Clarias gariepinus (North African catfish): 128533945
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Entry
128533945 CDS
T10780
Symbol
pparaa
Name
(RefSeq) peroxisome proliferator-activated receptor alpha a
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03320
PPAR signaling pathway
cgar04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
128533945 (pparaa)
03320 PPAR signaling pathway
128533945 (pparaa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128533945 (pparaa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cgar03310
]
128533945 (pparaa)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
128533945 (pparaa)
Nuclear receptors [BR:
cgar03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
128533945 (pparaa)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
128533945
NCBI-ProteinID:
XP_053364163
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Position
12:13596315..13650014
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AA seq
483 aa
AA seq
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MSDPVLAVPWFSTMVDMPNLFNPLTSAGEVVLDSPLCGELIKEMEELEDISRSFNDDTFD
LLHLPDFQESSTSSNSSATLDVLSPASSPSPAAFGAITGQDEINASPLNLECRVCADRAS
GFHYGVHACEGCKGFFRRTIRLKLEYDKCVRNCKIQKKNRNKCQYCRFHKCLAVGMSHNA
IRFGRMPQSEKQKLRAELQIPEKEESKAQLDDWKTLASQIHESYLKQFYLNKAKARGFLT
GKTNMPPFVIHDLDTLQQAQPALVTQMLSEGMKDFALIVQGQEAEDRLFHCCQYVSVETV
TQLTEFAKAVPGFPSLDINDQVTLLKYGVHEAFFALLASCMNKDGMLVARGRGFITREFL
KSLRKPFSVMIESKFQFAMRFNALELDDSDLALFVAAIICCGDRPGLGNVSHVERIQESI
IHALRLHLQTNHADDILLFPKLLQKLADLRQLVTEHARLVQDIKETQDTSLHPLLQEIYK
DMY
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatccagtccttgcagtaccgtggttcagcaccatggtagatatgcccaatcta
ttcaacccattaacctcagcgggagaagtagtgttagatagccctctttgtggggagcta
atcaaggaaatggaggagcttgaggatatctctcgatccttcaacgatgacaccttcgac
ttgctgcatctgcctgactttcaggaatcaagcactagctccaacagttctgctactctc
gacgttttaagcccagcctctagcccgtccccagcagcctttggagccatcacagggcag
gatgagatcaacgccagccccttaaaccttgagtgccgcgtatgtgccgatcgtgcctca
ggcttccactatggagtgcatgcctgtgaggggtgtaagggtttcttcaggaggaccata
cgcctaaagctggagtatgacaagtgcgtgcgcaactgtaaaatccagaaaaagaaccgg
aacaagtgccagtactgtcgtttccacaagtgcctcgctgtaggcatgtcccacaacgcg
attcgcttcgggaggatgcctcagtcagagaagcagaagctcagagctgagctgcaaatc
cctgagaaagaggagagcaaggcacagctggatgattggaagactctggccagccaaatc
catgagtcctatcttaaacagttttatctgaacaaggctaaagcacgaggctttcttact
ggcaagaccaacatgccgccttttgtcattcatgacttggacacactacagcaggcacag
cctgctctggtcacccagatgctgagcgagggaatgaaggattttgcacttattgttcag
gggcaggaggctgaggatcgtctcttccactgctgtcagtatgtctcagttgaaacggtc
acgcagcttacagagtttgccaaggctgtgcctggcttcccaagcctcgacatcaatgac
caggtgacactgttgaagtacggcgtgcatgaagctttctttgccctgctagcctcatgc
atgaacaaggacgggatgctggtggcacggggccgcggttttattacccgtgagttcctt
aagagccttcgcaagcctttcagtgttatgatagagtccaagtttcagttcgccatgcgg
ttcaatgctctggagctggacgacagtgacctggcactgtttgtggctgctattatctgc
tgtggagaccgaccagggttgggaaacgtgtcacatgtcgaacgtattcaggaaagtatc
attcatgctctgcggctccacctgcagaccaaccacgccgacgacatcttactgttcccc
aaacttctgcagaaactagctgatctccggcagctcgtaacggagcatgctcggttggtc
caggacataaaagaaacacaggacacttctcttcatccactgcttcaggaaatttataag
gatatgtattga
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