Clarias gariepinus (North African catfish): 128534617
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Entry
128534617 CDS
T10780
Symbol
cntn1b
Name
(RefSeq) contactin 1b isoform X1
KO
K06759
contactin 1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04514
Cell adhesion molecules
Brite
Cell adhesion molecules [BR:
cgar04515
]
Immunoglobulin superfamily
Contactins
128534617 (cntn1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cgar00537
]
Others
128534617 (cntn1b)
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SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128534617
NCBI-ProteinID:
XP_053365036
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Position
12:33071262..33099597
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AA seq
1026 aa
AA seq
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MEAPLMLLSFFSLLSAADAIKPRFFEPRIFDKEATGFGPIFEEEPLDTVYAEDSPETKIS
MNCRVRANPPATIKWWHNNWEIKLLEQPDEHYSLVGGNLVITNPDKNKHAGKYVCVAKNV
YGVVISKEATVRFGYLNQFPTDEREAVKVKEGQGAVLLCDPPSRYPNEVIYRWIYNEFPN
FIIPDQRRFVSQTTGNLYIAKAEASDIGNYSCFVSSPTIGKSVFSTPFALVPEIEKVKRY
PADIRVRFPKTYALVGQNVTLECFALGNPLPHIRWRKLDADLPPNYEVSMNGALLHLINV
QYEDEGSYECEALNVKGMDWYRQWLYVEGAPEWAEHINDTEKDVGSELTLSCTAVGKPLP
WIRWLKDGYSYGKGELKFSSLTFEDSGMYQCVAENNWGTIYANAELRVVSCAPTFIYNPV
KKILLGAENGRVVIECKPRAAPKPRFIWKRGSETLLNSSRVFIWDDGSLEILNVTKADDG
LYTCYAENDRGKANSSGTLSIKEATKITVAPLDVEVTVGENTILQCSASYDASFDITFIW
TVDSYIINFATDYEHYEQLMDQESSGHLLIKNIQVGHAGHYICTAQSIVDNATASAKVTV
KGRPGPPGGVRVEEIKDTSVKLVWSLGSDHGSPLIQHIVQTRDFYSIDPEDWKTAVTSPM
FLDGNAETAKVTDLFPWMEYEFRVYAINDLGAGESSVPSIKIKTWDAIPTMAPTDLDGYV
GLNGELIVTWTPMKPQYFFGKKFGYIVGFKAHEDYEWKWSTVADPEARRYVYKDGIIPNT
EIQVKVKGYNNKGEGPYSLTKVVYSSESAPSEAPLDVYARQVTSTEALVWWLHVVQVPPH
WVDGYQIRYWRKYDDNEAAASRVLVHSSVNQTRLENMRPDSHYLIEVRAYNGAGLGPPSE
HCEMFTRRPPPSRHLRVYKYVSFTRKWLYIYWDHIYNYWNESYVEGYKILFRKEGERYGK
LYTTGRHYIDFPMPETGDYVIEIRARCEGGDGPISQIQVQGSAVLNSPSLCAIALLLLLS
CMNLSP
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggaagccccacttatgttgctgagttttttctctttgctttcagcagcagatgccatc
aagcccaggttttttgagcccagaatcttcgacaaggaggccacaggttttgggcccatc
tttgaggaggagcctttagacacagtatatgctgaggattctcctgagaccaaaatctcc
atgaactgcagagtgcgagccaacccgcctgccactatcaaatggtggcacaataactgg
gagataaagctactggaacagccggatgaacattacagtttagtgggaggaaacctagtt
atcaccaatccagacaagaataagcatgctggaaaatatgtatgtgtggccaagaatgtt
tatggcgtagtcatcagcaaggaggccactgtgaggtttggatatctgaaccagtttcct
actgatgagagagaggctgtaaaagttaaagaaggtcagggggctgtcctcctgtgtgat
ccaccttcccgctacccaaatgaggtgatataccgatggatctacaatgagttccccaac
ttcattatccctgatcagaggcgctttgtgtcgcagaccacaggcaacctctacattgct
aaagcggaggcctcggacatcggaaactactcatgttttgtgtctagccctaccattggc
aaaagtgtcttcagcacacccttcgctctggtgccagagatagaaaaagtgaagcgatat
cctgcagacattcgggtcaggttccctaagacatatgccctggtggggcaaaacgtcaca
ctcgagtgcttcgccctaggaaacccccttccacatattcgctggagaaagctggatgca
gacctgccacccaactatgaggtaagcatgaacggtgccctgcttcacctgatcaatgtg
cagtacgaagatgagggtagctatgaatgtgaagccctcaacgtcaaggggatggactgg
taccgccagtggctttatgtggaaggtgctccagagtgggcagagcacatcaacgacaca
gagaaagatgttggcagtgagcttactctttcctgcacggctgtgggcaagccattaccc
tggattcgctggctgaaggatggctattcatatggcaaaggggagctgaagttctccagt
ctgacttttgaagactcaggcatgtatcagtgcgttgctgagaataactggggaaccatc
tatgctaatgcagagctgcgtgtggtctcttgtgcacctacattcatttacaacccagta
aaaaagattttgttgggagctgaaaatggccgtgtggtgatcgagtgcaagccgcgagcc
gctccaaagccaaggtttatttggaaacgtggctctgaaacactcttgaactcatcccgt
gtgtttatttgggatgacgggagtctggagattctgaacgtgactaaggctgatgatggt
ttatacacatgttacgctgagaatgatcgtggaaaggccaacagctcagggactctgagt
atcaaagaggcgaccaagatcactgttgctccattagatgtggaggtgactgtgggtgag
aacaccatcctccagtgctccgcatcgtatgatgctagctttgatatcaccttcatctgg
actgtggactcgtacattatcaactttgccactgattatgaacattatgagcagctgatg
gatcaggagtccagtggacacctgctgattaaaaacattcaagttggacatgcaggacac
tacatctgtacagcacagtccattgtagataatgcgaccgcttctgctaaagtcactgtc
aaaggtaggcctggtccacctggaggagtgcgtgtggaggagatcaaagacacatcagtc
aagttggtttggagtctgggctctgatcatggtagtccactcatccagcacattgttcaa
accagagacttttactccatagacccagaggactggaaaactgcagtcacatctcctatg
ttcttggatgggaacgctgagacagccaaggtcactgacctgtttccttggatggagtat
gaatttcgggtttacgccatcaatgatctgggagcaggagagagcagtgtgccctccatc
aaaattaaaacctgggatgccattcccaccatggctcccactgatttagatggttacgta
ggcttgaacggagaactcatagtgacttggacacccatgaagccccagtacttttttggt
aaaaagtttggctatatagtaggttttaaggcccatgaggactatgaatggaagtggtca
acagtggctgacccagaggcaagacgttatgtctacaaggatggcattatacccaacact
gaaatacaagtcaaagtgaaaggttacaacaacaaaggagaaggaccctatagcctgaca
aaagtggtctactcatctgagagtgccccttcagaggcaccactggatgtctacgcccgt
caggttacctccactgaggctctagtgtggtggctacatgttgttcaagttcctcctcac
tgggtggatggctaccagatacgctactggaggaaatatgatgacaacgaggcagcagcc
tctcgtgttctggtccacagctcggttaaccagacccgcttggagaacatgcggccagac
tctcactatcttattgaggtgcgtgcatataacggagctggactcggaccacctagtgag
cactgtgagatgtttaccaggagaccacctcccagtagacatctaagagtgtacaaatat
gtcagctttactcgcaaatggctgtatatctactgggatcacatctacaactactggaat
gagtcttacgtggagggatacaagattttgtttaggaaggaaggggagcgctatgggaaa
ctctacaccactggcaggcattacatcgacttccccatgcctgagacaggagattacgta
atcgagatacgagctcgctgtgaaggaggagacggtcctatatcacagatacaggtgcaa
ggttcagccgtcctgaactctccatctctctgtgctatagctctgctgctgctgctgtcc
tgcatgaacctgagcccttag
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