Clarias gariepinus (North African catfish): 128533636
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Entry
128533636 CDS
T10780
Symbol
trpc4b
Name
(RefSeq) short transient receptor potential channel 4b
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgar04040
]
128533636 (trpc4b)
Ion channels [BR:
cgar04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128533636 (trpc4b)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank_4
Ank
Ank_3
Ank_5
PKD_channel
YVC1_C
Motif
Other DBs
NCBI-GeneID:
128533636
NCBI-ProteinID:
XP_053363897
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All DBs
Position
11:complement(6447522..6485891)
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AA seq
920 aa
AA seq
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MAQLYYGGGGGGTGRGGGGSGSASRRDRIRLRVVRAEPELSAEEKAYLSAVEKGDYGSVK
RALREAEIYFKINVNCVDPLGRTALLIAIENENLEMVELLLAHDVHVGDALLHAIRKEVV
GAVELLLNHKKPSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKMLVQKGVSVP
QPHEVRCNCSECISSSDVDSLRHSRSRLNIYRALASPSLIALSSEDPFLTAFQLSWELQE
LSKVENEFKTEYEELSYQCNRFAKDLLDQTRSSRELELILNFRDDLSLLDEEGNNDLARL
KLAIKYRQKEFVAQPNCQQLLASRWYDEFPGWRRRHWAGKFITCIFIGLLFPLFTICYLV
APKSRIGLFIRKPFFKFICHTASYLTFLFLLLLASRHIVPLDTDHQGPKPTPVEWMILPW
IIGFIWTEIKQMWDGGLQDYIHDWWNLMDFVMNSLYLATISLKLVAYIKCNEGSRSRDDW
EMWHPTLVAEAVFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLV
AFANGLNQLYFYYETTNHTCTGIRCKDQNNAFSTLFETLQSLFWSIFGLISLYVTNVEPD
HKFTEFVGATMFGTYNIISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEE
GGTLPPPFNIIPSPKSVWYLINWVKIHIFGRKLRSTETFGALGRRAAEKVRLSHQYQEVL
RNLVKRYVAAMIRDAKKEEGLTEENFKELKQDISSFRFEVLGMLKGSRMSLRGRKMLSGT
SASSHPGCLHQFKIKPVPCEVSSEPVLDPRSSLLNGSVMSLPETSSKAKHRSDISTDFGM
FQNSKRKTNHCSNTNIYAVFEDWESEIEQFDCTEEDKCEQSLTQRPIDDGNVSKSEEGAE
REPVPSETGDQSRSPSPTDT
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagctctactacggcggcggcggcggggggaccggccgcggcggcggaggcagc
gggtccgcgtcgcgccgcgaccgcatccggttgcgcgtggtgcgcgccgagcccgagctg
tcggcggaggagaaggcgtacctgagcgccgtggagaagggcgactacggcagcgtgaag
cgcgcgctgcgcgaggccgagatctacttcaagatcaacgtgaactgcgtggacccgctg
gggcgaaccgcgctgctcatcgccatcgagaacgagaacctggagatggtggagctcctg
ctggcgcacgacgtgcatgtcggggacgcgctgctccacgccatccgcaaggaggtggtg
ggagccgtggagctgctgctcaaccacaagaaacccagcggagagaaacaggttccacct
atcctgctggacaaacagttctcggagttcacccccgacattactcccatcatcctcgct
gcccacacaaacaattatgaaattattaagatgctggtgcagaaaggtgtgtcagtgcct
cagcctcatgaggtgcgctgcaactgttccgagtgcatatccagctcagatgtggacagt
ctccgacactcacgctcacgccttaacatctacagggccctggcaagtccgtcactcatc
gcactgtctagcgaggaccccttcctgaccgccttccagctcagctgggagctccaagag
cttagcaaggtggagaacgagttcaagacagaatacgaggagctgtcttatcagtgtaat
cgctttgcaaaggacctgctggaccagacacgttcctcacgtgaactggagcttatcctc
aacttccgtgacgatcttagcctcttggatgaggagggcaataatgacttagctcggctt
aaactggccatcaaatatcgacagaaagagtttgtggctcagccgaactgtcagcagctc
cttgcttcacgatggtacgatgagttccccggctggagaaggcgccactgggctggcaaa
ttcatcacatgcatcttcatcggtcttctcttccccctcttcaccatctgctacctggtg
gcgcccaaaagccgtatcggcctcttcatccgcaagccgttcttcaagttcatctgtcat
acggcatcttacctgaccttcctcttcctcctcctgctggcctcgcggcacatcgttcct
ctggatactgaccaccaaggtcccaagcccacccctgtcgagtggatgatcctcccatgg
attataggtttcatatggacagaaatcaaacagatgtgggacggtggattacaggattac
atccacgactggtggaaccttatggattttgttatgaactctctttacttggccaccatt
tcactgaagttagtcgcatatataaagtgcaatgagggctcaaggtccagggacgattgg
gaaatgtggcaccccacgctggtggccgaggctgtgttcgccatcgctaacatcttcagc
tctctacgcctcatctctctctttaccgccaattcccacctaggcccgctgcagatctca
ctgggccgaatgctgttagacatcctcaagttccttttcatctactgcctagtgcttgtg
gcattcgccaacggactcaaccagctctatttctactacgagactacaaaccatacctgc
acgggcatccgctgcaaagatcagaacaatgctttttcaacgttgtttgaaacattgcag
tctttgttctggtccatcttcggtctcatcagtttgtacgtgaccaacgttgaacctgac
cacaagttcacagaattcgtaggagccacaatgtttggcacgtataacatcatctccctg
gtggtgcttctcaacatgctcatcgccatgatgaacaactcgtatcagcacattgcagat
catgctgacattgagtggaaatttgccaggactaagttgtggatgagctacttcgaagaa
ggaggtacactgccaccacctttcaacattatccccagccccaaatccgtgtggtacctc
attaactgggttaaaattcatattttcggaaggaagttgaggagtacagaaacgtttgga
gcgttggggaggagggctgctgaaaaagtacgactgagtcaccaatatcaggaagttctg
agaaacctggtgaagaggtatgtagcagctatgatcagagatgccaagaaagaagagggg
ctcaccgaagaaaacttcaaggagttgaagcaggatatctccagtttccgctttgaggtt
ctgggaatgctaaagggcagtcgaatgtctctgcgtggacgcaaaatgctttcaggaaca
tcagcatcttcacatccgggctgtttacaccagttcaaaatcaagccagttccatgcgag
gtaagctctgaacctgtgctggatcctcggagcagcctcctcaacggctcggtcatgtcc
ttgcctgaaacatcttccaaagcgaagcacaggagtgacatttccactgacttcggtatg
ttccaaaactctaagcgaaagacaaatcactgttccaacacaaacatctatgcggtattt
gaagactgggaatcagagattgagcaatttgactgtacagaggaggacaaatgtgaacag
tccctgactcagagacctatagatgatggaaatgtgtctaagtctgaggaaggagcggaa
cgagagccagttccatctgagaccggagatcagagccgctctccttcaccgacagacaca
taa
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