Clarias gariepinus (North African catfish): 128534309
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Entry
128534309 CDS
T10780
Symbol
cfap54
Name
(RefSeq) cilia- and flagella-associated protein 54
KO
K25553
cilia- and flagella-associated protein 54
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cgar03037
]
128534309 (cfap54)
Cilium and associated proteins [BR:
cgar03037
]
Motile cilia and associated proteins
Sperm associated proteins
128534309 (cfap54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
TPR_2
fn3
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
128534309
NCBI-ProteinID:
XP_053364667
LinkDB
All DBs
Position
12:13326314..13356083
Genome browser
AA seq
3013 aa
AA seq
DB search
MDPLPAAYYGALDTSNPVISAFEKDLKGFKSYIKRIRDSHTRGSLKLFDIWKKYEPRLPS
PYYEENLLDVADFLFENKFYRLSLWQGYTRYLHRYSTASLENIRDVEHFKQAFFPHGYHT
AGAKRTFRALYGECLCVFYLERERCKQPDYTWMRKLLSILAFLRIMMQAILPHESLCWLL
YNGSLYIYNICRFLMSMRHTAQALEYLQWACVCLETSIPLLTPSFLPWRATLYCSVSECY
YDGQAAVRGEVFARRALAKIDELGKLEKMSGFPSSKETKRAFKEATIKVAVMVFKRSVYE
SRKKPKGFFRLKQKANLRDGQNNPWPRTTTERILMELFEGSAAQFLALLEALWDTSRRPL
QTGIPDDPDIQEVTVELMSAGVSILSGHGSCSIRIRNESLPLSLNALVPTYSLMEMALAG
ENHISVDAAVKFVKLLFRYEQWDMFCSLSDNLVTILSSLEGHVFRKAELELTLLEAMERF
MSSQRVRLGNKDLMAEIQSDKEQSSGPISMTDELLNLVQTLHVCVCEAAQDIRPDEDLVL
DIVLFLWAKCKPVFQRAQARHYDPACYIDKKDFSEKWVQTLYLLCEVAYECELADVDPVA
VAEMTLRLASVLEGSEDSPLLTILTKDSNEGDTQQSTPVEKPTATPSMNSHAEHLEMAWM
VLEKGLECVSKGRTVCLPHDASAIADIVYLQKFNGEHLRSSGDGQVESTSSSCMRSLSMD
MHMELLGFQHRVSLKLLDIYPDDEYPEGRKKPLMQSELGQSNSLHTKRTKLERGLQEKIK
KNKISRALFLEQKALLSYKKDATNGATKKLLEEALALLEKAGVEEKQLVSAVTSAKMGSG
EQEGCKPPPAPVLLSRSNRALTFTPAPYALEEQVCWYRIYGRKVEGVNLKVRIGDCHLVG
TGEMIPSRGERLFCISGLEPNQKYVFAVAAYDAQSNLIGSSIGDTTRPVLVSLPLPLLTA
WAHLAQVAYQTGQYASAKKACNEIWSHFTLPPVADSGPCQEPVDKECSDGLAQTKLCPKT
LKLSSPLLQQLFLISIFMQTDIHIQERGLYCDALGDGSPLIWGQEARLAECERMMVAVDL
SLHLNDSSAALQAVVSCYGLLAPLIFYQIPSDHVIQVLLKCLMVLQEIPSALKHKQLVSS
IESLYHMVACITHYLAKALQAFKEDRMASLVMEQGKHLLLEMTESLQQHDRVHKLQMKTA
PEDEPSKELKALKQHEYMGTYRDSDNPAWNREADSFDHDLSGKEDPKILYKVIGSSSLRN
AFKNLMKFKRMSCFMELAALLLQKALQEDQLQLLIQWGREIFTWIKSRDESLMMFPEKPY
EKPKKDQKKFTLSIIQYGKQVNKKINGGNKKKNGSQKKCISSSNYEKEFKAVETIMKHVG
LLERHQCQRVMRKVCSDELPWRCCTNLTLAQAHLGLLRRNLQLQPLTPLQHCYSKLPLHV
FSLAHTGALVKWNSISQHPKPPELSPPNVKPIISRAKDKSQGTPYIIGEGSGESETESEQ
ETPHTQLSSDSESETNETSTRHILLNPLGTVYKASLHLRRAMVLAHRGELWTSLQWVCEV
LWDQFNTIAFLVECTQSSETPSTLTLDQFYTVFTPLLTLASELLMDMMHKLQQWKVYDEE
GEELEARPLNNGVLVDLMWMKNFVLHTLELLFYQAKWETLAHLALLYNFYTREHYTHMIT
PVLVYAQRMLLERISYFGGPSVPQPHFTYTEMVTGEKVTCRNYAGKQLLLSSSLESWHEN
AASSAASEPLELAERKRAMCVVSVPLDIEDTLRCFRNSLAKRSHTLRAFQHSRTLLMLLL
ADTQHSIEVPFCKDSCHGRVEFNIAASTAPSIGPSDLSNEDYSSVGSVYSSPLAPSHIQA
ILASYNSSLKYLQANCYNSLQIQALHDLGNLHFYNGNPKAAHLHWSKALDRSLQTTNVLE
SWDGDSWGDNVTQQPLRHAGIWGCLQGALLSAKIAQYILTSNISQRTNCCLLSAKLFKFL
LRASLPHPENDLEYSSYKLNLELIPGVNVFSGLDQTLISSIVASLGFVCHWLYTSGHHLP
ALPLLVLYQYVASKVCRHPHLTAGCRILKVKMLTELSLFADAVKEVHSLSSGEDVLLPYN
SYTKAEKALTWKKFRNEKPLMDPCNLQVLEELLNKRLSKDIMALYANKLTCRLHLARLQL
IVAMSSTIHGLPDPVTEVLETQERSSSTSSQRNLSSDESPTSSSLKTTEPEGLQLQLQNT
TFTPGQVKAQILKVVLNQLNSELFELQHIYTDPEELELAVEIRLLLSSVNLLQGKVASSA
DQAASALRLLQDSPLLQNDTNHQLPIRCPSSVLKQSSIITKHEQLHEAEADTRPQLLDMP
SEVGALERIDRSLWLRCTLALLRSLTAHIPGTVIYPGVDSSVEADRLIRQGLADAEAWGD
PDTQALLLLQGVTLNTHCGRAPEESVSMLQEAVSLLSGRNTLSLHAGLSLVKATLLLSEL
RGSDGQALYKTTQKLLQQQLKTLGECVMQKAGEGLGPLSTPGWKNIYYPQLTLLAKTTMH
LGWCLAQQAMVSDDEQHKNLCLLAQEELHSALIISQASASRDPQLEANILYLKGTVEKIL
LSIGTLRHQTVVETFLESITLAHSHSHSLKLIHMCYMEMALIYLQQWQSTLADHAEPRPP
VESDEGSDRTHVVHTDLLLFWVCLKAAAKTLEVLTNHGQLCGITTATEGPIPLISLKALA
DFALNDLLSPCGGIEEPMKVHPRSVPDVDSELKVKRCHEITWVHLSRYYKYLLNLRHIST
QRMAGQSVEEFMSPAGDSTLTLKLTQLHTFFSDHLATYKEQCVIPDPPSALILEPQTIQQ
KMSDLYPWATLNTHQLCIQWHQPTLAGSGLATEKIMLVFALKKALMSDTQPNMPAATDIE
AGHRLICTDSLKALHAQLISVCVEAEMDSTVSASTTPSMTVSLSCIQKSEHGSKSPVKDS
TSTQKQILLEKTRHICTELRNLLQPDLKGNPITEIPFEPSVQILCDLERCFNYASGATLE
DRALNDWLFSLLI
NT seq
9042 nt
NT seq
+upstream
nt +downstream
nt
atggatcctttaccagctgcatattacggcgcattagatacatctaaccccgtcatttct
gcttttgagaaggatttaaaaggatttaaatcgtatataaaaagaattcgtgactctcac
acacgagggtctttgaaactgtttgacatctggaagaaatacgagcctcgtctcccgagc
ccttattatgaggagaatctgctggacgtagcagattttctttttgagaataagttttac
agattgtccctgtggcaaggatacactcgctacctccaccggtactccactgccagcttg
gaaaacatcagagatgtggagcacttcaagcaggccttcttcccgcatggttatcatact
gcaggagcaaagcgtacgttccgtgctctgtacggggaatgcttgtgtgtattttacctg
gaacgtgagaggtgtaagcaaccagattacacttggatgcgaaaactgcttagcattcta
gcatttttgcgtatcatgatgcaggccatcctgccccatgagagcctgtgctggttgctg
tacaatggttctttatacatctataacatatgtaggttcttgatgtccatgagacatact
gcacaggctctggagtatttacagtgggcatgtgtgtgtttggagacatccatcccatta
ctaactcccagcttcctgccctggagagccacactttactgtagtgtttctgaatgttac
tatgatggccaggctgctgtgcgtggagaggtgtttgccagaagagctcttgctaaaata
gatgaattagggaagctggagaagatgagtggattcccatcatcaaaggagacaaaacgg
gcttttaaagaagccaccatcaaagtagcagtcatggtgtttaaacgctcagtgtatgaa
tctcggaagaaacctaaaggatttttccggctgaaacagaaggccaatctcagagatggc
cagaataatccatggccacgtaccaccaccgagcgcatcctaatggagctgtttgaggga
agtgctgctcagttcctggcgctgttggaggcgctgtgggacacttcccgcagacccctg
cagactgggataccagatgatcctgatatacaggaggtgacagttgaactcatgtcagct
ggcgtcagcatactatctggacatggtagctgctccattcgcatccgtaatgagagcctg
cctttgtctttgaatgcccttgttcctacttactctctcatggagatggcactagctggt
gagaatcacatttcagtggatgcagcagtgaagtttgtgaagctgctgtttagatatgaa
cagtgggacatgttttgcagtctttcagacaaccttgtgacgatactgtctagcctggag
ggacatgtcttccgtaaggctgagttggagcttactctgctggaggctatggagcgtttc
atgtccagtcaaagggttcggctgggaaacaaagacctcatggctgagattcagtctgat
aaagagcagtcttctgggccaattagcatgacagatgagctcctaaatctggtccagact
ctgcatgtgtgcgtgtgtgaggcagcccaggacatcagaccagatgaggacctggtgctg
gatattgtactgttcctctgggcaaaatgtaagcctgtgtttcagagagctcaggccaga
cactatgacccagcgtgctacatagacaaaaaggacttctcagaaaagtgggtccagacc
ctgtaccttctgtgtgaggtggcctatgagtgtgagctggctgatgtagacccggtggca
gtggctgagatgactcttagactggcctcagtgctggagggcagtgaagactcgcctctg
ctgaccatcctaacaaaagattcaaatgaaggcgatactcagcaatccacccctgtagag
aaacctacagccacacctagtatgaactcacatgcagaacatcttgagatggcttggatg
gtgttggagaaaggccttgagtgtgtatcaaaaggcaggactgtatgtctccctcatgat
gcgtctgccatcgctgacatcgtatatctacagaagtttaatggagaacatctgagatct
tctggggatggacaggttgagagtaccagcagttcatgcatgagatctctctcaatggat
atgcatatggaactattgggtttccagcacagagtatctctcaaactcttagatatctac
ccagatgatgagtatcctgaggggagaaagaaaccacttatgcagagtgaactaggacag
tcgaattctctacatacaaagagaaccaaactagaacgcggactgcaagagaagattaag
aaaaataaaatttccagagctttgtttctggaacagaaggccttactttcgtacaagaaa
gatgctactaacggagccaccaaaaagctgctagaggaggctttggcattactggagaaa
gcaggggttgaggagaaacagctggtcagcgctgttacttctgcaaaaatgggttcagga
gaacaagaaggatgcaaacctcctccagctcctgtgctgctgtcacgtagcaaccgagct
ttaactttcacaccagcaccatatgcgctagaggagcaggtttgctggtaccgtatttat
ggaagaaaagtagaaggtgttaacctgaaagtgcggattggagactgccatttggttggc
actggtgaaatgatcccttctagaggagaacgcctgttttgcataagtggcctcgagccc
aaccagaagtatgtctttgctgtggcagcctatgacgctcaaagcaacctaattggatcc
agtattggagataccaccaggccggtgctagtctccctccccctgcctctgttgacagcc
tgggcacatctggctcaggtggcctaccaaacaggccagtatgcatcagccaagaaagcc
tgcaatgagatttggagccacttcactcttccaccagtcgcagattctggaccatgtcag
gaaccagtggacaaggaatgttctgatgggcttgcccagacaaaattgtgcccaaaaaca
ttgaagctctcctctccactactgcagcagcttttcctcatctcaatcttcatgcagaca
gatatccacatccaggagaggggattatactgtgacgccctcggtgatggaagccctttg
atctggggacaggaggctagacttgcagaatgtgagagaatgatggtggctgtagatctg
tctctacatcttaatgatagcagtgctgccttgcaggctgtagtgagctgctatggcctc
ctggcaccacttatcttttatcagatcccatcagaccatgtgattcaggtgctattgaag
tgtctgatggtgctgcaggagatcccatccgcattgaaacataaacaacttgtcagttcg
attgaatcattatatcatatggtggcctgcatcacacactatttagccaaggccttgcaa
gccttcaaagaggaccgtatggcatctttagtgatggaacagggcaagcatcttctcctg
gagatgactgagagtctccagcagcatgatagggtacataaactccagatgaagactgca
ccggaggatgaacctagtaaggagttgaaggctctaaagcagcatgaatatatggggaca
tatagagacagtgataacccagcctggaacagagaagcagacagttttgatcatgacctt
agtggaaaagaggatcccaaaattctgtataaggtcattggttccagctccctcaggaat
gccttcaaaaatttgatgaagtttaaacggatgtcttgctttatggagcttgctgcgctc
ctgctacagaaagctttgcaggaagatcagttacaactgctaatacagtggggacgagaa
atcttcacttggattaagagtcgagatgaaagtctgatgatgtttcctgagaagccttat
gagaaaccgaagaaagatcagaagaagttcacgttatctatcatacagtacggtaaacaa
gttaataaaaagataaacgggggtaataaaaagaaaaatgggtctcagaaaaaatgtata
tccagctcaaactatgagaaagagttcaaggcagtggagacgataatgaaacacgttggt
ttgctggaaaggcaccagtgtcagagggtgatgaggaaggtctgctcagacgagttgcct
tggcgatgctgcactaacctgacgctggctcaagcccatctgggtctgctgcgcaggaac
ttacaacttcaaccactaacacctctccaacactgttacagcaagttgcctctgcatgtc
ttctctttggcacatactggagcacttgtgaaatggaatagtatttcccagcacccaaaa
cctcctgagttaagccctccaaacgtcaaacccatcatttctagagccaaggataaaagt
caggggacaccatacatcattggagaggggtctggggaaagtgagacggagagtgagcag
gagactccacacacacaactgtccagtgactcagaaagtgaaacaaatgaaacttctaca
cgccacatcctattgaacccactgggcacagtctacaaggcctcattacacctcaggaga
gccatggttctggcccatcgtggagaactttggacatctctacaatgggtgtgtgaggtc
ctttgggatcagtttaacactattgcatttttagtggagtgtacccaaagctctgagact
cccagtacactgacactggatcagttctatacagttttcacgccactgctgactctggct
tcagagctgctcatggacatgatgcataaactacagcaatggaaggtgtatgatgaggaa
ggtgaagagctggaggccaggcctctaaataatggagtgctggtagatctgatgtggatg
aagaactttgtgttgcacacactggagcttctcttctaccaagccaaatgggaaacactg
gctcatcttgccttgctctacaacttttatacacgggaacactacactcatatgataacc
cctgtactggtatatgctcagagaatgctgctggaaagaataagctattttggaggacct
tcagtccctcagccacacttcacctacacggaaatggtcactggagaaaaggtgacttgt
aggaactatgcaggcaagcagctgctcttaagttcaagtttggagagttggcatgagaat
gctgcaagcagtgctgcctcagaacctctggaattggcagagaggaaaagagccatgtgt
gtggtctctgtcccgctggacattgaagacactttgcgctgcttcagaaattccctggcc
aagagaagtcacacgctccgtgccttccagcacagccgcacactgctcatgcttctgcta
gctgacacacagcactcaatagaggtgccattctgtaaggattcctgtcacggcagagtg
gagtttaatatagcagccagcactgccccgtccatcggtccttcagacctatccaatgaa
gactacagctctgtgggctctgtgtacagctcgcccttagctccctcgcacatccaggcc
atcctggcctcttataacagctctctcaaataccttcaggcaaactgttataactcactg
caaattcaagctctgcatgatcttgggaacctgcatttctacaatggaaatccaaaggct
gcacatttacattggagcaaggctctggatcgctccttacagaccacaaatgtgttagaa
tcctgggatggtgattcatggggcgataacgtcactcaacagccactgaggcatgctggg
atatggggctgtctccagggagcactgctgtctgctaagattgctcaatatatcttaaca
tccaacataagccaacggacaaattgctgccttctctctgctaagctctttaagtttctc
ttgagggcgtccctgcctcatcctgaaaatgatttggaatactcttcgtacaagttgaat
ttggagctcatccctggagtgaatgttttttcagggttggatcagactctgatcagcagc
attgtggccagcctgggctttgtgtgtcactggctgtacacctcaggacatcacctccca
gcacttcctcttctggttctctaccagtatgtagccagcaaagtgtgtcgacacccacat
ctcaccgcaggatgcagaatactgaaggtaaagatgttaactgagctgagtctttttgct
gacgcagtgaaagaggtgcacagtctcagcagtggagaggacgtccttctgccttacaac
agctacactaaagcagagaaagctctgacatggaagaagtttaggaatgagaaacctctt
atggacccttgtaatcttcaggttctggaggagctgttgaacaaaagacttagtaaagac
atcatggctttgtatgccaacaaattgacctgccgccttcatctggccagacttcagctc
atcgtggccatgagtagtacgattcatggcctacctgacccagttacagaggtgttggag
acacaggaaaggagctccagtacttccagccagcgtaaccttagtagtgatgagtctccc
accagctcctcattgaagaccacagagcctgaaggcctgcaactccagctacaaaacacc
acatttactccaggacaagtcaaggctcagatactcaaagtggtcttgaaccagctcaac
tctgagctctttgaacttcagcacatctatacagaccctgaggagctggaattagctgtg
gagatcagactactactctctagtgtcaacctgctgcaggggaaagttgcttccagtgcg
gatcaggcggcatctgctctcaggttactgcaagactctccgttgctccagaatgacact
aatcatcaactgcccattagatgcccatcttctgtgcttaagcagtccagtatcataacc
aaacatgaacagctgcatgaggcagaggcagataccaggcctcagctactggacatgccc
tctgaagtgggagctttagagcgtatcgatcgctcactatggctgcgctgcacactggct
ttgctccgaagcctcactgctcacatccctggcactgtcatctacccaggtgtggacagc
agtgtggaggcagacagattgatcagacaaggcctagctgatgctgaagcttggggagac
ccggacactcaggctctgctgctccttcagggggttacgctgaacacacactgtgggagg
gcgccggaggagagcgtctctatgctgcaggaggcagttagtctgctgtctggacgaaat
accctttctctacatgccggtctgtcccttgttaaggccactctgctgctgagtgaactg
aggggatcagatggtcaagcactttacaagaccactcagaagctactgcagcagcagctg
aaaacactaggggagtgtgttatgcagaaggcaggggaaggtctggggccactctccact
ccaggttggaagaacatttattatccacagctcactctactggccaagacaaccatgcac
ttgggctggtgtttggcccagcaggccatggtgagcgacgatgagcaacataagaatctg
tgcttattggctcaggaggagcttcattctgcactcatcatctcacaagcctcagctagc
agggacccgcagctggaggctaatatcctgtacctcaaaggaactgtggaaaagatcctg
ttgtccataggcacactcagacaccagacagtggtggaaaccttcctggaaagcatcaca
ctggcccattctcatagccacagtctaaagttgatccacatgtgctatatggagatggct
ctgatttatctgcagcagtggcagagtaccctcgctgaccatgcagaacctcgaccacct
gttgaatcagacgagggttcagaccggactcatgtggtgcacactgacttacttcttttc
tgggtttgtctgaaagctgctgcaaagacattggaagttctcacaaatcatggccagttg
tgtggcattactacagcaacagaaggcccaattcctcttatatctctgaaagctcttgct
gattttgccttgaatgatctactcagtccttgtggtgggatagaggagcccatgaaagtt
caccccaggtctgttccagatgtggacagtgagctaaaagtcaaaagatgccatgagatc
acctgggtgcacctctctcgctactataaataccttctcaatctgaggcacatctccaca
caacgaatggcaggccagagtgtggaggagtttatgtctccagctggtgattcgacttta
actcttaaactcactcagttacacaccttctttagtgatcacctagcaacttacaaagag
cagtgtgttatacctgatcctccatctgccctcatactggagccccagactatacagcaa
aagatgtcagatctgtatccgtgggctacactgaatacacaccagctctgcattcagtgg
catcaacccaccctggccggctctggactagcaaccgaaaagataatgctggtctttgca
ctgaaaaaagcactgatgtctgacacacagcctaacatgccggctgccactgacatagag
gctggacacagacttatctgtacagacagtctgaaagccctccatgcccagctgatctca
gtgtgtgtggaagctgagatggattcgactgtgtctgcctctacaacacccagcatgacc
gtctctctcagctgcatacagaagagtgaacatggcagcaagagccctgttaaagacagc
accagcacacagaaacagattctgctggagaaaaccaggcatatctgtactgagctaaga
aacctgctgcaacctgatttaaagggaaatcctatcacagagataccttttgagccgagt
gttcagatcttgtgtgacctggagcgctgttttaattatgcatcaggagccactttggag
gacagagcactaaatgactggctcttctctcttcttatttga
DBGET
integrated database retrieval system
