Clarias gariepinus (North African catfish): 128533615
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Entry
128533615 CDS
T10780
Symbol
pdgfd
Name
(RefSeq) platelet-derived growth factor D
KO
K05450
platelet derived growth factor C/D
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04010
MAPK signaling pathway
cgar04020
Calcium signaling pathway
cgar04510
Focal adhesion
cgar04540
Gap junction
cgar04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128533615 (pdgfd)
04020 Calcium signaling pathway
128533615 (pdgfd)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128533615 (pdgfd)
04540 Gap junction
128533615 (pdgfd)
09142 Cell motility
04810 Regulation of actin cytoskeleton
128533615 (pdgfd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cgar04052
]
128533615 (pdgfd)
Cytokines and neuropeptides [BR:
cgar04052
]
Cytokines
Growth factors (RTK binding)
128533615 (pdgfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
DUF6980
Motif
Other DBs
NCBI-GeneID:
128533615
NCBI-ProteinID:
XP_053363874
LinkDB
All DBs
Position
11:complement(30193394..30215936)
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AA seq
358 aa
AA seq
DB search
MWSRTAVVIWRAARLLALVCLPLVGARGAYARGAASTRRDDLFRQEEVVMVTAGGQIQSP
RYPNAYPRNLLLSWKLLAPPFTRVVLEFDGRFGLEEPENNMCRHDFVAVDDISESSTITW
GPWCGRKAPSPITSKNNMIRIRFKSDDFFVAKPGFKLCYSLLVDAPPTYLNNLETVTVVS
DEVSVPSASLSADALDNIIAGFSTVEEVFRHMNPQTWRQDLNSIYTQTHTQQYIPRSYHA
SRVNKINLDRLYEDVRLYSCTPRNFSINLREELKATNAVFFPRCLLVKRCGGNCACGTDL
WNYCTCSPAKTVSKLHEVLKFAPGPNFYKKSRASWTLEEINLQHHERCECACHTRPPR
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcgcggacggcggtggtgatctggcgggccgcgcgcctgctcgcgctcgtgtgt
ttgccgttggtcggtgcgcgaggtgcctacgcgcgtggcgcggcgagcacgcgccgagac
gatttgttccgccaggaggaagtagtcatggtgacagcaggcggccagatccagagccca
cggtacccaaacgcctacccgcgcaacctcctgttgtcatggaaactgctggccccaccc
ttcacacgcgttgtgctagagtttgatgggaggtttgggttggaggagcctgagaacaac
atgtgcagacatgattttgtggcagttgatgacatttcagaaagcagtaccatcacttgg
ggtccctggtgtggacggaaagccccaagtcccatcacatccaaaaacaacatgatcaga
ataaggttcaaatctgatgacttctttgttgccaagccaggattcaaactctgctactcc
ctgctggttgatgctcctccgacttatttgaataacttagagactgtcacagttgtgtcg
gatgaagtctctgtccctagtgcttcattatcagctgatgctttggataatatcattgcg
gggttcagtacagtggaggaggtttttcgacacatgaacccgcagacctggagacaggat
ctgaactccatctacacacaaacgcatacacagcagtacataccacgaagctaccatgcc
agccgtgtgaacaaaattaatctggatcgtctttacgaggacgtgagactgtacagctgc
acaccacgtaatttttccataaatctgcgggaggaactgaaggccaccaatgctgttttc
ttcccaagatgcctcttggtgaagcgctgtggtgggaactgtgcctgtggaacagatctt
tggaactactgcacctgtagccctgccaaaacagtcagcaagctccatgaggtgctaaag
tttgccccaggaccaaatttctacaagaaatccagagcgagctggactctcgaggaaatc
aacctgcagcatcacgagcgatgcgaatgtgcgtgtcacacgcggccacctcgatga
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