Clarias gariepinus (North African catfish): 128534477
Help
Entry
128534477 CDS
T10780
Symbol
hcls1
Name
(RefSeq) src substrate protein p85-like isoform X1
KO
K06106
cortactin
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04530
Tight junction
cgar05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
128534477 (hcls1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
128534477 (hcls1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128534477 (hcls1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgar04812
]
128534477 (hcls1)
Membrane trafficking [BR:
cgar04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
128534477 (hcls1)
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
128534477 (hcls1)
Cytoskeleton proteins [BR:
cgar04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
128534477 (hcls1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HS1_rep
SH3_1
SH3_9
SH3_2
Motif
Other DBs
NCBI-GeneID:
128534477
NCBI-ProteinID:
XP_053364893
LinkDB
All DBs
Position
12:complement(4567223..4585053)
Genome browser
AA seq
576 aa
AA seq
DB search
MWKSVVGHNVNVKVASGGDDWETDPDFENDVSEQEQRWGSKTIEGSGRKEHISVADLRQK
VSKEHEVVKKKEAEGGPKASYGYGGKFGVEKDRMDKDAVGHNYVADVAQHSSQTDAAKGF
GGKFGVQKDRVDRSALGYAYKGEVEQHASQKDYSKGFGGKFGVQKERVDKAALGYDYKGE
TEKHESQKDYSKGFGGKFGVQKERVDKAALGYDYKGETEKHESQKDYSKGFGGKFGVQKE
RVDKAALGYDYKGETEKHESQKDYAKGFGGRYGVQADRVDKSAVSFNQMESPTSSYEKTQ
PLEALSSGAGKLKSRFENMAKTAEEEDRKRAEEERVRRQAREKREKEEVTKRQEVTSSEY
KEEKRRPPVIPEAVKPSQDFRPLPEVPRDSPDPVMDEPPENDYDEPPSLPPRSGDLLEED
SAPPPLPQRNIDEAEYEDLGVAHCGGEDDSAPPPLPHRNIEEAEYEDLGSAHCGGEADDS
APPPLPHRDIDEGEYEDLESAHTRATENDYEAINTGGGSGSQSARALYDYQGEADDEISF
EPDDIITNIEMVHEGWWKGSCHGRFGLFPASFVQLM
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaatctgtggtgggtcacaatgtgaacgtgaaggtggcatccgggggagacgac
tgggaaacagatcctgattttgagaatgacgtgtcggagcaggaacagaggtggggatca
aaaaccattgaaggatcgggacgcaaagagcacatcagcgtggctgatctcagacagaag
gtgtctaaggagcatgaagttgtaaagaagaaggaggcagagggcggtcctaaagcttcc
tatggatatggcgggaaattcggtgtcgagaaagacaggatggataaggatgccgtgggg
cacaactacgtggcagacgtggcgcagcactcgtcccaaacagacgcagccaagggtttc
gggggtaaattcggtgtacagaaggaccgtgtagaccggtcggctttgggttatgcgtat
aaaggggaagtcgagcaacacgcctctcaaaaagattactctaaaggctttggagggaag
ttcggcgtgcagaaggagagagtggataaggcggctctgggatacgattataaaggagag
actgagaaacacgagtctcagaaagattactctaaaggctttggagggaagttcggcgtg
cagaaggagagagtggataaggcggctctgggatacgattataaaggagagactgagaaa
cacgagtctcagaaggattactctaaaggctttggagggaagttcggcgtgcagaaggag
agagtggataaggcggctctgggatacgattataaaggagagactgagaaacacgagtct
cagaaagactacgcgaaaggtttcggaggacgttatggggtgcaggccgaccgcgtggat
aagagcgccgtctccttcaatcagatggagtctcccacgtcgtcctacgagaaaacccaa
ccgctcgaggccctgagctcaggagctggcaagctgaagtcccgctttgagaacatggcg
aagacggcggaggaggaggacaggaagcgggcggaggaggagagagtgaggagacaggca
cgagaaaagagagaaaaagaggaggtgacaaagagacaagaggtgaccagcagtgagtat
aaggaggagaaacggaggccgccagtcatccctgaagctgtgaaaccgtcacaggacttc
agaccacttcctgaagtccccagagactctcctgaccctgtgatggatgaacctcctgag
aacgactacgatgagcccccgtcactgcccccccgctctggtgatctgttagaggaggac
tcggctcctcctcctcttcctcaaagaaacattgatgaagcagaatacgaggacctgggc
gtggctcactgcggcggggaagacgactcggctcctcctcctcttcctcacaggaacatc
gaagaagcagaatacgaggacctggggtcggctcactgcggcggcgaggcagacgactcg
gctcctcctcctcttcctcacagagacatcgatgaaggagaatacgaggaccttgaatca
gctcatacccgtgctactgagaatgattatgaggctataaacacaggcggcggcagcggc
agccaatcagcccgggctctgtacgactaccagggcgaggcggatgacgagatctccttc
gagcctgatgacatcatcactaacatcgagatggtgcacgagggctggtggaagggaagc
tgtcacggccgctttggccttttcccagcatcctttgtgcagctcatgtag
DBGET
integrated database retrieval system
