Clarias gariepinus (North African catfish): 128533371
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Entry
128533371 CDS
T10780
Symbol
scn4ba
Name
(RefSeq) sodium channel, voltage-gated, type IV, beta a isoform X1
KO
K04848
voltage-gated sodium channel type IV beta
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04261
Adrenergic signaling in cardiomyocytes
cgar04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
128533371 (scn4ba)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
128533371 (scn4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgar04040
]
128533371 (scn4ba)
Ion channels [BR:
cgar04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
128533371 (scn4ba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-set
ig
Ig_3
I-set
Ig_2
T4SS_pilin
DUF6107
VEGFR1-3_N_Ig-like
Protocadherin
Motif
Other DBs
NCBI-GeneID:
128533371
NCBI-ProteinID:
XP_053363594
LinkDB
All DBs
Position
11:complement(27897967..27923916)
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AA seq
243 aa
AA seq
DB search
MDERAHRKVDMEVWRTRGSFQHRSTRSGDGVHASIVITLLIGVWCAQALEVSVGKVSSVE
VMNGSSVLLPCTYSSCIGIKNLYFNWNYNDNGTLNKLCEGVVPAEGLDVNHVMTYHDRIT
FVGSSKDSNISVVLSNVTFEDEGEYICFARNPKEKNRNHSAIFNLIVVDQLKEVDNTLTK
IIVSVIGGLIGLIIIVMVIKAVVVHFLNKAQEKNKECLVSSGNDNTENGLSGSKADNKAS
PKA
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcgtgcgcacagaaaagtggacatggaggtgtggaggactagaggatcattc
cagcacagaagcacaaggtctggtgatggggtccatgctagcatagtcatcacccttttg
attggggtatggtgtgcacaggcactggaagtatcagtggggaaggttagctcagttgag
gtgatgaatggtagctcggtccttttaccttgtacctacagtagctgtattggcatcaag
aacctgtacttcaactggaactataatgacaatgggacattgaataagctatgtgaagga
gtcgttccagctgagggtttggacgtaaaccatgtgatgacataccatgaccgcataacg
tttgtgggctccagtaaggacagtaacatctctgtcgtgctgtcgaacgtcaccttcgag
gatgagggcgagtacatttgctttgcccgcaaccccaaagagaagaaccgaaaccacagt
gccatattcaacctcatcgttgttgaccagcttaaggaagtggacaacacattgacaaaa
atcattgtgtctgtgattggagggcttatcggcttgatcatcatagtcatggtaataaag
gcagtcgtcgtccattttctcaacaaggcccaagagaaaaataaagagtgcctcgtgagt
tcaggaaatgacaacacagaaaacggcctttcaggatccaaagcagacaacaaagcatca
ccaaaggcatag
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