Clarias gariepinus (North African catfish): 128534093
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Entry
128534093 CDS
T10780
Symbol
rbm17
Name
(RefSeq) splicing factor 45
KO
K12840
splicing factor 45
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128534093 (rbm17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgar03041
]
128534093 (rbm17)
Spliceosome [BR:
cgar03041
]
Complex A
U2 snRNP components
U2 related factors
128534093 (rbm17)
Complex B
128534093 (rbm17)
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Gene cluster
GFIT
Motif
Pfam:
G-patch
RRM_1
Motif
Other DBs
NCBI-GeneID:
128534093
NCBI-ProteinID:
XP_053364365
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Position
12:complement(20267556..20278251)
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AA seq
418 aa
AA seq
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MSLYDDLGVATSDAKTEGWSKNFKLLQSQLKVKKAALTQAKTQRMRQSNVLAPVIDLKRG
SGGEERQISDTPPHAAAGMKDSAPSGFSSGDVLIPLADEYDPMFPNDYEKVVKRQREERQ
RQREQERQKEIEEREKKRKERHEGGAPSGFSRFPSEADSDEDEEYEKEKRKRSLGGAAIA
PPSSLVEKDSSASYSYEEEARQRSKAAIPPPVFEDLERPRSPPGPTSSFLANMGGTVAHK
IMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIIGDSTEKAGASSQSAADIPGFIA
GATDAKKNDVNPLTEILKCPTKVVLLRNMVGRGEVDEDLEAETKEECEKYGKVIKCVIFE
IAVVPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDLGEPV
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgtatgatgatttgggagttgccaccagcgatgcaaaaactgaaggctggtcg
aagaactttaaattgctgcagtcccagctcaaagtgaagaaagctgccctgacacaggca
aagacacagaggatgaggcagtcaaatgttctggcccctgttattgatttgaagcgggga
agcggaggagaagaacgacagatctcggacacgcctccacacgcagctgcggggatgaag
gactctgcaccttctggcttctcttcaggagacgttctgatcccgctcgctgatgaatac
gatcccatgttccccaacgattatgagaaagtggtgaaaagacaacgtgaggagcgccag
aggcagagagagcaggagcggcagaaggagattgaagagagggagaaaaaacgcaaagag
cgtcacgaaggaggcgcacccagcggtttctcccgcttcccgtcagaggcagactccgat
gaagacgaggagtatgagaaagagaaaaggaagagaagtttgggcggagccgcaatcgca
cctccctcatctctggtagagaaggactcatcagcgtcatactcgtatgaagaggaggct
cgtcagcggtccaaagcagcgattcctccccctgtttttgaggacttggagagaccgcgc
tcgcccccaggacccaccagctccttcctggcaaacatgggagggacggtggctcacaag
attatgcagaaatatggctttcgggaaggccagggcctgggaaaacatgaacaggggctg
agtacagctctgtcagtggagaagacgagcaaacggggcgggaagatcatcattggcgac
tcgacggaaaaggctggagcatccagtcagagtgcagctgatataccaggctttattgca
ggagcaacagatgcaaagaagaatgatgtcaaccctcttactgagatcctcaaatgccct
acgaaggtggtgttattgcggaacatggtgggaagaggagaagtggatgaagacctagag
gctgaaacaaaagaggaatgtgagaaatatggcaaagtcatcaagtgtgttatcttcgag
atcgcggttgtgccagatgacgaggcggtgagaatatttctggagtttgaacgggttgag
tcagccattaaagccgtggtggatctaaacggaagatactttggaggtcgagtggtcaaa
gcctgcttctataacctggacaaattccgtgtgttagatctgggagaaccggtgtga
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