Clarias gariepinus (North African catfish): 128533034
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Entry
128533034 CDS
T10780
Symbol
tubd1
Name
(RefSeq) tubulin delta chain
KO
K10390
tubulin delta
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
128533034 (tubd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgar03036
]
128533034 (tubd1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgar04812
]
128533034 (tubd1)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
128533034 (tubd1)
Cytoskeleton proteins [BR:
cgar04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
128533034 (tubd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
128533034
NCBI-ProteinID:
XP_053363201
LinkDB
All DBs
Position
11:complement(21484445..21491088)
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AA seq
442 aa
AA seq
DB search
MSVVTVQLGQCGNQIGPELFSAVYEDSSGANAKTYKQCSDERFFSENPDGALVARAVLID
MEPKVISQAITKASSSGKWRYAEKSHFCQKQGSGNNWANGFCVHGPQHKDAVEDLVRREV
ERCDRLAGIFAMMSVAGGTGSGVGTYVTQCLRERYPHSFILNHLTWPYGTGEVIVQNYNS
VLTLSRLYTLSDALVVHENDTVHKICSQLMNIKHISISDLNKVIAHQLGSVLQPAYTADS
PAHYSRNPIGELLSSLVCHPEYKLLNVLNIPHMSQTSLAYSAFTWPGLLKHLRQMLIANA
RMEEGIDWKVCVPSNSAESMRNSQTGFNRSLSNLLILRGKDVSSADIEPFKEPGMYVPWI
PTNGNFSTWHSPVPFSGYEKLATLISNSQSLLNPLDNIVKKAWNMFASRAYIHQYTKFGI
SEEDFLESFTILEQIVSSYTHL
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttgtgacagtgcagctgggccagtgtgggaatcagattggacccgagttgttc
agcgctgtgtatgaagactcctctggagcaaatgcaaaaacatacaagcagtgcagtgat
gagagattcttcagcgagaatccagacggagcgctggtggcacgtgcagttcttattgac
atggagcccaaagtaatttctcaagccataacaaaggcatcaagctcaggaaaatggaga
tacgcagaaaaatcccacttctgccagaaacaaggctctggaaacaactgggcaaatggt
ttctgcgttcacggccctcagcacaaggatgcagtggaagatctggtgcggcgggaggtg
gaacgttgcgatcgccttgcaggaatatttgccatgatgagcgtggcagggggtacgggt
tctggagtgggcacctatgtcacccagtgtcttcgagagcgttatccacattcatttatt
cttaatcacctgacatggccctatggaacgggagaggttattgtgcaaaactacaattct
gttctcactctgtctcgtctctacacgttgtccgatgcacttgtggtgcacgagaacgat
acggttcacaaaatctgtagccagctgatgaacatcaagcacatctctatctctgacctt
aacaaggtgatcgctcatcaactgggcagcgtgctgcagccagcatacaccgcagactca
cctgctcactacagcagaaaccccataggggaattgctgagctccctggtgtgtcatcct
gagtacaaactgctcaacgtgttgaacattcctcacatgtctcagacgtctctggcttac
agtgccttcacctggcctggactgctcaaacatttaagacaaatgcttattgccaatgcc
agaatggaggaaggtatcgattggaaagtgtgtgtgccgtcgaatagtgcggagagcatg
aggaactcacaaacaggttttaacagatcactctcaaatcttctgatactgcggggtaaa
gatgtttcgtctgccgatatagagccttttaaggagcccgggatgtacgtgccgtggatt
ccaacaaatggcaacttttctacatggcactcccctgtgcccttcagtggctatgagaag
ttggccactttaatcagcaatagccagtcacttttaaatcctctggataatattgttaaa
aaggcctggaacatgtttgcctcaagggcgtatattcaccaatacaccaaatttggaatt
tcagaagaagattttcttgaaagctttaccattttggaacagattgtctccagctacacc
cacctctga
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