Clarias gariepinus (North African catfish): 128534343
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Entry
128534343 CDS
T10780
Symbol
mkrn1
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-1 isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgar04121
]
128534343 (mkrn1)
Enzymes [BR:
cgar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128534343 (mkrn1)
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128534343 (mkrn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
Torus
zf-CCCH
zf_CCCH_4
zf-CCCH_2
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-rbx1
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
128534343
NCBI-ProteinID:
XP_053364710
LinkDB
All DBs
Position
12:12173062..12189121
Genome browser
AA seq
455 aa
AA seq
DB search
MAEAAAAAASTAAPATTTGGWTKHVTCRYFMHGLCKEGDNCRYSHDQGSSSSNNSSSKSA
MICKFFQKGCCAFGDRCRYEHTKPAKQEELPGPVPSVPLPAAPLTLVGDSESMPSGPAGT
SKAQDRPQSSGGVDWVNAAEFVPGQPYCGRADPVNADGPGPLIEDEYKKEQTNKELKKQL
CPYAAVGECRYGLNCAYLHGDVCDMCGLQALHPSDTAQRSQHIRACIEAHEKDMEISFAI
QRSKDMMCGVCMEVVFEKANPSERRFGILSNCNHCYCLKCIRKWRSAKQFESKIIKSCPE
CRITSNFVIPSEYWVEDKEEKQNLIQKYKDGMGTKPCRYFDEGRGTCPFGANCFYKHAFP
DGRLEEPQPQSQNQRRQNGSNTRNRGSRRTPLWDLFDERESSDSLDNDDEEMVTFELSEM
LLMLLAAGTDDDVTDSEDEWDLFHEELDDYYELYL
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagcggcggcggcagcgtctacggcggctccggcaacaacaacgggaggc
tggacgaagcacgttacctgcaggtatttcatgcacggtctttgcaaagaaggagacaac
tgtcgatactcgcatgaccaaggcagcagcagcagcaacaatagtagcagcaagtcagcc
atgatctgcaagttctttcagaaaggatgctgcgcgtttggagaccgctgcaggtatgaa
cacaccaaaccagccaaacaggaggagctccctggcccagtgccctcggtgccgcttcct
gctgcccccctcacccttgttggcgactctgagtccatgcccagtgggccagctggcacg
tctaaagcccaggataggccccaaagctctgggggagtggactgggtgaatgccgcagag
tttgtgccaggccagccctactgcggaagagcagatcccgtaaatgcggatggtccaggg
cctcttatagaggatgagtacaaaaaggaacaaaccaacaaagagctaaagaagcagctg
tgcccgtacgccgcagttggggagtgccgctatggccttaactgtgcctatctgcacggt
gacgtttgcgacatgtgcggcctgcaggcactccatccgtccgacactgctcagcgctcc
cagcacatcagagcatgtatcgaggcacatgagaaggacatggaaatctcgttcgccatc
cagcgcagtaaagacatgatgtgtggcgtatgcatggaggtggttttcgagaaggccaat
cccagtgagcgtcgctttggcatcctctccaactgcaaccactgctactgcctaaaatgc
atccgcaagtggagaagtgccaagcagtttgagagcaaaatcataaagtcctgtcctgag
tgtcgaatcacgtccaactttgtcatcccaagcgagtactgggtggaggacaaggaggaa
aagcagaatctcattcagaagtacaaggacggcatggggactaagccctgtcgctatttt
gatgagggacgcggaacctgtccatttggagctaattgcttctacaagcatgccttcccc
gatggacgcctcgaggaacctcagccccagtcccaaaaccaacgaaggcagaatggctcc
aatacaaggaacaggggctcgaggcgcacgccactctgggatctgttcgatgagcgagaa
agcagtgactccttggacaatgacgatgaggagatggtaacattcgagctaagcgagatg
ctccttatgcttctggcggcaggaaccgacgatgacgtcaccgactccgaagacgagtgg
gacttatttcacgaggagctggacgattactacgagctctacctatag
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