Clarias gariepinus (North African catfish): 128534473
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Entry
128534473 CDS
T10780
Symbol
optn
Name
(RefSeq) optineurin
KO
K19946
optineurin
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04137
Mitophagy - animal
cgar04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128534473 (optn)
04137 Mitophagy - animal
128534473 (optn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128534473 (optn)
Membrane trafficking [BR:
cgar04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
128534473 (optn)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
128534473 (optn)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
128534473 (optn)
Xenophagy
Cargo receptors
128534473 (optn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CC2-LZ
NEMO
zf_C2H2_10
CCDC90-like
CENP-F_leu_zip
Myb_DNA-binding_7
zf-C2H2
EDR4-like_1st
DUF4248
Motif
Other DBs
NCBI-GeneID:
128534473
NCBI-ProteinID:
XP_053364885
LinkDB
All DBs
Position
12:complement(8581004..8591740)
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AA seq
537 aa
AA seq
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MDSSSPIVNGDLSHHAQSQIAGAPNVEETLQQMNILIKENRELKEALKQTNMSMKERFEG
LSAWKEKQREERGFLEKRLEEAKQRVQALDRENELLKKHVQEMEKQHTGAEETKALMSQI
ARLQAEKNDLVAINSELQLKMSQGSPEDSFIEIRIAEGEMNVTRDLPPQKDLSASCTTKL
DMTVSRLESEEQTVSQLLQSLRVETQQKEKLQLQLQAAQKRIAELEMKELNRESETQTSL
PCVTTAQETQSKISQEESAKSASEVENLKTQLMSLFNELQQAQSKLDEAENMKKNLQDRC
KELEQDLCTLKTQLGEREQLQAENDRVKVQLESMQAANKLEQKKVQEERTAMAQLKDAYT
KLFEDYEELQQENKKRQGNVSREEYGDLQTRMAAAEQALADKQQKIDLMKQELCEKDKEL
DTVSVFKAQAEVYSSDFYAERAAREKIHEEKERLAAQLEFIKKQNIQLQDEVESMGRQSM
SEMQRRHMSRGGNPADHQGARVDWQQPVNIPEHACPKCGEVLPDLDTLQIHIMDCII
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggactcgagttcccccatagtgaacggggacctgtctcaccacgctcagtctcagatc
gccggcgcgccaaatgtggaggagacgctccagcagatgaacatcctcatcaaggagaac
cgtgagctcaaagaagctctaaagcaaaccaacatgtcgatgaaggagaggtttgagggt
ctgtctgcctggaaggagaagcagagggaggagagagggttcctggagaagcgactcgag
gaggccaaacaaagagtccaagctctggacagggagaacgagctgctgaagaaacatgtg
caggaaatggagaaacagcataccggtgcagaggagaccaaggcgttgatgagtcagatc
gcccgtctgcaggctgagaagaatgacctggtggccataaactctgaacttcagttgaag
atgagccagggttctccggaagattccttcattgagattcgcattgcagaaggtgagatg
aacgtgaccagagacttacctcctcagaaagacctttctgcatcttgcacgactaaactg
gacatgactgtgtctcgtctggaatcagaagagcagacggtgagtcagctcctgcagtct
ctgagagtcgagacgcagcaaaaagagaaactgcaactccaactacaggctgcacagaag
aggattgcagaactggagatgaaggaactcaacagagagagtgaaacccagacatctttg
ccctgcgtgaccactgcacaggaaactcagagcaagatctctcaggaggaatcagccaaa
tctgcctctgaggttgagaacctgaaaactcagctaatgagcttgtttaatgagctccag
caggcccagagtaagctggacgaggcggagaacatgaagaagaacctccaggacaggtgt
aaggagctggagcaggacctgtgcacactgaagacccagctcggggagagggagcagctg
caggctgagaacgacagagtgaaggtgcagctggagagcatgcaggctgccaacaaactg
gagcagaagaaggtccaggaggaaaggactgctatggcccagctgaaggatgcgtacacc
aagctgtttgaggattatgaagaacttcagcaggagaacaagaaacgacagggaaacgta
tcacgggaggagtacggtgatctccagaccagaatggctgcagccgagcaagctctggcg
gacaagcagcagaagatcgatttgatgaagcaggagctgtgtgagaaggacaaagagctg
gacaccgtgtctgtgtttaaggctcaggcagaggtgtattcctcagacttctacgccgaa
cgagctgcgagggagaagattcacgaggagaaagagcgcctggctgctcagctggagttc
atcaagaagcagaacatccagctacaagatgaggtggagtccatgggcaggcagtctatg
agtgagatgcagagaagacacatgtctcgtggtggaaacccagccgatcatcagggggcc
agggttgactggcagcagccggtcaatattcccgagcatgcctgtcctaaatgtggggaa
gtccttcctgacctggacactttgcaaatccacatcatggactgcatcatctga
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