Clarias gariepinus (North African catfish): 128533616
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Entry
128533616 CDS
T10780
Name
(RefSeq) paired mesoderm homeobox protein 1-like
KO
K09329
paired mesoderm homeobox protein
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128533616
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
128533616
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
DUF6210
Motif
Other DBs
NCBI-GeneID:
128533616
NCBI-ProteinID:
XP_053363875
LinkDB
All DBs
Position
11:complement(3068301..3082328)
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AA seq
238 aa
AA seq
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MSSGYAAHVMDRAITAANLEHFSGAKKNFSVSHLLDLEDAREMAGAQAEESSAEAGTGSL
ESPGLTSGSDTAQQDNEQLNSEEKKKRKQRRNRTTFNSSQLQALERVFERTHYPDAFVRE
DLARRVNLTEARVQVWFQNRRAKFRRNERALLASKNASLLKSYSGDVTSVEQPIVPRPAP
RPSDYLSWGSSPPYSAMASYSPSCANNNTAQGVNMANSIANLRLKAKEYSMNQVPTVN
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgagttctggttatgcagcgcatgtgatggacagagcgatcaccgcggccaatctggag
catttttctggagccaagaagaatttttccgtgagccacttgctggacctggaggacgcg
cgggagatggccggagcgcaggccgaggagagcagcgcggaggcgggcacaggaagcctg
gagtccccggggctgaccagcggcagcgacactgcgcagcaagacaatgagcagctgaac
tcagaggaaaagaagaagcgtaagcagaggagaaacaggaccacgttcaacagcagtcag
ctgcaggcgctggagcgggtgttcgagaggacgcattaccccgatgccttcgtcagggag
gatctggcgcgcagggttaatctgaccgaggctcgcgtgcaggtgtggtttcagaacaga
agggctaagttccggcgtaacgagcgcgcgctgctcgcgagtaaaaacgcctccctgctc
aagtcctactccggagacgtgacgtcggtggagcagccgatcgtaccgcggccagctccg
aggccgagcgattacctgtcctggggaagctcacctccgtacagcgccatggcctcctac
tcgccgtcctgcgccaacaacaacacggcgcagggagtgaacatggccaacagcatcgcc
aacctgagactgaaggccaaggagtacagcatgaaccaggtgccgaccgtcaactga
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