHLEKELKEVNDSLTAERDKLQMTTKAMAQQEEKLKRLE
CLNALTETNKILKEEKNRLEQEQQQNRAKLLKLEADMRPLQESNGELSEQNGMLQAEKRL
LEEDVKRWKNRTQQLVNQQKDSSQEESKKLQMEKEAQIKRVQQLTEETAKLKSELARANA
SMSASQNQSQNLRENLGKVTTERENLKKELEAKNQDIQEKIKTITQVKKIGRRYKTQYEE
LKAQHDKMVAESANKPAQLDEAQLEAQQASVQEIQNLRTSLNQAQTRTTELEAQLENLQK
TAGEREAEVRSLQEQLTQIQPELTRLRTELQEKSIQEDQLRQQVAEKEEKTKKAILVAKQ
RLNQLNSAKDKLIKENEEMKQQREELEVRLSALKSQYEGRLSRQERELRELREQQERLGE
QRDEPLELGTSKAQEQQRPSESRQVTLKTTPTTDRGSASTSEPPTANIKPTPVAGAASKP
PNISGSKATPRASIRPMITPAPVTTATPTATVMPTAQTDTQEALQPSETPVEHVTVFGSG
SVRSTSPSVQSTQSITLQQSQATAFVQPTQQQASQEPAAPMVEAVHSSQMERPSTSTAVF
GTVSASAGSSLQKRVREEELESTTEVTESTQDDLNEPPMPKKIRFIQRVRLEEDIDTEES
NDAEVEAPEGTLEAPDASEESYKVLGAEEALSQSVPLDQVSESQESTYEHRHDVIVIETD
SNSDEEGGAEEAGQQYGEEEEDEDEEGAMAEGEESNEGSGDANEPIEAEDTETAEATEPG
TENEESQGASESTQKHADSQSSGEASVSTMEPSPAVEPVREVQPSPSTVGTSSSTLSSQS
HRLPQSPRRPHQTPPPRLNIHPVPELGPPLIQRQSGQTRRPSTSRVPQLTPGVSMQQHFF
DDDDRMVPSTPTLVVPHRNDGFAEAIHSPQVAGVPRFRFGPPEDMIPQTSSSHSDLGQLA
SQGGLGMYESPLFLAAHDEESGGRSVPTTPLQVAAPVSVFAESQPSDVAETASQSVPMVS
TSTAAMTGPGEAVPGDDADDVFMAEAESEGTSGEASLESQSELEPAQPSDDASLPSTSQE
PTSSSAPDTSSSQQPRLADRARRECVQPPRRAQLIRRGIGYPRGRGRGFSRGTPPF
NT seq
7011 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcattgcagcaagtgctggagaagaatgagatcagcagactgaccaaagct
gctcagaacaaactcgagagatttctcacgggcaaacagacggagctggaggcgctgaag
accagccatgagagctttaaagcggactgcgagcaacagtcagccagcactgagaggaaa
attctggagctgcaggaacagctcgtgtcccacagtaaagaaagtgagactctcaaagaa
gagaactgccgactcgctgaagaactcaagaaactaaaagcagctgatgatgaagaggaa
acattgcagcaggataaacctccaaaagctaaatatgagattgaggcagaaaacagagag
ttctcccgcttgctcgagaagaaatcgagagagatggaaaatctcacagaggatcttaag
cgtgtcagtgagaaactggaggaaaccaacacagtgaagatggagcttcagatgaaactg
gatgagcttcagtcatcggaactctctattcagcacctggagaagcgaatggagcaagaa
aaggagcttcttcagaaccagaatacatggctgaactccgagttaaaaagcaaaacggat
gagcttttcacagtgactaaagagaagggtaaagagatcctccaacttagatgctcttta
gagagcaagactgatgaggtaaccaggcttcaggatgaagtccagacactcaagaaaaca
agtgaaaacttgcagaagaccacggaggatttcatgagcaaactaaaggaggaaaaagat
cagcgtattgccatggaggaaaaatatcgcaatgagctgaatgccaacacaagactctgc
aacttatacaagaacgcagcgggcgactctgaaactaagaacgcagaactcaacagaggt
gtggaggagcttaccaaactgcttaagcaggcacaggaatctaacaaaattactgagaag
aaactatccgagttggagaactcccagggtaaagtcgaggctgagctgcaggagaagatc
aaaaatttggagaaagaggtggagaacgccaacaaacaccttgcagacttcaagcggaga
ggagttccagctctcactgaagaggatctgaccaaaatgtctccaactgcagctgtagtg
gccaagattgtgaaacctggcatgaagcttatggagctgtataatgcgttcgtggaggct
caggaccacctgcaactggagaagttggagaaccgacgtattaacaaggcactaaatgag
gtcaaatcagaggtggagcgcaagacgtctgcattaaagaggcaacgggaggaccacgag
aacacacagaagtccatgaacagcctcaacctaaaactagagcaaagcatgaaggagatg
aaaaaaatacaggaagaatccaatgaggtaaataagcgatcctcattgctggagaaagag
aatcagagggcaaggaaacagatagcagacttgtctcagcaggtgcgtgtgttgctggtg
gagctggaagaggcacgaggcactaaagtggtgcgggaggaggtaaactctgccgtgagc
agcacctctgaggttcaaggtgcacgccaggtggccttccgcagtgtggaggagctccag
caacaaaaccagaatctcctgatccaaatacgtgagctagaggagcaacatgagaagagc
acagctgaggccaagattgcgaggcaaacagagtttgagcaaagactagagaaggtacag
aaggagttggagctcttgaaggagcaaagaaaccagcagaagcaggtggctgactcggcc
atgaggcagagagacatgtaccgtgtcctgttacagacaactggagtcgaccttcctcca
caggtctcagaagggtgttctgagccatctaccccaagcaaacctgtcgtcctgcccact
cgacctgcgagccaggctatagcttcagaagtggctcaggccatacaggctaaagtggct
ttcaaacagctgaacgaagcctttgcgacctataagaaggaaaaggcggagaatgacagg
cttctaaatgaggagaatgaacgactacagggtcaggtgtctgacctcatctcccagaag
gctaaagtctcctctcagcttgaatttgcctctaagaggtatgagatgctacaggaaaat
ctcaacagctacaggagagagatcagctcccagcgggagaagattcaaaagctctctgcc
acatctcagaaatatgagcagatcatcaacaccatgacgatggatctgcgggaagccaat
gagaaactagcagtagctgaggtgcgatgtgaaaacctgcgtaaggagcgtgacatttcg
aagcaggtggggaacagacttcacaaggagaaggagtccattctggctgagcagcgtgga
cagaacctgctgctcgccaacctaaagtccatccagctaacgatggagcgctcagaggcc
gacacaaggcagcactatgttaatcagattttgcagctagagaaggagatttctcagctg
aagaagagagttgaacaggaggtagaacagaggcacactgtggaacgaaaccaagatctt
cagctagtggaggctaagaagcagttggcagctcagaacgctttgcatcaaaagaccaag
gagctgctaaagagcactgaacagcaggtttctgtcttaagacagcagctgagcaacttg
gaaaaccagaatggcaaacagcctgtcaaatcatcatccagtgttgaaactcctggtgtt
cctgagcaggaggtgaaggagttgcgtgcacgtctgcagcaaactgaggaccagaattca
gatctgcaagagcgcctgaagagcgcacagaacaacctggaagaatatagaagcatggtg
ctgagtctggaagattacatcagcaaggacaaacaagcacttgaggaggcacgattatcc
atagagaaccaactgaaagaggcccaggagcttaacaggcagctggaggatcggatggct
gaggcagaaagggagaagcaagagctacacgaggagaagctcaaagctgtggagaatgta
gagaaacatgtaaaagagttgaaacataacctgacggaaatgcagacagaactgcaggat
gcactacagagagcaacatctgctgcagccagggagcagcaagccacactggaaagccag
cagcaggctaagctggccatggaggcacagaataagtatgaacgggagctaaagcttcat
gcggctgatgtggaggccctacaggctgctaagaaacaggcccaagaggcagcgaagagc
atcaaagtgttggaggagaaggtccatataattactggcaagctccaggagggcagtaca
agttgggaacagcaagaaaaaagtctcaaggaggagctggtgaaacgggatcagcgtgtt
ggagacttagagaaacaaaacacaatgctccatgaacagattgaacagttaagtgtgaaa
atgggtgccattgctcacgaacaggcgaccagagaaggcgtcctaaacatttcttttaat
gaggaggaaaaaactcaagagcagattctcgagatcctcaggtttgtgcgtcgtgagaaa
gagatagctgaggcccggtttgaggtcgctcaggtagaaacacaacgctaccaacagcac
atggagcacctagagaaagagctgaaggaggtcaatgacagcctgacagctgagcgagac
aaattacagatgactacaaaggccatggctcagcaggaggagaaactgaaaaggctagaa
tgtttgaacgctctaaccgagaccaacaagatccttaaggaggagaagaaccggttggag
caggagcaacagcagaatcgggctaagttgcttaagctggaggcagacatgaggcctctg
caggagagcaatggggagctcagtgaacagaatggcatgctgcaggctgagaagcgactc
ctagaggaggatgttaaacgctggaagaatcgcactcagcaactcgtgaatcaacagaaa
gacagcagtcaggaggaaagtaagaagctccaaatggagaaggaagcccaaatcaaacgc
gtccagcagctcacagaggaaactgctaaactgaagagtgagctggccagggcaaacgca
tccatgtctgcatcacaaaatcagagtcagaacctgcgagaaaatctggggaaagtcacc
acggaaagagaaaatctaaagaaggagttggaagctaagaatcaagacatccaggagaag
atcaaaaccatcacacaagtcaagaagattgggcgccgctacaaaactcagtacgaggag
cttaaggcgcagcacgacaagatggttgcagaatcagctaataaacctgcacaattggat
gaagcacagctggaggcacagcaggcctcagtgcaggagatccagaacctgagaacatct
ctgaaccaggcccagactagaaccacagagttggaggcacagttggaaaacttgcaaaag
actgcaggagagcgtgaggctgaggtgaggagtctgcaggagcaactcactcagattcaa
ccagagctgacgcgtctccgtacggagcttcaggagaagagcattcaggaggaccagcta
agacagcaggttgcagagaaagaggagaagaccaagaaagccatcttggtagcaaagcag
agactcaaccagcttaacagtgcaaaagacaagctaatcaaagagaatgaggagatgaag
cagcagagagaagagttggaagtgaggttgagtgcattgaagtctcagtatgaagggcga
ttaagccgtcaagaacgggagctgagagagctgcgtgagcaacaggaaagacttggagaa
caacgagatgagcctctggagctggggacaagcaaggctcaggagcagcagaggccatcg
gaaagcagacaggtcacactgaagaccacacccactaccgacagagggagtgctagtacc
agtgagccacctacagcgaacattaagcccactcctgtagctggagcagccagcaagccg
cctaacatttcaggcagcaaggccacaccaagagcaagcatcagaccaatgataacacct
gctcctgttaccacagcaactcctaccgccacggtcatgcccacagcgcagacagataca
caggaagctctgcagccgtccgagactccggtggaacatgtgaccgtgtttggtagtggt
tctgtgcgttccacaagtccaagcgttcagagcactcagtcaatcacactgcagcagagc
caagccacagcctttgttcagcccacccaacagcaggcaagtcaggagccagcagcgccc
atggtggaggcagtgcacagctcacagatggagagaccatccacctctactgctgtgttt
ggtacagtgtctgcgagtgcaggttcatctctgcagaagcgtgtacgagaggaggagctg
gaaagcacaactgaagtgaccgagagcacacaggatgaccttaatgagccacctatgcct
aagaagattcgttttatccagagagtccgcctggaggaggatatcgatacagaggagagt
aatgatgcagaagttgaagcacctgaaggtactttggaagccccagacgctagtgaggag
agctacaaagtgttaggtgcagaagaggccctgtctcagtctgttcccttggatcaagtg
agtgagtctcaagaatcgacctacgagcacaggcacgatgtcattgtcatagagacagac
agcaacagtgacgaagagggaggggcagaggaggctggacagcagtatggagaggaggag
gaagatgaagatgaggagggtgcgatggcagagggagaagagagcaacgagggcagtgga
gacgccaatgagccaattgaggccgaggacactgagactgctgaggccaccgagccaggc
actgagaatgaggagagtcagggagcatcagagtctacccagaagcatgccgactctcag
agcagtggtgaagcaagcgtcagcaccatggagccttctcctgcagttgagcctgttcgg
gaggtgcagccttcccccagcacagttggtacctccagcagcaccttgtcttcccagagc
caccgactgccccagtcaccccgcagaccacatcagacacctccacctcgactcaacatc
catccagtccctgagcttgggcccccactcatacagaggcagtcaggtcagactcgacgc
ccatcaacgagccgtgtaccccagctcacacctggggtaagcatgcagcaacacttcttt
gatgatgatgatcgtatggttcccagcactccaactttagtggttcctcaccgtaatgat
ggctttgctgaggctatacattctcctcaggttgctggagtccctcggttccgtttcgga
ccaccagaggacatgattcctcagacaagctcgtctcactctgatcttggtcagctggca
tctcagggtggtctgggcatgtatgagagtccactatttctggctgctcatgatgaagag
tctggaggcagaagtgttcccaccacccctctgcaggttgcagctccagtgagcgttttt
gctgagagtcagccttctgatgtggcggagacagcttcacagtctgtccctatggtcagc
acatccaccgcagccatgactggaccaggagaagctgttcctggagacgatgctgatgac
gtctttatggcagaagcagaaagtgaagggacgagcggtgaggcatcgttggagagccag
tctgaactggagcctgcgcagccttctgatgatgcaagcctgccttccaccagccaggag
ccaacctccagctctgctccagataccagcagcagccagcagcccagacttgcagacaga
gcccgcagagaatgtgtccagcccccacgcagagctcagcttatcaggagaggtattggt
tatcctcggggccgtggccgagggttcagtagaggcacgcccccattctga
DBGET
integrated database retrieval system
