Clarias gariepinus (North African catfish): 128534222
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Entry
128534222 CDS
T10780
Name
(RefSeq) leucine-rich repeat neuronal protein 3
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cgar04990
]
128534222
Domain-containing proteins not elsewhere classified [BR:
cgar04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
128534222
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
I-set
Ig_3
ig
LRR_1
fn3
Ig_2
LRR_Zer-1
Pur_ac_phosph_N
LRRNT
LRR_EndoS
Fn3_ELFN
LRRCT
Motif
Other DBs
NCBI-GeneID:
128534222
NCBI-ProteinID:
XP_053364535
LinkDB
All DBs
Position
12:complement(14687837..14700597)
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AA seq
706 aa
AA seq
DB search
MKNKSLVDYFVLAFAMANFVIAVEDKESCPKLCVCEIRPWFSPSSVYMEASTVDCNDLGL
FNLPMRLPANTQVLLLQTNNIAKIEKSLEYMPNITEIDLSQNNLSSISDINLGHLPHLLS
LHIEENWICSLPDNALSQLGNLQELYLNHNLISYISPEAFNGLHNLLRLHLNSNRLQSIS
SEWFMSLSNLDILMIGENPVASIQDMNFKPLRNLRSLVLTRMNISQIPDNALAGLDNLES
VSFYDNNFPQVPHGALKHLKNLKFLDLNKNPIGRIQKGDFMDMLHLKELGINSMPELVSI
DSFALNNLPELTKIEATNNPKLSYIHPKAFYKLPRLETLMLNSNALTAIHRITVESLPNL
REVSMHSNPIRCDCVVRWMNMNKTNIRFMEPDSLFCVEPPEYEGQHVRQIHFREMTEICL
PLISPDSLPTQVAVGKGSSLSLHCRAFAEPEPDIYWVTPYGNRILPNMVADKFYMHPEGT
LDIYDITEGEAGLYTCVAHNLVGADLKSVSVEVSGYFPQPTGSSLDVFIQSVQTNSILVS
WKTSHGSLAPNIKWYTTSNSNHPTVAFTARVPSDIRMYNLTHLTPATQYKVCVDIHNINS
KHNTKCINVTTKGLVQPVKDVEKWDTAVITMLGVLLTIISVACLLICMFLKKYHHYTELR
RCPSKTALIPEGGTQSAFTRVWFSGNGMPAAVEVKATVINVLDNSF
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgaagaataagtcattggtggattattttgttctggcttttgcaatggctaactttgtt
attgctgtggaggacaaagaaagttgtcctaaactttgtgtgtgtgagattaggccatgg
ttttcccccagctctgtttatatggaggcctctactgtggactgcaatgatttgggactt
tttaacctaccaatgagattacctgctaatacacaagttcttttactacagaccaataac
attgctaaaatcgaaaaatctttggagtacatgcccaacataactgagattgatctttca
caaaacaacttatcctcaataagtgacatcaacttaggccatcttcctcacttgttgtcc
ctgcacatagaagaaaactggatatgctctttaccagataatgcgctttcccagcttggc
aaccttcaggaactttacctaaaccacaacctcatctcctacatttcacctgaagctttc
aatggccttcacaatttgctaagactacatcttaactcgaacaggctgcagagtataagc
agtgagtggtttatgtccctgtccaatctggatattcttatgattggggaaaatcctgtt
gcttccattcaggacatgaattttaagcccttgagaaacttgcgaagtcttgtcttaacc
aggatgaacatatcccagattccagataatgcactggcaggtctggacaatttggagagc
gtctcattctatgacaacaattttcctcaagtcccccacggtgctcttaagcatctaaag
aacctgaaatttttggaccttaacaagaatccaattggaagaatacaaaagggtgacttc
atggacatgctgcatcttaaagaactaggcatcaacagcatgccagaactggtgtctatc
gatagctttgctctcaacaacctcccagagctgacaaagattgaagctaccaacaatccc
aaattatcctacattcatcccaaagccttttacaagcttcctagacttgagactctcatg
ctgaacagtaatgccctcacggcgatacacaggatcactgtagagtcactgcccaatctg
cgtgaggtcagcatgcattccaaccccattcgctgtgactgtgtagtccgctggatgaat
atgaataaaaccaacatccgcttcatggagcctgactccttgttttgtgtggaaccaccc
gagtatgaaggtcagcatgtgcgacagattcacttcagggagatgacggagatctgcctc
cctcttatctctccagacagcctgcccactcaagtggctgtgggaaaagggagctcgttg
tcactgcattgccgggcatttgccgaaccagagcctgatatctactgggttacaccttat
ggaaacaggatcctccccaacatggtggcagataagttttacatgcaccctgagggcaca
ctcgacatttatgacatcactgagggtgaagctggactttatacttgtgtggcacacaat
cttgttggtgcagatctgaagtctgtctctgtggaagtcagcggatactttccacagcct
accggtagctctctagatgtcttcatccagtctgtacagaccaactctatcctggtgtcc
tggaaaacctctcatggcagcttggcaccaaacattaagtggtatacaacatccaattcc
aaccatccaactgtggccttcacagctagggtcccatctgatataaggatgtataatctt
acacatctcactccagccacacagtacaaggtgtgtgtagacatccacaatatcaacagt
aaacacaataccaagtgtatcaatgtaacaacaaaaggattagtgcagcctgtcaaggat
gttgagaagtgggatacagcagtgatcaccatgctaggcgtgcttcttaccatcatttca
gtggcttgcctgttgatttgtatgtttctgaagaagtaccaccattatacggagcttagg
agatgcccatccaaaacagcgttgatacctgagggtggaacacagtctgcatttacaagg
gtctggttttctgggaatgggatgccggctgcagtggaagtgaaagctactgtcataaac
gtgttggacaattccttctaa
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