KEGG   Clarias gariepinus (North African catfish): 128532966
Entry
128532966         CDS       T10780                                 
Symbol
cul5a
Name
(RefSeq) cullin-5a
  KO
K10612  cullin 5
Organism
cgar  Clarias gariepinus (North African catfish)
Pathway
cgar04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    128532966 (cul5a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cgar04121]
    128532966 (cul5a)
   03400 DNA repair and recombination proteins [BR:cgar03400]
    128532966 (cul5a)
Ubiquitin system [BR:cgar04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul5 complex
    Cullin
     128532966 (cul5a)
DNA repair and recombination proteins [BR:cgar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     128532966 (cul5a)
SSDB
Motif
Pfam: Cullin Cullin_AB Cullin_Nedd8
Other DBs
NCBI-GeneID: 128532966
NCBI-ProteinID: XP_053363100
LinkDB
Position
11:complement(21278787..21293728)
AA seq 780 aa
MAMSNLLKNKGSLQFEDKWDLMRPIVLKLLRQESVTKQQWFDLFSDVHAVCLWDDKGPAK
IHQALKEDILDFIKQAQARVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEITLMG
KQGSNKKSNVEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGV
RESYVNLCSNPDDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLRE
EEKRALRYLETRRECNSVQALMECCVNALVTSFKETILAECPGMIKRNETDKLHLMFSLM
DKVPSGIEPMLKDLEEHIISAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQ
DDPRFLTARDKAYKAVVNDATIFKLELPMKQKGVGLKTQPESKCPELLANYCDMLLRKTP
LSKKLTSEEIELKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWL
REVGMPADYVNKLARMFQDIKVSEDLNQVFKEMHKHNKLALPADSVNIKILNAGAWSRSS
EKVFVSLPTELEDLIPEVEDFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQL
AVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLSYEPQVSSPKDF
TDSTLFFVNQEFSLIKNSKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAII
QIMKMRKKITNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIKRDESDINTFIYMA
NT seq 2343 nt   +upstreamnt  +downstreamnt
atggcgatgtctaatctattaaagaacaaaggctccctccagtttgaggataagtgggat
ctgatgcgcccaattgtcctgaagttacttcgccaggagtctgtaacgaagcagcagtgg
tttgatcttttctcagatgttcatgcggtttgtctatgggatgacaaaggcccagcaaag
attcaccaggctcttaaggaggacattttagatttcataaagcaagcccaggcgagggtg
ctcagtcaccaagatgacacggccctcctcaaggcctacattgtggagtggaggaagttc
tttactcagtgtgatatactacctaagccattttgccagcttgagatcactctgatgggg
aagcaaggcagcaacaagaagtccaacgtggaggacagcatagtgcggaagctgatgttg
gacacttggaatgaatccattttttccaacattaaaaacaggctgcaggatagtgcaatg
aagcttgtccatgctgaaagacttggagaggcttttgactctcagcttgtcatcggggta
cgcgagtcttatgtcaacttgtgttccaaccctgacgataagctacagatctacagggat
aactttgagaaggcctacctggactccacagagaggttctacaggacacaggctccttct
tacctgcagcaaaatggagtccaaaactacatgaaatatgcagacgctaaattaagggag
gaggaaaaacgtgcactacgttatttagagacacgacgtgaatgtaactctgttcaagca
cttatggaatgttgtgtaaatgcactggtgacatcattcaaagaaacaatcttggcagaa
tgtccaggcatgattaaacgcaatgagacagacaagcttcatctgatgttctcactgatg
gataaagtgccaagtggaattgaacccatgcttaaagatttggaagaacacatcatcagt
gctggcctggccgacatggttgctgctgccgagacgatcacaacggactctgagaagtat
gtggaacagcttctcactttgttcaaccgttttagtaaacttgtgaaggaagctttccaa
gatgatccccgatttctcacggccagagataaagcatataaagcagttgtgaatgatgct
acaatatttaagttggaactacctatgaaacagaagggagtgggcctcaaaacacaaccc
gagtccaagtgtccagagctgctagccaactactgtgacatgctgctgaggaagacacca
ctcagcaagaagctcacctcagaggagatcgaactgaagttaaaggaagtgttactggtg
ctaaaatatgtccagaataaggatgtgtttatgaggtaccataaagcccacctaaccagg
aggctgatcctggacatctcagctgacagtgaaattgaggagaacatggttgaatggctc
agggaagttggtatgccagccgattatgtcaataagctagctagaatgttccaagacata
aaggtctcagaagatctaaaccaggtctttaaggagatgcataaacacaacaagcttgct
ttaccagctgactccgtaaatataaagatcctgaatgctggagcatggtcacgcagctcg
gagaaggtctttgtttcacttcctactgagctggaggacctcattcctgaagttgaagac
ttttacaagaagaatcacagtggcagaaagctgcactggcaccaccttatgtccaacggc
attattacatttaaaaatgaagtgggtcagtatgacttggaggtcacaaccttccagctg
gctgttcttttcgcctggaaccaaagacccagagagaagatcagctttgagaacttgaag
cttgccactgagctgcctgatgcagagctgagacgcacactctggtctcttgttgccttc
ccaaaacttaaacggcaggtcctttcatatgaacctcaagtgagctctcccaaagacttc
acagatagtaccttgttcttcgttaaccaggaattctccttgataaaaaactccaaagtg
cagaagagggggaagattaacctgattggtcgtcttcagctgactacagagcgaatgagg
gaagaggagaatgaaggcatagttcaattaagaatattaagaacacaggaggccattatt
caaataatgaagatgcgaaagaagatcacaaatgcccagctgcagaccgagctggtggag
atcctgaaaaacatgttccttccccaaaagaagatgatcaaggagcagattgaatggcta
atcgagcacaagtacatcaagcgtgatgagtcagacattaacacatttatctacatggca
tag

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