Clarias gariepinus (North African catfish): 128534027
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Entry
128534027 CDS
T10780
Symbol
prdm4
Name
(RefSeq) PR domain zinc finger protein 4
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128534027 (prdm4)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
128534027 (prdm4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
Zn_ribbon_PRDM4
zf-C2H2_4
SET
zf-C2H2_jaz
zf-C2H2_6
C2CH-3rd_BIRD-IDD
zf-met
zf-H2C2_5
zf-C2H2_16
Zf-C2H2_ZNF451_C
Zap1_zf1
HypA
Zf-C2H2_ZNF451
DUF7479
Motif
Other DBs
NCBI-GeneID:
128534027
NCBI-ProteinID:
XP_053364255
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All DBs
Position
12:5942886..5951408
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AA seq
820 aa
AA seq
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MNDMNLSPVGMDQLSVPSVSASHLGLTTSPTHSHNPITTPGMPVAIPSLGPSLGPLPSAL
SLMLPMGPLADRGVMCGLPERNYTLPPPPYPHLESSYFRHILPGILSYLADRPPPQYIHP
SSLNMDATLSVPSSNPSSLDPYSGAGGHLEQGLVSIDSRQADLHQGGAHEVQLDATGLAM
ESRVNSPMSPDGMGEELATMDGVVVTADAQQPLGGRNQPHESLEGGVMTLHGPGLELPVV
MEQEHMSGRVGSGSGTGAPGSLGEALHSNGELGSGVVSVVLTGAMAAQTQLEPVSLHSSG
MGLEPVNVSPITAEVSLGPDNSLVLVNSTLQLENGTASKETMNAAFTIWCTLCERSYGSD
CPEHGPVTFIPDTPIQSRARLSLPRPVCLRVSVADEPNGVFARDTIPSRTCFGPMVGQHC
SSVELSDWTDKDTPQLWKMFHNGILEFCIVTTDEHECNWMMFVRKARTTEEQNLVAYIDN
GKLFFCTSREILPEQELLFYYSREYSRQLGVPHVPEGQICHCGKECTSFSEFKSHLGSHA
HSHSPSQEDPSHGVHSQPHPQEKLASEAPSGTSSPAWQCQAQADGQSGGGGNAQRHGRER
KFKCSMCSRAFTTSTKLNVHFMGHMGVRPHKCSYCSKAFSDPSNLRMHLRIHTGQKNFRC
SVCGKSFTQKAHVESHMVIHTGSKNIKCDHCDKTFNRKQDLKQHMYSHSLDRQITCPKCD
KQFLKTDHLKKHLNSHDGKRDFICEKCNKGFLTKYHLTRHLKICKGPKAARGAAHDEEGD
DEDGDEEEEPDEEQERDLRAADERKECDAGMAGFSSDKTL
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacatgaacctcagtccggttggcatggaccagctcagcgtgccctccgtcagt
gccagtcacctgggccttactacctcgcccactcacagccacaaccccattaccactcca
gggatgccggtcgccatccccagcctcgggccgtctctcgggcccctcccctcagcgctg
tccctgatgttacccatggggccgttggcagaccgaggagtcatgtgtggccttccggag
aggaactacaccctgcctcctccaccgtaccctcacctggagagcagctatttcagacac
atcctcccaggtattttgtcgtatttggccgaccgccccccgccgcagtacatccacccc
agcagccttaacatggacgccaccctgtccgtgcccagcagcaacccttcatccctcgac
ccctacagcggtgccggcggacatttagaacaaggcctggtgtccatagactcccggcag
gccgatctccaccagggcggcgctcacgaggtgcagctggacgccaccgggctggcgatg
gagtcccgcgtgaacagccccatgtctcccgacgggatgggagaggagctggccaccatg
gacggagtggtcgtgaccgcagacgcgcagcagcccctcggaggcaggaatcagccccac
gagagcctggagggaggcgtcatgaccctgcacggccccgggctcgagctgcccgtggtg
atggagcaggaacacatgagcggacgtgtagggagcggctcaggaaccggagctccgggt
tctctgggtgaagctctacactctaacggggagctcggctcgggcgtggtcagcgtggtg
ctcaccggcgccatggcggcgcagacgcagctggaacccgtctcgctgcacagctcaggg
atgggactggagcccgtcaacgtgtccccgatcaccgccgaggtgtctctcggcccggat
aacagtctggtcctggtgaactccacactgcagctggagaacggcactgcgagcaaggag
accatgaacgctgccttcactatttggtgcacgttatgcgagcgctcgtacggctccgac
tgtcccgaacacggacccgtcaccttcatcccggacacgcccattcagagcagagcccgc
ctctctctgccccgcccagtctgcctgcgtgtgtctgtagccgacgagcccaacggtgtg
tttgcccgggacacgattcccagcaggacctgcttcggcccgatggttggacagcactgc
agcagcgtagagctctccgactggactgataaagacacgccccaactctggaagatgttc
cacaacggcatcttggagttctgtatcgtgacgactgatgaacacgaatgcaactggatg
atgttcgtcaggaaagcgaggacaacggaggagcagaatcttgtggcgtatatagataac
gggaagctgttcttctgtacgtccagagagattctcccggagcaggagctgttgttttat
tacagcagggaatacagcagacagctgggcgtcccgcacgttccagagggtcagatctgt
cactgcggaaaagaatgcacctctttctcagagtttaaatctcacctcggcagccacgcc
cacagccacagcccctcccaggaagaccccagtcacggcgtccacagtcagccacacccc
caggagaagctggccagcgaggcccccagtggcacctcgtctccggcgtggcagtgccag
gctcaggctgacggtcagtccggcggcggcggaaacgctcaacgtcacggcagagagagg
aagtttaagtgcagcatgtgctcgcgggcgttcacaacctccactaaactcaacgtgcac
ttcatgggccacatgggtgtgaggccgcacaagtgcagctactgcagcaaagccttcagc
gacccgagcaacctcaggatgcatctgagaatccatacaggtcagaagaacttcaggtgc
agcgtgtgtgggaagtcctttacccagaaagctcatgttgagtcccacatggtcatccat
acaggatccaagaacattaagtgtgaccactgtgacaagacgttcaacaggaagcaggac
ctgaagcagcacatgtattcacactctctcgatcgccagatcacgtgcccgaagtgcgac
aagcagttcctcaaaaccgatcaccttaagaagcacctgaactcccacgacgggaaaagg
gacttcatctgtgaaaaatgcaacaagggcttcctcaccaaataccacctgacacgccac
ctaaaaatctgcaagggccccaaggcagccagaggggccgcccacgacgaggagggcgat
gatgaagacggggacgaggaagaggaaccggacgaagagcaggaaagagatttacgagcg
gcggacgagaggaaagagtgtgacgctggcatggccgggttttcctcagacaagactctg
taa
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