Clarias gariepinus (North African catfish): 128532964
Help
Entry
128532964 CDS
T10780
Symbol
med13b
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgar03021
]
128532964 (med13b)
Transcription machinery [BR:
cgar03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
128532964 (med13b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Motif
Other DBs
NCBI-GeneID:
128532964
NCBI-ProteinID:
XP_053363096
LinkDB
All DBs
Position
11:21862622..21888309
Genome browser
AA seq
2095 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFCLADLTGIKWKCFVWQGPTSSPIVFPVTEEDPILCSFSRC
LKADVLSVWRRHQTPGRRELWLFWWGDDPNFAELIHHELSSNEDGVWESGLTYECRTLLF
KAIHNLLERCLMNRCFVRIGKWFVKPYEKDEKPINKSEHLSCSFTFFLHGDNNVCTSVEI
NQHQPVYLLSEEHLTQAQHSSSPVQVILSPYGLNGTLTGQSFKLSDPPTQKLIEEWKQFY
PIGPNTKETPEDKLDDLDWEDDSLAAVEVLVAGVRMVYPACLVLVAQSDIPTPAAASSSG
TMITPGGHHSHTIQRESALSSITLTPPTSPEEAQKVCQPAPRWTKISSAADGFSMDSTSH
HGGKVPRKLASHLLEAVWQECNVNRAQKRKFAAIASGLCEEEADKAGVWDFVERYQRMQC
NCPRHKNQKQRTSNTPGLPLPSGQTSQLPSKYKVAEKPEKPEKQQKRPQTPFHHRSSVGE
DLTLEPDERGSHYRALHHGDVDSSKTQTLHTTSRDMVGSPQPPPLSPHLCEREEETPAEL
KRSSTPLQQFYPPSSDTCLLPSKSPDRASFEPVASDYTPAYPESMEPTVYVGSAISPNED
TSHNPWRYFKLPGKRNMDLQPPQLPVDKLKQDNLDSAVSVTEMMASSATLKVAEDRVKMY
IQKKNQYLLVSVCDGEQELDADPYAFVEGDEEFSFTDKEKRPGAEPAKRNKRDDGSTSST
DDAHGSACSKPLPSTSLIHETDLAVSINDLDNLFNSDEDELTQPGARKTGSGAEEKFGGK
EPKPAAADTLSCLSAADLHQMFPTPPSLEQHIMGYSPMNVGSKECGSVETGPGFTLVDGP
LLSGPFKVEVEESLCSPKPSEIKDFSFVFKPEPSQVFVGNSLYAPLKTLPSQCLISLKLP
EECVYRPSWTVGKLEMLQPVPAMSFLGKDSNIPSVGSAMELQDYTQTYTPQTHTPFQSNS
APPSNSGAGILPSPATPRFSAPTPRTPRTPRTPRGPASAQGSMKYDNSDLYSPASTPSTL
RPLSSVEPATAPSVPEAHSLYVTLILSDSTMNLFKDCNFDSCCVCVCNMNIKGADAGVYI
SDAGLDSQYSSTETCSCGFSAVVNRRYANGAGLFLEDELDVVGRGTDAGREAEKHLEAQR
RASSVHLQDELLLLLQEQCSNPFPALCMPEPRVGLVPRPPRRLEERDYCSDCYLALEHGR
QFMDNMSGGKVDETLVKNSCLHPWANRNAMDVSLLFSQDVLRMLLSLQPVLQDAIQKKRS
VRSWGVQGPLTWQQFHKMAGRGSYGTDESPEPLPIPTFLVGYEYDFVVLSPFVLPYWEKL
LLDPFGSQRDVAYVVVCPDNETLLSGAKTFFRDLTAVYEACRLGQHKPICKAHADGIVTV
STAGLRPQAEQPLSDWFFKMCNSINSDFVTKLKLYAQVCRHDLAPYLAAQSLDSSLLSQR
NPSSTLSSSISSQPANSSSTSTGPQNTSTATSTSTASSNSSTPAPTSTTSSNSQGLGGLG
SNKASSLPPFGAQGIQHAGTQSTGTIGDNTSATSQPQAHPEPPESTMERDKVGVPTDGDS
HAVSYPPAIVVYIVDPFSYEETNRGCNSSVWSLGLLYCYMEMLQFLPPHIRNAVSVQVVP
CQYLLQPVRSEERHMYSQHLKSLAFSVYTQCRRPLPNSTNVKTLTGFGPGLAIDTALQSS
KRAEFVRLYTPPFVLAPVKDKQTELGETFGEAAQKHNVLFVAYCLSHDQRWLLASCTDQY
GELLETCIISIDVPNRARRKKGSARRLGLQKLWEWCVSLVQVTSLPWRVVIGRLGRMGHG
ELQDWSILLSRRNLQSLSRRLKELCRMCGISSADSPSILSACLVALEPQATFVIMPDSVS
TGSVFGRSTALNMQTSQLNTPQDTSCTHILVFPTSAVVQVIDTPFNPIHDASDAMGGMDG
ILDLLVSENDVDPDLINILPNSPTTSPVHSPGSHYPHGGDGSKGQSTDRMESHDETPNIL
QQPMALGYFVSTAKAGPLPDWFWSSCPQAKNQCPLFLKASLHLHVSSVQSDELLHSKHSH
PLDSNHTSDVLRFVLEQYNALSWLTCDPATQDRRSCLPVHFVVLNQMYNFIMNVL
NT seq
6288 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttgttttgtacccaacggggcgagcctggaggactgccactccaacctattt
tgtctggctgacctcacaggcataaaatggaaatgctttgtatggcaaggccccacatct
tcacccatcgtcttccccgtgactgaggaggaccccatcctgtgcagcttcagccggtgc
ctaaaggcagacgtgttgagcgtgtggcggcggcaccagacccctggacgccgtgagctc
tggctcttttggtggggagatgatcccaacttcgccgagctcatccaccacgagctttca
agtaacgaagacggcgtgtgggaaagcggtttgacgtacgagtgccgcacgctgctcttc
aaagccatccataacctgctggagcgctgcctcatgaaccgctgctttgtacgcattggc
aagtggtttgttaaaccctatgagaaagatgagaagccaatcaacaagagtgagcatctg
tcctgttccttcaccttcttcttgcatggagataacaatgtgtgtaccagcgtggagatc
aaccagcatcagcctgtctacctgctgagtgaggaacacctgactcaggcccagcacagc
agcagcccagtgcaagtgattcttagtccatatggtctgaacggtacactcactggccag
tcctttaagctttctgatccgccgacacagaagttaatagaagaatggaagcaattctac
ccaattggccccaacacaaaggagaccccagaagacaagttagatgatttggactgggaa
gatgactctctggctgctgtggaggttcttgttgctggagtgaggatggtgtacccagca
tgcttggtgcttgtagcacagtcagatattccgaccccagctgcagcaagctcctctggc
actatgattacccctggaggacatcatagtcacaccatacagagagaatctgccctctcc
tcaattacactcactcctccaacttcaccagaggaagctcaaaaagtttgtcagcctgct
ccaagatggacaaaaatttcgtcagcagctgatggcttcagcatggatagtacgagtcat
catgggggtaaagttcctcgtaagctggccagtcatttgctggaggcagtgtggcaggaa
tgcaatgtcaaccgtgctcagaagaggaagttcgcagctatagccagcggtttgtgtgaa
gaagaggctgacaaagctggtgtttgggattttgttgaacgctatcaaaggatgcagtgc
aattgcccaaggcacaaaaaccagaagcaacgtacaagtaacactcctggacttcccctc
ccttctggccaaacctctcaactcccctccaaatataaagtggcagaaaaaccagagaaa
ccagagaaacagcagaagaggcctcaaacaccattccatcaccgtagctctgtgggtgag
gatttgaccctagagccagatgagagaggcagccattatcgtgcacttcaccacggggat
gttgattcgagcaaaacgcaaaccctgcacacgacatccagggacatggttggctcgcct
cagcctccaccgctcagcccacatctctgtgagcgagaggaagagacaccagcagagctg
aaacgctcttccacccctcttcaacagttctaccctccctcttccgatacctgccttttg
ccttcaaaaagccccgatcgtgcttcctttgaacctgtagcctccgactatactccagct
tacccagaatctatggaacccacagtgtatgttggctcggccattagccccaatgaggac
acaagccacaacccctggaggtactttaaacttcctggcaaaagaaacatggacctacag
cctcctcagcttcctgtggacaaactgaagcaggacaacctggatagtgctgtttctgtt
acagagatgatggcttcctctgcaactctgaaggtggctgaagatagggtgaagatgtac
attcaaaagaagaaccagtatctgttagtatctgtgtgtgatggagaacaggagctggat
gcagatccctatgcttttgtggagggagacgaggaattctcttttacggataaagagaag
aggccgggagcagaacctgcgaagagaaacaaaagggatgatggtagtacatcttcgact
gatgacgctcacggctcagcctgcagtaaacctcttccatccaccagcctaatacatgag
accgacctggctgtgtcaataaacgatctggataatctcttcaactctgatgaagatgag
cttacgcagcctggagccaggaaaactggtagtggagctgaggagaaatttggtggcaaa
gagcccaaaccagcagcggcagacactctgtcatgtttaagtgctgcagatttacaccag
atgtttcccacgcctccgtctcttgagcaacacatcatgggatactccccaatgaacgtg
ggtagcaaggagtgtggttctgtggaaactggtccaggtttcactctggtagatgggccg
ttgctcagtggtccttttaaggtggaggttgaggaaagcctctgtagccccaagccttcg
gaaatcaaggatttctcttttgtgtttaagccagagcctagtcaggtttttgtgggcaac
tctctgtatgctcctctaaagacacttcctagtcaatgcctaatctccctcaagctgccg
gaagagtgtgtgtaccggcccagctggactgtaggcaagctggaaatgctgcagccagtg
cctgccatgtctttcctcggcaaggacagtaacatccctagtgtgggcagtgccatggag
ctgcaggactacacacaaacgtacaccccacagacccacacccccttccagtccaacagt
gcccctcctagcaacagcggtgcaggtatcctgccatcacctgccacccctcgcttttca
gcacccacaccaaggacaccacgtaccccccgcaccccacgtggtcctgctagtgcccag
ggttcgatgaaatacgacaactctgacctgtattctcctgcctccaccccctccaccctc
aggcctctcagctcggtggaaccggctacagcgccttcggtgcctgaggcccacagcctc
tatgtcactctcatcctttccgactcaaccatgaacttgtttaaagactgtaattttgac
agttgctgtgtgtgtgtttgcaacatgaacatcaagggtgctgacgcaggtgtttacatt
agtgatgcaggcctggattcacaatattccagtacagaaacctgctcctgtggctttagt
gccgtcgtcaatcgccgctatgcaaacggtgctggcctctttcttgaggatgagctagat
gttgtgggcaggggcacagatgctggccgagaagcagaaaagcacctggaagcacaacgt
cgtgcttcctctgtgcacctccaagacgagctgctccttctgctgcaggagcagtgctcc
aatccttttcctgctctgtgcatgccagaacccagggttggcttagtaccacggccgcct
cggcgtctggaggagagggactactgtagcgactgctacctggctctagagcatggccgt
caatttatggacaacatgtctggagggaaagtagatgaaacgcttgtaaagaactcgtgt
ttgcacccctgggccaatcgcaacgctatggatgtaagcctactgttctctcaggatgtg
ctaaggatgttactgtctctgcagcctgtgctgcaggacgccatccaaaagaagcgatcc
gttcgctcctggggcgtccagggtccacttacttggcagcagttccacaaaatggctggc
aggggatcctatggtactgacgaatctcctgagccattacccattccgactttcctagtt
ggttatgagtatgactttgtggttctgtcaccttttgtcttgccctactgggagaagctg
ttgctggaccccttcggttctcagagagatgttgcctatgtggtggtgtgtcctgacaac
gagactctgctgtctggtgctaaaactttctttagggacttgactgccgtctatgaggca
tgtcggcttggtcagcacaagcccatctgcaaggcccatgctgatgggatagtaacagtg
agtactgctggcttaaggcctcaggcagagcaaccacttagtgactggttcttcaaaatg
tgcaacagcatcaacagtgacttcgtaacaaaacttaagctctacgcacaagtgtgccgg
catgacttggccccatacctggcagcccagtctttagacagctccttgctctctcagcgg
aatccttcatccaccttatcctcctcaatatcttcacaacctgccaactccagcagcacc
tccacaggcccacagaacacctccactgccaccagcacctccacagccagcagtaacagt
agcaccccagcacccacctctaccacctcctctaactctcagggtttgggaggcttagga
tctaataaggccagttctcttcctccctttggagctcaaggaattcagcatgctggaacc
cagagcacgggcaccataggcgacaacacatcagccacaagccagccacaggcccatcct
gagccccccgagagcactatggagagggacaaagtgggtgtaccaacagatggagactcc
catgctgtcagctatccccctgccatagtggtttacatagtggacccttttagctatgag
gagacaaacagaggctgcaactctagtgtgtggagtctgggacttctctactgctatatg
gaaatgctgcagtttttgcctccacatataaggaatgccgtgtctgtgcaggtggttccc
tgccagtatctgctgcagccggtacgaagtgaagagaggcatatgtattcccagcatttg
aagtccctggctttttctgtgtacacacaatgcaggaggcctctaccaaactccactaat
gtcaaaacactaacaggttttggccctggacttgccatagacactgcattacagagctct
aagagggcagagtttgtgcgtctctacacccccccatttgtactggccccagtgaaggac
aagcagacggagctgggtgagacctttggtgaagctgcacaaaaacacaacgtcctcttt
gtagcctactgtttgtctcatgatcaacgctggctgctggccagctgcaccgaccagtac
ggagagctgctggagacttgcatcatcagcatagatgtgcccaacagagctcggaggaaa
aaaggttcagctcgtcgacttggccttcagaagctctgggagtggtgtgtgagcctggtg
caggtgacctcgctgccttggcgagttgtgatcggtcgccttggtagaatgggtcatggg
gagttgcaagattggagcatcttgctaagtcggcgtaacctgcaatctctgagccgtcgc
ttgaaggagctatgcaggatgtgtggcatctcatcagcagacagtcccagcatccttagt
gcctgcttagttgccctagagccacaggcaacatttgtcattatgccagactctgtatct
actggttccgtgtttggccgcagcactgctctgaacatgcagacatcacagctgaacacc
cctcaggacacgtcttgcacccacatattggtgttccccacttctgctgtggtccaggtc
atcgacacacccttcaatccaattcatgatgcatcagatgccatgggcggtatggatgga
atcctggacctgcttgtttcagagaatgacgtggaccctgatctcattaatatattaccc
aattctcccaccacctccccagtgcactcacctggctcacactacccccacggaggagac
ggcagcaagggccagagcacggaccgcatggagtctcacgatgaaactcccaacatcctg
cagcagccaatggcactgggttattttgtatctacagccaaagcagggccgttgcctgac
tggttttggtcctcctgccctcaggccaagaaccaatgcccactgtttttaaaggcatcc
ttgcacctgcacgtgtcctcggtgcagtccgacgagctgctgcacagtaaacactcccac
cctcttgattccaaccacacctcagatgtgctcaggtttgtgctggagcagtataatgcc
ctctcctggctgacctgtgaccctgccacgcaggaccgccgctcttgtctccctgtgcac
tttgttgtgcttaaccagatgtacaacttcatcatgaacgtgctgtaa
DBGET
integrated database retrieval system
