Clarias gariepinus (North African catfish): 128533133
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Entry
128533133 CDS
T10780
Name
(RefSeq) cell adhesion molecule DSCAML1 isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgar04515
]
128533133
Cell adhesion molecules [BR:
cgar04515
]
Immunoglobulin superfamily
Other
128533133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
C1-set
Ig_5
Pur_ac_phosph_N
V-set_CD47
Ig_6
Interfer-bind
Sp38
fn3_2
Receptor_2B4
ChitinaseA_N
DUF1461
Motif
Other DBs
NCBI-GeneID:
128533133
NCBI-ProteinID:
XP_053363333
LinkDB
All DBs
Position
11:complement(27692570..27792129)
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AA seq
1940 aa
AA seq
DB search
MRGNVAVFKCLIPSAVQEYVSVVSWEKDTVAIVPGNRFFLTSYGALYISDVQKEDALSTY
RCITKHKYSGETRQSNGARLSVMDPTESTPSVMDSFQSGEVQVGRSVELPCIASGFPNPT
IRWLKDGRPLPADSRWTRRLTGLTISDLRMEDSGNYICEVTNSFGSKEVTGYLNVIEPLR
VTVSPKNLKTGISSTVILSCAVQGSPHFTVSWFRNTEPVLPDQHFSIQGTNNETLFITAA
QKRHSGAYQCFATRKGQTAQDFSIILLEDGTPRIVSSFSERVVAPGEPFSLMCAAKGAPP
PTITWTLDDEPIARDSAHRASQYTLSDGSTVSHVNVSNPQIRDGGVYRCAARNSAGSAEY
QARINVRGPPSIRAMRNITAVAGRNTFINCRVIGYPYYSIKWYKDGMLLPDNHRQVVYEN
GTLKLSDVQKGMDEGAYLCSVLIQPQLSISQTVYVTVKVPPLIQPFDFPPTSIGKLMYIA
CVVSSGDMPIRITWRKDGQEIVSGTSGVTIETKEFMSSLQISKVSLKHNGNYTCIASNDA
ATVSSERQLIVTVPPRFRVQPNNQDGIYGKSGVLNCSVDGYPPPKVMWKHAKGIGNPQQY
HPVPLTGRIQIMPNGSLLIRHVLEEDRGYYLCQASNGVGSDISKSMLLTVKIPAMITSHP
NTTMAIKGQNKELNCTARGEYPIIIRWERGDTVIDPDRNPRYSITTSPNEKSDEVISTLK
LKPAERGDSVFFSCHAINSYGEGRGLIQLTVQEPPDPPELEVREVKDRSMNLRWTQRFDG
NSIITSYDIEYKNKSDPWELKHATRKISPTNNQANIVELHPASVYSIRMYSYNKIGRSQA
SKELTISTEEASPDGPPMEVILQPMTSQSIRVTWKAPKKELQNGVIRGYQIGYRENGPGS
NGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLEDVPSQP
PQNVRAITVTSDEAVITWSEPPRMTLNGVLKGYRVVFWSLFPDGEWGEMQNITTVREQVE
LKGLEKFTNYSVQVLAYTQAGDGVRSNVLYIQTREDYPGPPAGIKAVPSSASSVVVSWLP
PNKPNGIIRKYTIYCSSPGSAQPAPSEYEANPEVLFYRITHLNQGQQYLIWAAAVTTAGR
GNISEKVTVEPALKAPAKILSFGGTVTTPWMKEVRLPCSSVGEPTPTIKWTKDSENTAIP
VSQDGQRNILANGTLVLRSVKAEDSGYYTCTATNTLGFDTIIVNLLVQVPPDQPRLTVST
TSTSSITLAWIPGDNGGSSIRGFVLQYSVDNTEEWRDVFITSTERSFKLDNLRCGTWYKV
KLAAKNSVGAGRISEIIEAKTHGREPQFNKDQPLLTHINSTHARLNLQGWSSGGCPINAV
LLDFRPKGTYAWQSVRTNGTTDVFLAELREATWYELKMKACNSAGCGNQTSQFATLDYDG
STIPPIKSARGEGDDVKKLFSIGSPVILVTLGMALLFIIRKKRKEKRLKRLRDAKSLAEM
LISSKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQIGEDKATIPVTDTEFSQS
VNPQSFCTGVSVHHPALIQNTGPLIDMSDIRPGTNPVSRKSVKSAHSTRNRYSSQWTLTK
CQASTPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDKGRNSMVSTESASSTYEELA
RAYEHAKLEEHLQHAKFEITECFISDSSSDQMTTGTNENADSMTSMSTPSEPGICRFTAS
PPKPQDYDRGKNVAVPIPHRANKSEYCNLPLYMKTEPFFRKQAELHDPCPVVPPREASIR
SLAARAYHTQGRHMTLDPSKQQALTLSHGGLSSLTSSGASGPASSTTTGGSSISSGTSTL
PQRTLTMPSSSSTSSAGQSTGAAGAAAGAVASSCSTGGGGVSSSSKVGGSRDSLLESSSS
GLGRLQKQSAGAYSKSYTLV
NT seq
5823 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcaacgtggctgtcttcaagtgcctcattccttcagctgtgcaggagtacgtc
agtgtggtctcctgggaaaaggacactgttgccatcgttccaggtaacaggtttttcctg
acatcatatggagccctgtacatatcagacgtgcagaaagaagatgcgctttctacttac
cgctgcattaccaaacacaaatacagtggagagacccgacagagcaacggtgctcgcctc
tctgtgatggatcctactgagtccacaccctcagtgatggacagcttccagtcaggtgaa
gtgcaggtggggcgcagtgtagagctgccatgcattgcctcaggcttccccaatcccacc
atccgctggctgaaggatggcagaccacttccggctgactcccgctggaccaggcgtctc
acaggccttaccatcagtgacctacgcatggaggattcaggcaactacatttgtgaggtc
accaacagctttggctccaaggaggtcacaggttacctcaatgtaatagagccactaagg
gtcactgtctcccctaaaaacttgaagacaggtatcagcagtacggtgatcctgtcctgc
gccgttcaaggttcccctcatttcacagtgtcctggtttcggaatacagagcctgtactg
cctgaccagcacttctccattcagggcaccaacaatgagacactcttcatcactgctgcc
cagaaaagacactcgggtgcttaccagtgctttgctacccgcaagggtcaaaccgcccag
gacttctccattatattgctggaagatggcaccccgaggatcgtctcgtccttcagcgaa
cgagtggtggcaccaggtgaacccttctccctaatgtgtgcagccaaaggcgcccctcca
cccaccataacttggaccctggatgatgagccaattgctcgggactcggcgcaccgggcc
agtcagtacacgctctcggatggctccactgtatcacacgttaacgtcagcaacccgcag
atccgcgacgggggcgtgtaccgctgcgctgcacgcaactcggccggtagcgccgagtac
caagcgcgcataaacgtaagaggacccccaagtatcagggccatgcgcaacattacagcc
gtggctgggcgcaacaccttcatcaattgtcgtgtgatcggctacccatactactccatc
aagtggtacaaagatggcatgctgttgccagacaaccatcggcaggtggtatatgagaac
ggtacactcaagctcagtgatgtgcagaaaggaatggatgagggcgcatacctgtgcagt
gtgctcatccaaccccagctctctatcagccagaccgtctatgtcactgtcaaagttccc
cctctcattcagccttttgactttccacctacttcaattggtaaactgatgtacatagca
tgtgtagtttcgtccggcgacatgcccattcggattacatggcgcaaagacggtcaggag
atcgtgtctggcacctctggtgtcaccattgagaccaaggagttcatgagctcgctacag
atctccaaagtttccttaaagcacaacggcaactacacttgcattgccagcaatgatgca
gccaccgtcagctctgaaagacagcttattgtcactgtccctcctcgtttccgagtgcag
cctaacaaccaggatgggatttatggaaagtctggggttctaaattgttctgtggatggt
tacccccctcctaaagtcatgtggaaacatgctaaaggtattggaaacccacagcagtac
cacccagttcctctgactggccgcatccagatcatgcctaatggttctcttctgatccga
catgttttggaggaggaccgtggatactatttgtgccaggccagcaatggtgtgggctca
gatatcagcaagagcatgctgcttacagtcaaaatcccagccatgatcacttcccatccg
aacacaactatggctataaaaggacagaataaagaactaaactgcactgcccggggtgag
taccctattatcattcgctgggaacgtggggacactgtcatcgaccctgaccgtaaccct
cgctactcgatcaccaccagcccgaatgagaagagtgatgaggtcatttccacgctgaag
ctgaagccagctgagcgtggggactccgtgttcttctcatgtcatgctatcaactcctat
ggagagggccgtggcctcattcagttgactgttcaagagccccctgatccgcctgagtta
gaggtgcgtgaggtaaaagatcgcagtatgaatttaagatggacccagaggtttgatgga
aatagcatcattaccagttatgatattgaatacaaaaacaaatctgatccatgggaatta
aagcatgctacacgcaaaatatccccaactaataaccaggcaaacatcgtggagctgcat
cctgcttctgtctacagcattcgtatgtactcatacaataaaatcggccgtagtcaggcc
agcaaagagctcactatcagcacagaggaggcatctcctgatgggccacccatggaggtc
attctgcagcctatgacatcacagagcatccgtgttacatggaaggctcccaagaaggag
ctccagaatggcgtaatccgtggctatcagattggctacagagaaaatgggcctggcagt
aatggccagtacagcatagtggagatgaaggcaactggtgacagtgaggtttatacacta
gataacctgaagaaatttgcccagtatggagtggttgttcaggccttcaatcgagctgga
acagggccatctagttcggagatcaatgctaccacactagaagacgtgccaagccagcca
ccacagaatgtacgggccatcaccgtgacatcagatgaagcagtgattacctggtcagag
cctccacggatgacactaaacggagttctgaaaggttaccgtgtggttttctggtccctc
ttccctgatggagaatggggggagatgcagaacattactacagtacgtgagcaagtggag
ttgaaaggcctagaaaagttcacaaactacagtgtccaagtgttggcatacacacaggca
ggggatggcgtccgcagcaatgttctctacatacaaacacgagaggactaccctggccct
ccagcaggcatcaaagctgtcccctcttctgccagcagcgttgtggtatcatggctccct
ccaaacaagccaaatggcatcatcaggaaatacaccatatattgctccagccctggatca
gcacaaccagctcccagtgaatacgaggcaaacccagaagtactgttttaccgcatcacc
catctaaatcaaggacagcagtaccttatctgggcagcagctgttaccactgccggccgg
gggaacatcagcgagaaggtcacggtggagcctgctttaaaggctcctgctaagattcta
tcttttggaggtacagttaccactccgtggatgaaggaggtacggctgccatgtagttca
gttggagagccaactcctacaattaaatggaccaaggacagcgagaacactgctattcct
gtatctcaggatggccagcggaacattttggcaaatgggacgctggtgttgcgctcagtg
aaagcagaggattctgggtactacacctgcacagccaccaatacactaggatttgatacc
ataatcgtgaatctacttgtgcaagtccctccagatcagccgcgtttaacagtctccacc
acctcaacctcctctattactctagcctggatccctggagataacggaggaagctccatc
agaggcttcgtgctgcagtactctgtggataatacagaagagtggagagatgtgttcatt
acttccactgaacgctctttcaagctggataacctacggtgtggcacgtggtataaggtc
aaactagctgccaagaacagtgtgggagctgggcggataagtgaaattattgaggcaaag
actcatggcagagaaccgcagttcaacaaggaccagccccttctcacccacatcaactcc
actcatgctcggctcaatctgcagggatggagcagtggtggctgccccatcaatgctgtg
ctgcttgacttccgccccaaaggcacttatgcctggcaaagtgtacggaccaatggcacg
accgatgttttcctggcagagttgcgtgaagccacctggtacgagctgaagatgaaggcc
tgcaacagtgctggctgtgggaaccagacctcacagtttgccacactagactacgatggc
agtaccattcccccgatcaagtctgcacgtggggaaggtgatgatgtgaagaagctgttc
tccattggctcccctgtcattttagttactttgggcatggcccttctcttcatcattcga
aagaaacgcaaagagaagaggctgaaaagacttcgagatgctaagagtttggcggaaatg
ttaatcagcagtaagaacaatcgcagttttgacaccccagtgaagggcccaccccagggg
ccacggctgcacatagatataccacgtgtacaactgcttattgaagataaggaaggcatc
aagcagatcggtgaagacaaagccaccattcctgttacggacacagagttcagccagtca
gtaaacccccagagcttctgcacaggcgtgtctgtgcatcatcctgcacttattcagaac
accggccccttaattgacatgtctgatattagaccaggaaccaatccagtgtcaaggaag
agtgttaagtcagctcacagtacaagaaatcgttactcaagccagtggaccctgacaaag
tgccaggcatccacgcctgcccgcactctaacctctgactggcgtaccgtcggctcgcag
catggtatcactgtaacagagagtgacagttatagtgccagtctgtcccaggacacagac
aagggccgtaacagcatggtttcgacggagagtgcttcttctacatatgaggaactggct
cgtgcttacgagcatgccaaactggaggagcatctacagcatgctaagttcgagatcacg
gagtgcttcatttccgacagttcttcagaccagatgaccacaggtaccaatgaaaatgcc
gacagcatgacatcaatgagcacaccgtccgagccgggcatctgccgcttcacggcatct
ccaccaaaaccacaggactatgaccgtggcaagaatgtagcagtgccaataccacaccgt
gccaacaagagtgagtactgtaatctccccctttatatgaagacagagccattcttccgc
aaacaagcagagctgcatgatccatgcccagtggtgccgccacgtgaagcttccattcga
agtttagcggctcgtgcttaccacacgcagggccgccacatgacattagacccatccaag
caacaggccctgacactcagccatggtgggttaagtagtctaaccagctcaggagcatca
ggaccagcctccagcaccactacaggtggctccagcattagctcgggcacatccacattg
ccccagaggactcttactatgcccagctcctcctccacctcttcagccggccaaagcact
ggagccgctggagctgcagctggcgccgtggccagttcttgctccacgggaggaggtggt
gtgagcagcagctctaaggttggtggttcaagagactctctgctggagagcagctcatcc
ggattgggcagactgcagaagcagagtgctggggcatattcaaagtcctacacactggtg
tag
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integrated database retrieval system
