Clarias gariepinus (North African catfish): 128533143
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Entry
128533143 CDS
T10780
Symbol
pld1a
Name
(RefSeq) phospholipase D1a isoform X1
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00564
Glycerophospholipid metabolism
cgar00565
Ether lipid metabolism
cgar01100
Metabolic pathways
cgar04144
Endocytosis
cgar04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
128533143 (pld1a)
00565 Ether lipid metabolism
128533143 (pld1a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128533143 (pld1a)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
128533143 (pld1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128533143 (pld1a)
Enzymes [BR:
cgar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
128533143 (pld1a)
Membrane trafficking [BR:
cgar04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
128533143 (pld1a)
Endosome - Golgi transport
Others
Others
128533143 (pld1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc
PLDc_2
PX
PH
PH_11
DUF3785
Motif
Other DBs
NCBI-GeneID:
128533143
NCBI-ProteinID:
XP_053363345
LinkDB
All DBs
Position
11:complement(892028..920205)
Genome browser
AA seq
1006 aa
AA seq
DB search
MSIVVESLDPRELDFDGQEGEDVDLGPGECYIPFSAVYRTVGFKEPGAQVFITTEAITAR
VLEVERFTRAMDRFNPSSQRTASRPMMAVFRIELKHGNFTWVVKRKEKHFIELHRELLRY
KTFMRIPLPSRSHTVRRKSVNKSEVRQMPMLPRGVREEITRDEQVSSRRKQLEDYLNKLL
RMATYLKYHATMEFIDVSQMSFIHDLGPKGLEGMVYKRSGGHRIPGMNCCGHSQICYRWS
KRWLVMKDSFLMYLKPDTGAVSFVLLVDKEFSIKMDFKHTETKHGVRIDNLSRSLVLKCS
SYRHARWWGQSIEDFVRKHGRAFLRTHRFESFAKEQENTPAKWYVNGKTYMEDVADALEE
AKEEIFITDWWLSPEIFLKRPVVEGNRWRLDCILKRKAQEGVRIFVMLYKEVELALGINS
EYSKRTLMHLHPNIKVMRHPDHVSSSVYLWAHHEKLVVIDQSVAFVGGIDLAYGRWDDRE
HRLTDVGSVTRSTAQDQVDGLALSGLSSVNGSRSLDLAELPKLKGVGRTRKSRFSLYRHL
HKRNLTHTNSADSEERGSMRSLLTGVGELMGNTRFWHGKDYCNFVYKDWVQLEKPFDDFI
DRYTTPRMPWHDIASAVHGKAARDVARHFIQRWNFTKIMKPKYRSLSYPFLLPKSHTTAN
ELAYQVPNCVNTRVQVLRSVADWSAGIKYHEESIHNAYIQVIAKSKHFIYIENQFFISCA
DNKQVYNKIGDAIVERIIRAHKENKKFRVYVVTPLLPGFEGDISTGGGSALQAVMHFNYR
TMNRGEYSIISQLKREMNDQWMNYISFGGLRTHAELEGRLVTELIYVHSKMLIADDTTVI
IGSANINDRSMLGRRDSEVAVIVEDTEKVASVMDGQEYQAGKFALQLRIECFKTILGAFT
DPSIDVSDPISERFYKEVWMTTASRNASIYEKVFRCLPCSLVRNLQELLSFQTKPGLDKE
DPAKAQEMLKKIRGFLVQFPLDFLSEQNLMPSVGTKEAMVPTEIWT
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgttgtggagagtttggaccctcgggagctggactttgatggccaggaaggc
gaggatgtggatttgggtcctggagagtgttacatcccattttctgctgtgtacaggacg
gtggggtttaaggaaccaggagctcaggtttttatcaccactgaggcgatcacagcgcga
gtgctggaggtggagcgattcaccagagccatggaccggtttaacccctccagccaaagg
actgcgtccaggcccatgatggctgtgttccgtatcgagttgaaacatggtaacttcacc
tgggttgtaaagaggaaggagaaacacttcatcgagttacacagagagctcctacgctac
aagaccttcatgaggattcctttaccttcacgaagtcacaccgttcgcagaaagagtgtt
aataaaagcgaggtgcgacagatgcccatgttaccccggggggtgagggaggaaatcacc
cgggacgagcaggtgtccagcagacgaaaacagttggaggattacctgaacaaactgctg
cgcatggccacgtacctcaaataccacgctaccatggagtttattgatgtgagtcagatg
tcattcattcatgacttgggccccaaaggcttagaggggatggtgtacaaacgctcggga
ggtcaccgcatccccggcatgaactgctgcggccacagccagatctgttaccgctggtcc
aagaggtggctggtgatgaaggactcgttcctcatgtacctgaagcccgacaccggcgcc
gtctccttcgttctcctggtggataaagagttcagcataaagatggacttcaaacacacg
gagaccaaacacggcgtgaggatcgacaacctgtccaggtctctggtgttaaagtgtagc
agttacagacatgcccgatggtggggacagtccatcgaggactttgtacggaaacacggc
cgggcgtttctcaggacgcaccgctttgaatcttttgcaaaagaacaggaaaacaccccg
gccaaatggtatgtaaacggaaagacttacatggaggacgtagctgatgctttggaagaa
gctaaagaggagatctttatcactgactggtggttgagtccagagattttcctgaagagg
ccggtggtggaagggaaccgctggaggcttgactgcatccttaagcgcaaagcgcaagaa
ggtgttcgtatctttgtgatgttgtataaggaagttgaactcgctctcggcatcaacagc
gaatacagcaagagaacactgatgcaccttcaccccaacatcaaggtaatgaggcatcct
gaccatgtttcctcctcagtctatctttgggctcatcatgaaaaactcgtcgtgatcgac
caatcagtggccttcgttgggggaatcgatttagcgtacggtcgctgggacgaccgcgaa
caccgactcaccgacgtcgggagtgtcactcgctccacagctcaggatcaggtggacggt
ttggcgctttcgggactctcctccgttaacggctccagatcgctcgacttggccgaactt
cccaaactgaagggcgtcggccggacgaggaaatcgcgcttcagcctgtacagacacctc
cacaaacgcaacctgactcacaccaacagcgcggacagcgaagagcgaggctccatgcgc
agccttctgactggtgtcggtgagctgatgggaaacactcggttctggcacggcaaagat
tactgcaacttcgtctataaagactgggttcagctggagaaaccgtttgatgatttcatc
gaccggtacacgactcccagaatgccttggcacgacatcgcatcggcggttcacgggaaa
gcggcgagagacgtcgcacggcattttatacagcgctggaactttacgaagatcatgaag
ccgaagtaccgctctctctcgtaccccttcttgttgcccaaatctcacaccacggctaac
gagctggcgtaccaggtgcccaactgcgtcaacactagagtgcaggtgttgaggtcagta
gctgattggtcagcaggtataaaataccacgaggagtcgatacacaacgcctacatccag
gtcatcgcaaagagcaaacacttcatctatatcgagaatcagttcttcattagctgtgct
gataacaaacaggtttacaacaagatcggagacgccatcgtcgagaggatcatcagggct
cacaaagagaataaaaagttccgtgtgtatgtggtcactcccttgctgccggggtttgag
ggtgatatctccaccggagggggcagcgcactacaggccgtcatgcacttcaactacagg
actatgaacagaggagaatactccatcatctcacagctgaagagagaaatgaatgatcag
tggatgaactacatctcgttcgggggtttaaggacacacgctgagttggagggtcgactc
gtcactgagctcatttacgtccacagcaagatgctgatcgcagacgacaccaccgtcatc
atcggttctgcgaacattaatgaccggagcatgctgggaaggagggacagtgaggtggcc
gtgatcgtggaggacacagagaaagtggcgtcggtgatggacggacaggagtaccaggcg
ggaaaatttgccctgcagctgcggatcgagtgtttcaagacgattcttggtgccttcact
gatccctcaatcgatgtgtctgatccaatcagcgagcgcttttataaagaggtttggatg
acgacggcgagcagaaacgcgtccatctacgaaaaggtgtttcgttgtcttccctgcagt
ttggtgcggaatctccaggagcttttaagcttccaaaccaaacccggtttagataaagaa
gacccagctaaagctcaggagatgctgaagaagatccgaggcttcctggttcagtttcct
ctcgacttcctgagcgagcaaaacctcatgccgtctgtcggcactaaagaagccatggtg
ccgactgagatttggacctga
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