Clarias gariepinus (North African catfish): 128533366
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Entry
128533366 CDS
T10780
Symbol
srsf1a
Name
(RefSeq) serine/arginine-rich splicing factor 1A
KO
K12890
serine/arginine-rich splicing factor 1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03040
Spliceosome
cgar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128533366 (srsf1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128533366 (srsf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgar03041
]
128533366 (srsf1a)
Spliceosome [BR:
cgar03041
]
Common components
Common spliceosomal components
SR proteins
128533366 (srsf1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
128533366
NCBI-ProteinID:
XP_053363588
LinkDB
All DBs
Position
11
Genome browser
AA seq
242 aa
AA seq
DB search
MSGVVRGPAGSNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFE
DPRDAEDAVYARDGYDYDGYRLRVEFPRSGRGMGRGGFGGAPRGRYGPPSRRSEYRVIVS
GLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGE
TAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSRSNDRSRSYSPRRGRSSPQYSPRQSRSRS
RS
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagtggtccgaggccctgccgggagcaacgactgccgcatttatgtggggaat
cttcctcctgatatccgcacaaaagacgtcgaggacgtgttttataaatacggagcgatc
cgggatattgatctgaagaaccggcgaggtggccctccgtttgcctttgttgagttcgag
gaccccagggacgctgaggatgcagtttatgctcgggatggttacgactatgatggatac
cggcttcgagtggagtttcccagaagtggacgtggtatgggacggggaggtttcggcgga
gctcccaggggcagatacggacctccatccaggcgctccgaatacagggtcattgtttca
ggtttaccaccgagcggcagttggcaagatctgaaggatcacatgcgtgaagcaggtgat
gtatgttatgctgacgttttccgagatggaacgggcgtagtggaatttgtgcgcaaagaa
gacatgacctacgctgttcgaaaactggataacactaaattccggtcacacgagggggaa
actgcatatatccgtgtaaaggtggatggcccacgtagtccaagttatggaagatcaagg
tcccggagtcgcagccgcagcaggagtcgcagccgcagcaacgaccgtagccgcagctac
tcgccgcgccgtggccgaagctccccacagtattctcctcggcagagccggtcccgctcc
cgctcctaa
DBGET
integrated database retrieval system
