KEGG   Clarias gariepinus (North African catfish): 128533897
Entry
128533897         CDS       T10780                                 
Symbol
kdm5a
Name
(RefSeq) lysine-specific demethylase 5A isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
cgar  Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cgar01009]
    128533897 (kdm5a)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cgar03036]
    128533897 (kdm5a)
Enzymes [BR:cgar01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     128533897 (kdm5a)
Protein phosphatases and associated proteins [BR:cgar01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     128533897 (kdm5a)
Chromosome and associated proteins [BR:cgar03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    128533897 (kdm5a)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID JmjN zf-C5HC2 PHD_UBR7-like PHD_JHD1 PHD_Pygo PHD_5 PHDvar_NSD KAR PHD_ash2p_like
Other DBs
NCBI-GeneID: 128533897
NCBI-ProteinID: XP_053364099
LinkDB
Position
12
AA seq 1708 aa
MAVYTEFLPPPECPVFEPSWEDFSDPLGFISKIRPIAEKSGICKIRPPQDWQPPFACDVR
NFRFTPRVQRLNELEALTRIKLNFLDEIAKFWELQGSKLRFPHVEKKILDLYLLSKIVSS
EGGFESVCKDKRWSKIAARMGFPPGKGIGSLLRSHYERILYPYELFQSGASLSGVHRLCQ
AKDEAEEVDEGIERGCEEDEEEEEEKPKEKEGKEREGLSDKSQKKEHTLPERRSRRLKSE
RENKEPKRLQIFSTSPKVVDFEIVPADDAFIKKQKHLKAQAFAIKMRPRKETLEVNFIDL
YMCMACGRGDEEDRLLLCDGCDDSYHTFCLIPPLQDVPKGDWRCPKCVAEECSKPREAFG
FEQAVREYTLQSFGEMADHFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADI
SSKDVGSGFPMRDGKRRLLGDEEDYTNSGWNLNNMPVLEQSVLAHINADISGMKVPWLYV
GMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPACAAEQLEAVMKKLAPELFDSQPDLL
HQLVTIMNPNVLTEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLP
MGRQCVAHYRRLQRYCVFSHEELLCKMAADPESLDVELAATVCRELAEVVEEETRLRQAV
QDMGLQSSEQEVFELVPDDERQCYKCKTTCFLSALTCSCSPERLVCLHHVTELCDCPFAN
KCLRFRYDVEEFPAMLYGVKSRAQSYDTWAKRVSEALSADQKNKKDLIELKVLLEDAEDR
KYPENNLFRKLREMVKEAETCSSVAQLLLNHKQRHKRERTETGRTRTKLTVEELKAFVEQ
LFRLPCVISQARQVKELLENVEDFHERSQLALADETPDSAKLQVLVELGSGLDVELPELA
RLKQELQQARWLDEVRLTLHEPHRVTLELMKRLIDSGVGLAPHHAVEKAMAELQEILTVS
ERWEDKARACLHARPRHSMATLEGIVVEAKNIPAYLPNVLALREALDKAKEWTSRVEAIQ
NGTSYAYLEQLETLLARGRSIPVRLDALPQVESQVASARAWRERTARTFLKKNSTYNLLQ
VLSPRNDIGVYGSSRSKRRRAKELMKKERGADPETLSDLDETADEERSPSAVVAAFKAQE
QHEAEAMHSLRAANLAKMSMAERIDEVRFCLCRKTAAGVMLQCELCKDWFHGACVPLPKA
GTQKKLTTGSSWQSASKESKFLCPLCQRSKRPRLETILSLLVSLQKLPVRLPEGEALQCL
TERAMSWQDRARQALATDELSSALAKLSVLSQRMVELAAREKTEKIINAELQKAAANPDL
QGHIQTFQQAGFNRTTSPRPSLDYDDEETDSDEDIRETYGYDMKDSGDLKPYLFCDEEIP
VKSEEVVSHMWPATPSFCAEHAYSSASKSCPQNPTTPRKQPRKTPLVPRSLEPPVLELSP
AAKAQLEVLMMEGDLLEVSLDETQHIWRILQATHPPSEERFLQVESEDNLLEKPLKLKVK
EMEKKRKRKLERAEQQLLLASTGMESRPKCKDIKRVLDVGGKPKKKKLKLSPEKSRELKQ
LAKRLAKEEKERKRKEKAAAKVEFGKEGLEKKKEKKILDIPSKYDWSGAEDSNDENAVCA
AKNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSCEMAENEDYICTACSRKAGGVMGVKVG
VETVVMTSAMCSTQTLSPLYQGEVQEGS
NT seq 5127 nt   +upstreamnt  +downstreamnt
atggcggtgtacacggagttcctgcctcctcccgaatgcccggtgtttgagccgagctgg
gaggatttctccgatccgctcggcttcatcagcaagatcagacctatcgcagagaaaagc
ggcatctgcaagatcagaccacctcaggactggcagcctccttttgcttgcgatgtgcgc
aacttccgtttcacaccgcgagtccagcggctcaatgagctcgaggccctcaccagaata
aagcttaactttctggatgaaattgcaaagttttgggaactccagggctctaaactgcgc
tttccacacgtggagaaaaaaatcctggacttgtacctactcagcaagattgtgtcttct
gagggaggcttcgagtctgtgtgtaaggacaagcgctggtccaagatagcagctcgcatg
ggtttcccacccgggaagggaatcggttccctgctgcgctctcactatgagaggatcctt
tacccatatgagctgttccagtctggagcttcactttctggcgtccaccggctctgtcaa
gcgaaagacgaggctgaagaggtggatgaaggaatagagcgtggctgtgaggaggacgag
gaggaggaagaagaaaagcctaaagagaaagaaggcaaagaacgggaaggtctgagcgac
aagtcacagaagaaggagcacacacttcctgaaagacgatcacgacgcctgaagtctgag
agggagaacaaagagcccaaacgcctgcagatctttagcaccagtcctaaagtggtggat
tttgagattgttccagctgatgatgctttcattaaaaagcagaagcacctgaaggctcaa
gcatttgctattaagatgcgtccacgcaaagagaccctggaggtcaattttattgacctg
tacatgtgtatggcatgtgggcggggcgatgaggaggaccgccttctgttgtgtgatggc
tgtgatgacagctaccacacattttgtctcattccaccccttcaggatgtgcccaagggt
gactggcgttgtcccaagtgtgtggcagaggagtgcagcaagccccgggaggcgtttggg
tttgagcaggctgtgcgtgagtacacacttcagagctttggagagatggcagaccatttt
aagtctgactacttcaacatgccagttcatatggttcctacagagctggtggagaaagag
ttctggaggctggtaagcagcatagaggaggatgtgatagtcgagtatggtgcagacatt
agctccaaagacgttggaagtggctttcctatgcgagatggaaaaagaaggcttttggga
gacgaggaggactacaccaactcaggctggaatctgaacaacatgccggtgctagagcag
tccgtgcttgcccacattaatgcagatatctcggggatgaaggtaccatggctttacgtc
ggcatgtgtttctcctccttctgctggcacatcgaggaccactggagctactccatcaac
tatctgcactggggtgagcctaagacctggtatggagtcccagcttgtgcggcagagcag
ctggaggcggtgatgaagaaactggcaccggagctttttgactctcagcctgatctgctg
catcaactcgtcaccatcatgaaccccaacgttctaacggagcacggcgttccagtgtat
cggaccaatcagtgcgctggagagtttgtggtgactttcccgagagcttatcacagtggc
ttcaaccagggctacaactttgctgaagctgtcaacttttgcactgccgattggctaccc
atgggtcgtcagtgtgtggctcactaccggcggctgcagcgttactgcgttttctcccat
gaggagctgctatgtaagatggcagcagaccctgagagcctggacgtggagctggcagcg
accgtgtgccgagaactcgcagaggtggtagaggaggagacacgactccgacaggctgtg
caggacatggggttacagtcctcagagcaggaagtgtttgagttggttccagatgatgag
cggcaatgttacaagtgtaaaaccacctgcttcttgtctgctctgacgtgctcgtgcagt
ccagagcgccttgtctgtctgcaccatgttacagagctctgcgactgtccttttgcaaac
aagtgcctcaggtttcggtatgatgtggaagagtttcctgccatgttgtatggggtaaag
tctcgcgcccagtcctatgacacgtgggccaaaagagtcagcgaggcgttgtcagctgat
caaaagaacaagaaagatctgatcgagctgaaggtgttgctggaggacgcagaggacagg
aagtatccagagaacaatctgttccgtaagctcagagagatggtgaaggaggcggagacc
tgctcttctgtggcccagcttctgctcaaccacaaacagagacacaaaagggagcgcaca
gagaccggtcgtacacgcaccaagctgacggtggaggagctgaaggcatttgtggagcag
ctgttccgtcttccatgcgtcatcagccaggcacggcaagtcaaagagctgctagaaaac
gtggaggattttcacgagcgctctcagctcgccctggcagatgagaccccggactcagct
aagcttcaggttctagttgagctgggctcagggcttgacgtggagcttccagagcttgca
cgattgaagcaggagctgcagcaggcccgctggctggatgaggtgcgtctcaccctgcac
gagccccaccgtgtcacgcttgagctcatgaagcgcctcattgattcgggtgtgggtctg
gccccgcaccatgctgtggagaaagccatggctgagctgcaggagatcctcactgtgtcc
gaacgctgggaagacaaggcacgggcatgtctacatgctagaccccggcacagtatggcc
acccttgaaggcatcgtagttgaggccaagaacatccctgcctatctgcctaacgttctg
gctctccgggaagccctcgacaaagccaaagaatggacatccagagtagaggccatccag
aatgggaccagttatgcttacctggaacagctagagactttgttagccaggggccgctct
attcctgtgcgtctggacgccctgccacaggtggaatctcaggtagcttcagcacgagca
tggagagagagaacagcacgcacctttcttaagaaaaactccacctacaatctgctacag
gtcttgagtccccggaatgacatcggtgtgtacggcagcagcagaagcaagcgcagacga
gctaaagagttgatgaagaaagagcgtggtgcagatccggaaaccttgagtgacctggat
gagaccgcagatgaggagcgctcaccctctgctgtggtggctgcctttaaggctcaggag
cagcatgaggcagaagccatgcactccctccgggctgccaatttggccaagatgagcatg
gctgagcgcatcgacgaggtccgcttctgcctgtgccgcaagacagccgcgggtgtgatg
ctacaatgcgagctgtgcaaagactggttccacggtgcctgtgtgcccctgcccaaagcg
ggcacgcagaagaagctgacaacaggcagcagctggcagagcgctagcaaagagtcaaag
tttttgtgtccactttgtcagcgttcaaagagaccccgacttgagactatcctctcgttg
ttagtgtccctgcagaagcttcctgtacgactgcctgagggcgaggcgctgcaatgtttg
acagagcgtgccatgagctggcaggaccgagcgcggcaggccctggccaccgacgaactc
tcctctgccctggccaagctgtctgtgctcagccagcgcatggtggagctcgcagcacgt
gaaaagacagagaagatcatcaacgcagagctgcagaaagccgctgccaatccagacctg
cagggacacattcagacattccagcaggccggattcaacaggaccacctcgccacggcca
tctttagactatgacgatgaggagacggactcggatgaggacatccgtgagacttacggc
tatgatatgaaggactcaggtgatttaaagccatacttgttctgtgatgaggagatcccc
gtgaagtcagaagaggttgtcagtcacatgtggccagccacgccctctttctgcgctgaa
catgcctactcctctgcctctaaatcctgtccccaaaatccgaccactccgcggaaacag
cccagaaagacgcccctggtgccacgcagtctggagcctcctgtgctggagttatccccg
gctgccaaggcccagctagaggtgctcatgatggagggagacctgctggaagtctctctg
gatgaaactcagcacatctggagaatcctgcaggccacgcacccaccctcagaagagcgc
ttcctgcaggtggagtcagaggacaatctgctagagaagcctttgaagctaaaagtaaag
gaaatggagaagaagagaaagaggaaactggagagagcggagcagcagttactcttggcc
tcgacaggtatggaaagccgccccaaatgcaaagacattaaaagggtactcgatgttggt
ggcaagcccaaaaagaagaaactgaagctcagcccggagaagtcacgcgagctgaagcaa
ctggccaagcgcctcgccaaagaggagaaggaaaggaagagaaaggagaaagctgcggct
aaagtcgaattcggcaaagagggtctggaaaagaagaaggagaaaaagatcctggacatc
ccctctaagtacgactggtcaggtgcagaggactccaatgatgagaacgctgtctgtgca
gctaagaattgccagagaccatgcaaggataaggtggactgggttcagtgtgacggagga
tgtgacgagtggttccaccaggtgtgtgtaggtgtctcatgcgagatggctgagaatgaa
gactacatctgcacagcttgctcacggaaagctggcggagtgatgggagtcaaagtgggc
gtagagacagtggtgatgacgtcggctatgtgtagcacacagactctttccccactgtac
caaggagaggttcaggagggcagctag

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