Clarias gariepinus (North African catfish): 128534492
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Entry
128534492 CDS
T10780
Symbol
si:dkey-159a18.1
Name
(RefSeq) sortilin isoform X1
KO
K12388
sortilin
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
128534492 (si:dkey-159a18.1)
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GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
BNR_2
Motif
Other DBs
NCBI-GeneID:
128534492
NCBI-ProteinID:
XP_053364913
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Position
12:complement(31071175..31085725)
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AA seq
872 aa
AA seq
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MIWTLTALALACSLVCVDAEGLYGTREQRTMTFSRSSSDDQDGNFRTKRVARSLNSNFEE
CLTPVSPREFRALDSNTYETVFHGDEGSSFLLTWVGDGTGVILVLSTVGAPSFYEHGSIR
LYRSEDYGKSFHDISFTINSSFIRQDFGIAVGPGNSQKVILTAELPTAYGPGGVIFTSRD
SGKTFRSVQLPFHPAQTISYHDQNSDCLVVISTDGGLWLSLNFGNSWAKIHTGVYSFTWG
PEYILFFSYSPKGTVGADRRGDLFLRRTKDLGKTFSTIAQNIFSFGHIGGFLFTSVMESP
GSPRALYVSTDLGDRFTKAVLPTASTDQFYSVLDADDDMIFMHVDSPGDETYFGTVYTSD
DRGILFSKSLEHHLFGTSKSDFTNVTSLRGVYLTNVFEGDRVCTVITFNNGGKWWPLKKP
KNVECDTSLKRVNKSGISNHFRADGDNTFIPMFQCNLHIHGEHSQYSHISPMSLLSHPSA
VGLIIAHGSIGGALSAGDPDVYVSSDGGYNWICALSGPHHYRILDSGGLIVAVEFHKDRN
ANAIKFSTDEGQCWKTYNFTDSPIYFAGLTSEPSAKTVKISVFGYRSDENKQPTLVAVTI
DFEQLLTRECGERDYVQWLAHSDGGELNSETDGCVLGYKETFQRLKRKSVCRMGHSYVVR
KQQTACPCSREDYMCDYGYYRQENSSECVKLPEFSNRTLELCLDGELEELQTTGYRKIPS
DKCEGGFTPAHQMIPAKVHCGNSSQPSHISHQPNGLKEVWLLIVISVAVGTVALVIGIAV
TLTVQRIKYRQRSTSYQFSALQLHENELCVASDQPASSSPAVYPADSDEIKTPDQCSEKT
TTQYCHKLWTGFPELDQGFSTPLLRAHGPAQF
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgatctggacactgactgctctagctcttgcctgttccctggtgtgtgtagatgcagaa
ggcctgtatggaacgcgtgagcagagaaccatgacattctccaggtcttcatctgatgac
caggacggcaactttcgtacaaaacgggtggcgcggtctctcaattccaactttgaggaa
tgtttgactcctgtgagtcccagggagttcagggccctggacagcaacacgtatgagaca
gtctttcatggagatgagggctctagttttcttttaacatgggtaggcgatggaaccgga
gttattctggttttgtccacggttggcgctccatcgttttacgaacacggctctatccga
ctctacagaagtgaagattacggaaagtccttccatgacatctcgtttaccatcaacagt
tccttcataagacaggactttgggatcgctgtaggcccggggaactctcagaaggtgatt
ctgacagctgagctccccactgcttacggcccaggaggagttatattcacttccagggac
tcaggaaagacattccgatctgtccagctgcccttccacccggctcagaccatttcatac
catgaccagaactcagactgcctggtggtcatcagcacagacggcggtctgtggctctca
ctcaactttggtaacagctgggcgaaaatccacactggagtttattcctttacatggggc
cccgagtacattttgttcttcagttatagccctaaaggcacagtgggggcagacaggcga
ggagaccttttcctgagacgcacaaaggacctgggcaaaaccttcagtaccatcgctcag
aacatcttctccttcggacacattggaggcttcctgttcacctctgtcatggagagcccg
gggtctcctcgggcgctgtatgtgtctacagaccttggggatcggttcaccaaagccgtg
ctcccaacagcgtccacggaccagttctactcggtcctggatgctgatgatgatatgatc
ttcatgcatgtggacagtcctggagacgagacatactttgggacggtgtacacttctgat
gaccgcggcatcctgttctccaagtctcttgaacaccatctgtttggtacaagcaagagc
gactttacaaacgtgacatctctgcgaggagtatatcttaccaacgtctttgagggcgat
agagtttgcacggtcatcacattcaataacggtggaaaatggtggccactgaaaaagcca
aaaaacgtggaatgtgacacaagcttaaaaagggtaaataaatctgggattagcaaccat
ttcagagcagacggagataacacctttattcctatgtttcagtgtaacttgcacattcat
ggagagcacagccaatacagccacatttctcccatgtctcttctgtctcacccctcagct
gtcggcctgattatcgctcacggcagcataggcggcgcactttcagccggggacccggat
gtgtatgtttcctcggatggaggttacaactggatatgtgcactgagtggacctcaccac
tacagaatcctggattcaggaggcctgattgtggctgtggagtttcacaaagatagaaat
gctaatgctataaagttctccacagatgagggacaatgttggaagacctataatttcaca
gattctcccatctactttgccggccttacatctgagcccagtgctaagacggtgaagatc
agtgtgttcgggtatcggtccgatgagaataaacagcccacgctggtggcggtgacgata
gacttcgagcagcttctaaccagagaatgtggtgagcgggactacgtgcagtggttggcc
cattctgatggaggagaactcaattcagagacagatggatgtgtcttaggctacaaggaa
acttttcaaaggctgaagaggaagtccgtctgcagaatgggacacagctacgtggtccgt
aagcaacagacagcgtgtccctgctccagagaggattacatgtgtgattacggttattac
aggcaggaaaacagctctgaatgtgtgaaactgcctgagttcagtaacaggacactggag
ctctgtctggacggggagttagaggagcttcagacgacagggtatagaaagatccccagt
gataaatgtgagggtggctttacccccgctcatcaaatgattcctgccaaagtgcattgt
gggaattccagccagccttcccatatcagccatcagccgaacggactaaaggaggtgtgg
ttgctgatcgtgatcagtgttgctgtggggactgtagctctggtgatcggtattgcagta
actctaacagtccagaggataaaatacaggcagaggtcaacatcttaccaattctcagcc
cttcagctgcatgaaaatgagctctgtgttgcctctgatcagcctgcaagcagcagcccg
gccgtctacccagcggattcagacgagatcaaaactccagaccagtgctctgaaaaaaca
actacacaatattgccataaactttggactggatttcctgaactagatcaaggtttttca
actccactcctcagagcacacggccctgcacagttttaa
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