Clarias gariepinus (North African catfish): 128534345
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Entry
128534345 CDS
T10780
Symbol
tnpo3
Name
(RefSeq) transportin-3
KO
K15436
transportin-3
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03013
Nucleocytoplasmic transport
cgar03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128534345 (tnpo3)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
128534345 (tnpo3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgar03016
]
128534345 (tnpo3)
Transfer RNA biogenesis [BR:
cgar03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
128534345 (tnpo3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
IBN_N
Importin_rep_3
DUF429
Motif
Other DBs
NCBI-GeneID:
128534345
NCBI-ProteinID:
XP_053364712
LinkDB
All DBs
Position
12:31517508..31555218
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AA seq
923 aa
AA seq
DB search
MDGGKPSLVLVCQAVQALYHDPNPTGKERASVWLGELQRSMYAWEIADQLLQLKQDVESC
YFAAQTMKVKIQTSFYELPQETHLALRDSLLSHIENLKDLSPVIITQLALAIADLALQMP
SWKGCVHTLIEKYGNDVTAMPFLTEILTVLPEEVHSRLLRIGANRRTEIIEDLAFYSTTV
VTLLMSCVEKSGRNEMMLIKVFRCLGSWFNLGVLDSNFMATNQLLVVLFQVLQRDESPTN
LHEAASDCVCSALYAIENVDTHVALAMQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFT
ELCETFLEIIVRSPGHGMGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKTSDPA
LHGVFKPYIQRLLHSLARHCQLDPDHEGIPEDTDDFGEFRLRVSDLVKDVIFLVGSMECF
SQLYSTLKEGNPPWEVTEAVLFLMASIAKSVDPENNPTLTEVLEQVVLLPQTVHIAVRYT
SIELVGEMSEVMDRNPRFLDPVMDYLMKGLREKPLASVAAKAIHNMCSVCREHMAQHFQG
LLHIARSLDSFTLNTEAAIGLLKGTALVLARLPLEKIAECLSDLCAVQVMALKKLLSQES
SNGKSSDPTVWLDRLAVIFRHTNPFVENGQVHPCQKVIQEIWPVLSETLNKHQADNRIVE
RCCRCLRFAVRCVGKGSAALLQPLVTQMVSVYQVYPHSCFLYLGSILVDEYGNEEGCRQG
LLDMLQALCMPTFQLLEQPNGLRNHPDTVDDLFRLATRFIQRSPVTLLSSSIIVHIIQCA
IAATTLDHRDANCSVMKFVRDLIHTGVSNDHEDDFEVRKRLIAEAMHQHGQQLVTQLIHT
CCFCLPSYTLPDVAEVLWEIMVFDRPTFCRWLEVALKGLPKELTGGAVTVTHKQLTDFHK
QITSAEECKQVCWAVREFTRLYR
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggacggagggaaaccctcgctggttctggtgtgtcaggctgtacaggcgctttatcac
gacccgaatcccaccgggaaggagcgagcctcggtgtggctgggggagctgcagagatcg
atgtatgcctgggagattgcagaccagctcttacagttgaagcaggatgttgagtcgtgt
tactttgctgcacaaaccatgaaagtgaaaattcagacatcattttatgagcttccccag
gagacacacctcgccctgcgtgactctctcctctcccacatcgaaaacctcaaagacctc
tcacccgtcatcatcacacagcttgccctggcgattgctgatcttgcactgcagatgccg
tcatggaaaggctgcgttcacacccttatagagaagtacggtaatgatgtgaccgcaatg
ccttttctgactgaaatcctcacggtgctgccggaggaagtgcacagtcgattgctgagg
ataggtgctaaccggcggacagaaatcatagaggatctcgcattctattccaccacagtg
gtcactctgctgatgtcatgcgtggagaagtctggaagaaatgagatgatgctcattaaa
gtgttccgctgcttaggcagttggtttaacctgggtgtgctggacagcaacttcatggcc
actaatcagctgctggtggttctgttccaagtgctgcaaagggacgagtctcccactaac
ctgcatgaagctgcgtccgactgtgtatgttcagccctctatgccattgagaatgtagat
acacatgtggcacttgccatgcaactgttccagggtgtgttaacactagagacagcgtat
cacatggctgtggcccgagaggacctcgacaaggtgctgaattactgccgcattttcacc
gagctgtgtgagacatttctggaaattatagtcaggagtccaggacatggtatgggtgac
ctgcgcaccctggagctgctgctcatatgtgctggacatcctcaatatgaggtggtggaa
atatcctttaacttctggtaccgactgggcgagcatctgtacaagacgagcgatccggca
ctgcatggtgtattcaaaccctacatccagagactactacacagtctggcacgccactgt
cagctggacccagaccatgaaggaattccagaagacacagatgacttcggagagttcagg
ctgagggtatcagaccttgtcaaggatgttattttccttgtaggctcaatggagtgtttc
tcacagctgtattctactcttaaagaaggaaacccaccctgggaagtcactgaggctgta
cttttcctaatggcctccattgcgaagagtgtagaccctgagaacaaccccactctaaca
gaagtcctggaacaggttgtgctccttcctcagacggtgcacatcgctgtgcgctacacc
agcatcgaactggtgggggagatgagcgaggtgatggaccgcaaccctcgcttcttagac
cctgtaatggactacctaatgaaggggctgcgggagaagccactggcctcagtagcagca
aaggccattcataacatgtgctcagtgtgtcgggaacacatggcgcaacactttcagggt
ctgctccacatcgcacgctcactcgactccttcactctgaacacagaggctgccatcggc
ctgctcaagggcacagcgctggtgctggctcggctgccgctggaaaagatagcagagtgt
ctgagtgatctgtgtgctgttcaggtcatggccctgaagaagctgctttctcaggagtcc
agtaatggaaaatcatcagaccctacagtgtggttggatagactggcagtaatcttcaga
catacaaatccttttgtagagaatggacaagtgcacccctgtcaaaaagtcatccaggag
atctggcctgtgctgtcagagacattaaacaaacaccaggcggataaccgcattgtggag
cgctgctgtcgatgcctgaggtttgccgtgcgctgtgtggggaagggctcggcggcactg
ctacagcctcttgtcacgcagatggtgagtgtgtaccaggtgtacccacactcatgcttc
ctgtacttgggtagtatcctggtggacgagtatggaaatgaggagggctgtagacaaggc
ttgctggacatgttgcaggctctctgcatgcccaccttccagttactggagcagcccaat
ggccttcgcaaccaccccgacactgtggatgacctgttcagactcgctactaggtttatc
cagcgcagtccggtcacattgttaagcagcagtatcattgtccacatcatccaatgtgcc
attgcggccacgacgctggaccaccgagacgccaactgcagtgttatgaagtttgtcaga
gacctcattcacaccggggtctccaatgatcatgaagatgactttgaggtgcggaagcgt
ctgattgccgaagccatgcatcagcacggccaacagcttgtaacacagctgatacacacc
tgctgcttctgcctgccttcatacacactgcccgatgtggccgaggtgctttgggagatc
atggtgtttgaccgaccgacgttttgccgttggctagaggtggcactaaaaggccttccc
aaggagttgacgggaggagctgtaacagtcactcacaagcagctgacagatttccacaag
cagatcacaagtgcagaggagtgtaagcaggtgtgctgggcagtgagggagttcaccagg
ctttaccgatag
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