Clarias gariepinus (North African catfish): 128533134
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Entry
128533134 CDS
T10780
Symbol
ptbp2b
Name
(RefSeq) polypyrimidine tract-binding protein 2b
KO
K14948
polypyrimidine tract-binding protein 2
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgar03041
]
128533134 (ptbp2b)
Spliceosome [BR:
cgar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
128533134 (ptbp2b)
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_occluded
RRM_8
RRM_PARP14_3
GlcNAc-1_reg
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
128533134
NCBI-ProteinID:
XP_053363336
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All DBs
Position
11:9753214..9776382
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AA seq
518 aa
AA seq
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MDGISSDVAVGVKRSSDDLLSGSLYSSANTSVKANGSDSKKLRVEDGMDNPPSRVIHIRK
LPNEVSETEVIALGLPFGKVTNILMLKGKNQAFLELGTEEAAITMVNYYTAVTPQVRNVP
VCIQYSNHKELKTDSALNQRAQAVLQAVCAVQEGGSPSSDSAGESVLIPPPSPVLRIIID
NMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLDGQNIYNS
CCTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAADGQPSVDPTMAAALGKDSTSLLGSIS
PLSAAAAAAAAAGRVALSGHSAAGAVLLASNLNDEMVTPQSLFTLFGVYGDVQRVKILYN
KKDSALIQMTDGNQAQLAMSHLNGQKMFGKIIRVTLSKHQTVQLPREGLDDQGLTKDFIS
SPLHRFKKPGSKNFQNIFPPSATLHLSNIPEKVNEEDLRLLFSNSGGTVKAFKFFQDRKM
ALLQMATVEEAIQALIDLHSYDMGRGHRLRVSFSKSTI
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggacggcatctcaagtgatgttgcagttggtgtaaagagaagttcagacgatttgctt
tctggcagtctttacagcagtgcaaacacttcagttaaagccaatggaagcgacagcaaa
aaactgagagtagaggacggcatggacaacccgccctccagagtcattcatattcgtaaa
cttccgaacgaggtttctgagacagaagtcatcgccctgggtctgccatttgggaaagtc
actaatatcctgatgctgaaaggaaaaaatcaggcatttttggagcttgggacagaagaa
gcagcgatcaccatggtgaactactacacagcggtgacccctcaagtacggaatgttcct
gtgtgtatccagtactccaaccacaaagagctcaaaacggacagtgcgcttaatcagcgt
gcccaggctgttctgcaggcagtgtgtgctgttcaagaggggggttctccgagttcagat
tcagcaggagagagcgtgttaataccaccgccaagtccagtcctgcgcattattatcgac
aacatgttctaccctgtaacactggacgtcctgcagcagattttctccaagtttgggaca
gtgatgaagataatcacattcaccaaaaataatcagttccaagctctgctgcaattcagt
gatcctgtgaatgctcagcaggccaaactgtctctggatggacagaacatctataattcg
tgctgcacactgcggatcgacttctctaagctggtcaacttgaacgtcaagtacaacaac
gataagagtcgagattacacaagacccgagctgcctgcagcagacggccagccttctgta
gatccaactatggctgctgcacttggcaaggactccacatccctacttgggtcgatcagt
cctctaagcgcagcagcagcggccgcagcagcagctgggcgagtcgctctgtcaggacac
tcagcggctggtgcagtgctgctggccagcaatctcaatgatgagatggttacgccccaa
agtctctttaccctcttcggtgtgtatggggatgtgcaacgagtcaagatactctacaat
aagaaggacagtgccctcatccagatgacagatggaaaccaggcgcagttagcaatgagc
cacctaaatgggcagaagatgtttgggaagatcatccgtgtgactctttccaaacaccag
acggtgcagcttcctcgagaaggcttggatgatcaaggcctcactaaagacttcatcagt
tcacccctccaccgattcaaaaaaccaggctcaaagaatttccagaacatcttccctcca
tctgccacactccacctctccaacatccctgagaaggtgaacgaggaggacctgagactt
ctcttctccaactctggaggcacagtgaaggccttcaagttttttcaagaccgcaagatg
gccctgctgcaaatggcgacagtggaggaggccattcaagccctgattgacctccatagc
tatgatatgggtcgtggccatcgcctcagagtctccttctcaaaatccaccatctga
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