Clarias gariepinus (North African catfish): 128533986
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Entry
128533986 CDS
T10780
Symbol
rint1
Name
(RefSeq) RAD50-interacting protein 1
KO
K20474
RAD50-interacting protein 1
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128533986 (rint1)
Membrane trafficking [BR:
cgar04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
128533986 (rint1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
CTLH
Motif
Other DBs
NCBI-GeneID:
128533986
NCBI-ProteinID:
XP_053364211
LinkDB
All DBs
Position
12:complement(13357148..13364812)
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AA seq
778 aa
AA seq
DB search
MAAPANEQSNSNNIDVCMSRIISENAAEHGSCMDYVGEVVEREIGNDLKSLRKVRGLVEK
LTAENRVLEEQVVTVSSSVPLRVSAALAAAEESRSKLETLLQRERVLSNMLQQHLQGAQS
WADSLGQTLGELDTLERHMKYLQVLSRIEELSDNIQQFLMTNSIWEAISDVENMAKLDMN
LKESGCTHLQAFLRETLHFWHKILKDKLSSDFEEVLIQLHWPIVSPPVQSLTPLANAQEL
NSQLELLGSQLISLQTSDDLISENKELPTHPGLSQTTPLSLPTQIMLQPLSKRFRYHFTG
NRQTNSLSKPEWYLTQVLMWMGHNSNFMEEKIQPIFDRAGAKVNAKVELCRGLLTLVYEK
LAQDAPRLLYDDALFCHLVDEVLQFEKELRSTHGYPNNYPGALHILLEENIFQKWLSVER
KMALEKVDAMLSAEGAWSSQYKDITDMDELKAPDCAETFMTLLLVITDRYRSLPSSRAQL
SFLALQRELVDDFRIRLNQVMKEESRQPLGARYCAILNAANYISMVLSDWGDNVFFLQLQ
QAAVSVGEEVLGALGATECGRLASLEDSLFEGLLALLERLKGDMLGRLLDAVMRDVKEKA
QPYCRDRWISLPSQSDQATMSLSSSACPMLLCLRDHLLQLQQMLCLPLFQMFWQGLAERL
DLLLYQDVILYNHFNEGGAAQLQFDMTRNLFPLFGHYCKRPENFFKHVKESCIILNLKVG
PALLLCDVLKQGEEREEEASLRPQEPTPESALNELGVYKLAPSDAQILLNLRSAWLNH
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccgcaaatgagcagagtaacagtaataacattgatgtttgtatgtccagg
ataataagtgaaaatgcagcagagcacggaagctgcatggattatgtgggtgaagtggtg
gagagagaaattggtaatgatttaaaatcactgaggaaagtcagggggcttgttgagaaa
ctgacagcagagaacagagtgttagaggagcaggtggtgactgtatcgagttcagtgcct
ttgcgtgtatcagctgcacttgctgctgcggaggagtcccggtccaaactggagacttta
ctccagagagagagagtgctgtccaacatgttacaacagcatctccagggagcgcagagc
tgggctgacagtcttggacaaacccttggagagctagacacactggagagacacatgaaa
taccttcaggtcttatctcggattgaagagctcagtgacaatattcagcagttcctgatg
actaacagcatctgggaggcaatcagtgacgtagaaaacatggccaaattagacatgaat
cttaaagagtcaggctgcacccacctccaagcattcctcagagaaacactgcacttctgg
cataagatcctgaaagacaaactttcaagtgattttgaggaggtgctgatacaactgcac
tggccaatagtgtctcctccagttcagtctctcactccactggccaacgctcaagagctc
aacagccaattggaattgctcggttctcagctcatttctttgcagacatctgatgacctt
atatcagagaataaagagctgcccacgcaccctggcttgtctcagaccacaccactctca
cttcccactcagatcatgctgcagcccctcagtaagaggtttaggtatcacttcactggg
aaccggcagaccaactctctaagcaagcctgagtggtacctgactcaggtcctcatgtgg
atggggcacaattcaaatttcatggaggagaaaattcagcccatttttgaccgtgctggt
gccaaagttaatgcgaaggtggagctgtgcagagggcttcttacactggtgtatgagaaa
ctggcccaggatgcccctaggctgctgtatgatgatgctctcttctgccatctggtggac
gaggtgctgcagtttgagaaggagctgcgctccacacacggctacccaaacaactaccct
ggagccctgcacatactgctagaggagaacatctttcagaagtggctcagtgttgagaga
aaaatggcactggagaaggtggatgccatgttgtctgcagaaggggcctggagctctcag
tacaaagacatcactgatatggatgagcttaaagccccagactgtgcagagacatttatg
accttattgcttgtcatcacagatcgatatcgttccctgccaagctctcgagctcagctt
agcttcctcgctctccaaagagagctggtggatgattttcgcatccgtctcaaccaagtc
atgaaggaagagtctcgacagccactgggtgcccgctattgtgcaatcctgaatgctgcc
aactacatatctatggttctgagtgactggggcgacaatgtgttcttcctacagctgcag
caggcagccgtgtcagtcggagaggaggtgctgggggctctcggggctacagagtgtggg
cgcctggcctccctggaggactccctatttgaaggactgcttgcactacttgagagactt
aaaggagacatgttgggccgtttactagatgcagttatgagagacgtgaaggagaaggcc
cagccttactgccgagacaggtggatctctttgccatcacagtctgaccaggctaccatg
tcactgtccagctctgcatgtcccatgctgctgtgcctgagggatcacctgctccagctg
cagcagatgttgtgcttacctctgttccagatgttttggcagggcttggccgagaggcta
gacctcctcctctatcaggatgtaattctgtataaccactttaatgaaggtggtgctgca
caactccagtttgacatgaccagaaacttgtttccattgtttggacactactgcaagaga
cctgagaacttcttcaaacatgtgaaagaatcctgcatcattctgaaccttaaggtcggc
ccggctctgttgctttgtgacgtgttgaagcagggggaggaacgagaagaagaggcctcc
ctgagaccccaggaacccacgcctgagtcagctctgaatgagctgggggtatataaactg
gcccctagtgatgcacagatcctcctgaatctgcgctctgcctggcttaaccactaa
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