Clarias gariepinus (North African catfish): 128533428
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Entry
128533428 CDS
T10780
Symbol
si:ch211-11n16.2
Name
(RefSeq) zinc finger FYVE domain-containing protein 1
KO
K17603
zinc finger FYVE domain-containing protein 1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128533428 (si:ch211-11n16.2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgar01009
]
128533428 (si:ch211-11n16.2)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128533428 (si:ch211-11n16.2)
03029 Mitochondrial biogenesis [BR:
cgar03029
]
128533428 (si:ch211-11n16.2)
Protein phosphatases and associated proteins [BR:
cgar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128533428 (si:ch211-11n16.2)
Membrane trafficking [BR:
cgar04131
]
Autophagy
Other autophagy associated proteins
Others
128533428 (si:ch211-11n16.2)
Mitochondrial biogenesis [BR:
cgar03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
128533428 (si:ch211-11n16.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
GBP
MMR_HSR1
AIG1
Motif
Other DBs
NCBI-GeneID:
128533428
NCBI-ProteinID:
XP_053363665
LinkDB
All DBs
Position
11:28822189..28840503
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AA seq
651 aa
AA seq
DB search
MSEMLLKEMEEVSLSQSKEEEEESGRSFLLIDENESLQVENERHFLRKLGCNAAKGVKVL
SIFGNTGDGKSHTLNHMLFDGEDVFATSPSPASCTIGVWAAYEPHLNLIVLDTEGLLGAS
ANQNQRMRLLLKVLAVSDVVVYRTRAERLHNDMFHFLGSASAAYMKYFTPQLRALSNRCG
LDVPLSNLGPSVVVFQETSRTQLLGDDTTVPADIVLQKRFHDLDLSTEAFSAVQYVGTQT
VIPPTDFSQLRETVTKQVKSTASRAPRQPDIVFSALQALSDRFSGEIPDDKIIMYSFFPD
EYFTCPSVCLSCNIRCKNGMNHQKDRMPHMADKLCQYAHQYNNKVLICKKCYEGGREVIV
IPKTSASTDNPWFGLAKYAWSGYVLECPYCGIIYRSRQYWTGNQDPESTVVRSEVKHVWQ
GSEAFQTDHQNAAQRMLDGVNYVVQSVSEYSSGPTKAVTAWITDQVAPPYWRPNAEITKC
HGCNRDFEEAETKHHCRACGEGFCQACSTRSMPVPERGWGMNPVRVCDACHQQGEDRQTI
QVAQMEPKALVARRMTEMAQTTLNMVSTAVDYPLCFIKGVARPDYWVPDHEITQCHQCTK
AFSSSVPKHHCRACGQGVCGDCSAQCRTVPARGWDHPVRVCDACVTQLDSQ
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagatgttactgaaagagatggaagaagtgtctcttagtcagtcgaaggaggag
gaggaggagagcggacggagtttcctgctgatcgatgagaacgagagcctgcaggtcgaa
aatgaaaggcacttcctcaggaaactcggctgcaacgcggcaaaaggagttaaggtgctc
tcgatcttcggcaacaccggcgacggcaaatcgcacacgcttaaccacatgctgttcgac
ggcgaagatgtgttcgccacgtccccctctccggcttcatgcaccatcggcgtctgggcc
gcgtatgagcctcatctcaacctgatcgtgctggatacggaaggcctcctcggcgcatcc
gccaatcagaaccagagaatgcgtctgctgttaaaagtgctggccgtgtccgacgtagtc
gtgtaccgcacacgggccgagcgtctgcacaacgacatgttccatttcttaggaagtgct
tcagctgcatatatgaagtacttcactcctcagctgcgtgccctgtccaaccggtgtggc
cttgatgtaccgctctcgaatctcgggccgtcggtggtggtgttccaggagacctcgcgc
actcagctgttgggtgacgacaccacagtgccggcagacatcgttcttcagaagcgcttc
catgacctggacctgagcaccgaagccttcagcgccgtgcagtacgtaggaacgcagacc
gtcatacctccgacagacttctcccagttaagggagacagtcactaagcaggtgaagagc
acagcgtcgcgcgcccctcgccaacctgacatcgtcttcagcgccctgcaggctttaagt
gatcggttctctggtgaaatcccagatgacaaaatcattatgtactccttcttccctgac
gagtatttcacctgcccttctgtctgcctcagctgcaacattcgttgcaagaatggcatg
aatcaccagaaggacagaatgccgcatatggcagataagttgtgccagtacgctcatcag
tacaacaacaaggttctcatatgcaagaaatgctatgaggggggaagggaagtgatagtc
atccccaaaacctcagcttctactgataacccgtggtttggtctggcgaagtatgcctgg
tccgggtatgtgttggagtgtccctactgtgggatcatctaccgaagcaggcagtactgg
acggggaaccaagacccagagagcaccgtggtgcgcagtgaagtcaagcacgtctggcag
gggtcggaagctttccagacggaccatcagaacgcagctcagcgaatgctagacggggtt
aattacgttgttcagtctgtatccgagtacagctccggtcccaccaaagcggtgacggcc
tggatcacggatcaagtggctccgccgtactggagacctaacgctgaaattacaaaatgc
cacggctgtaaccgggatttcgaggaggcggagacgaagcaccactgccgtgcttgcggc
gagggtttttgtcaggcgtgctccacccgcagcatgcctgtgcccgagagaggctggggc
atgaacccggtgcgagtttgtgacgcctgtcaccagcaaggagaagatcggcaaaccatc
caggtggcgcagatggaacccaaggcacttgtggcacgcaggatgactgagatggcacag
actacactaaacatggtctccacggcagtggactacccgctctgtttcataaagggagtg
gcgagacctgactactgggttccagaccacgagatcactcagtgccaccagtgtaccaag
gcatttagctcaagcgtgcccaagcaccactgccgcgcatgtggtcagggggtgtgtggt
gattgctcagctcagtgccgcactgtgcccgctcgtggctgggaccatccggtgagggtg
tgcgatgcctgcgtcactcagttagactcccagtga
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